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農業生物資源研究所 平成 23 年度年報 5 研究の実施状況

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  • 農業生物資源研究所 平成 23 年度年報

    研究の実施状況

    5

    研究の実施状況

  • 農業生物資源研究所 平成 23 年度年報

    研究の実施状況

    6

    1.生物研の概要

    2.平成 23 年度の業務実施状況

    上記1と2に関しては、 生物研ホームページに掲載している 「平成 23 年度に係わる業務実績報告書」 (下記アドレス) をご参照ください。

    http://www.nias.affrc.go.jp/kouhyou/doc/H23fy_jisseki.pdf

    http://www.nias.affrc.go.jp/kouhyou/doc/H23fy_jisseki.pdf

  • 農業生物資源研究所 平成 23 年度年報

    研究の実施状況

    7

    3.研究業績一覧(1) 原著論文1. Abe H, Tomitaka Y, Shimoda T, Seo S, Sakurai T, Kugimiya S, Tsuda S, Kobayashi M (2012) Antagonistic plant defense

    system regulated by phytohormones assists interactions among vector insect, thrips and a tospovirus Plant and Cell Physiology 53(1):204-212

    2. Adachi S, Nito N, Kondo M, Yamamoto T, Arai-Sanoh Y, Ando T, Ookawa T, Yano M, Hirasawa T (2011) Identification of chromosomal regions controlling the leaf photosynthetic rate in rice by using a progeny from Japonica and high-yielding Indica varieties Plant Production Science 14(2):118-127

    3. Akagi A, Dandekar A.M, Stotz H (2011) Resistance of Malus domestica fruits to Botrytis cinerea depends on endogenous ethylene biosynthesis Phytopathology 101(11):1311-1321

    4. Akagi S, Yamaguchi D, Matsukawa K, Mizutani E, Hosoe M, Adachi N, Kubo M, Takahashi S (2011) Developmental ability of somatic cell nuclear transferred embryos aggregated at the 8-cell stage or 16- to 32-cell stage in cattle Journal of Reproduction and Development 57(4):500-506

    5. Akasaka M, Konishi S, Izawa T, Ushiki J (2011) Histological and genetic characteristics associated with the seed-shattering habit of weedy rice (Oryza sativa L.) from Okayama, Japan Breeding Science 61(2):168-173

    6. Akimoto-Tomiyama C, Furutani A, Tsuge S, Washington E.J, Nishizawa Y, Minami E, Ochiai H (2012) XopR, a type III effector secreted by Xanthomonas oryzae pv. oryzae, suppresses microbe-associated molecular pattern-triggered immunity in Arabidopsis thaliana Molecular Plant-Microbe Interactions 25(4):505-514

    7. Ando A, Shigenari A, Ota M, Sada M, Kawata H, Azuma F, Kojima-Shibata C, Nakajoh M, Suzuki K, Uenishi H, Kulski J.K, Inoko H (2011) SLA-DRB1 and -DQB1 genotyping by the PCR–SSOP–Luminex method Tissue Antigens 78(1):49-55

    8. Aoki S, Ikeda S, Takezawa T, Kishi T, Makino J, Uchihashi K, Matsunobu A, Noguchi M, Sugihara H, Toda S (2011) Prolonged effect of fluid flow stress on the proliferative activity of mesothelial cells after abrupt discontinuation of fluid streaming Biochemical and Biophysical Research Communications 416(3-4):391-396

    9. Aoki S, Makino J, Nagashima A, Takezawa T, Nomoto N, Uchihashi K, Matsunobu A, Sanai T, Sugihara H, Toda S (2011) Fluid flow stress affects peritoneal cell kinetics: Possible pathogenesis of peritoneal fibrosis Peritoneal Dialysis International 31(4):466-476

    10. Aoki T, Scandiani M.M, O’Donnell K (2012) Phenotypic, molecular phylogenetic, and pathogenetic characterization of Fusarium crassistipitatum sp. nov., a novel soybean sudden death syndrome pathogen from Argentina and Brazil Mycoscience 53(3):167-186

    11. Arakawa T, Namba O, Tateishi K (2011) Effects of coadministration of chemical insecticides with nucleopolyhedrovirus SpltNPV on the dietary intake of the common cutworm Spodoptera litura (Lepidoptera: Noctuidae) Applied Entomology and Zoology 46(3):399-405

    12. Arakawa T, Yukuhiro F, Noda H (2011) Subacute and delayed toxicity of iminoctadine liquid formulation, which contains iminoctadine triacetate as an antifungal component on a nontarget domesticated insect, the silkworm, Bombyx mori L. (Lepidoptera: Bombycidae) Pesticide Biochemistry and Physiology 100(3):239-243

    13. Araki M, Numaoka A, Kawase M, Fukunaga K (2011) Origin of waxy common millet, Panicum miliaceum L. in Japan Genetic Resources and Crop Evolution 59(7):1303-1308

    14. 荒谷恵梨子 , 亀田恒徳 , 玉田靖 , 小島桂 (2012) 透析過程におけるシルクフィブロインのゲル化の制御 日本シルク学会誌 20:85-87

    15. Asano K, Yamasaki M, Takuno S, Miura K, Katagiri S, Ito T, Doi K, Wu J, Ebana K, Matsumoto T, Innan H, Kitano H, Ashikari M, Matsuoka M (2011) Artificial selection for a green revolution gene during japonica rice domestication Proceedings of the National Academy of Sciences of the United States of America 108(27):11034-11039

    16. 浅野昌司 , 宮本和久 , 和田早苗 , 三橋渡 (2011) BT 剤の紫外線安定性に及ぼす展着剤の影響 茨城県病害虫研究会会報 (50):27-32

    17. Asano T, Hayashi N, Kobayashi M, Aoki N, Miyao A, Mitsuhara I, Ichikawa H, Komatsu S, Hirochika H, Kikuchi S, Ohsugi R (2012) A rice calcium-dependent protein kinase OsCPK12 oppositely modulates salt-stress tolerance and blast disease resistance The Plant Journal 69(1):26-36

    18. Asaoka K (2011) Effects of food source and experience on meal characteristics in the feeding behavior of the monophagous caterpillar, Bombyx mori International Journal of Wild Silkmoth and Silk 16:69-75

    19. Ashikawa I, Hayashi N, Abe F, Wu J, Matsumoto T (2012) Characterization of the rice blast resistance gene Pik cloned from Kanto51 Molecular Breeding 30(1):485-494

    20. Aslam A.F.M, Kiya T, Mita K, Iwami M (2011) Identification of novel bombyxin genes from the genome of the silkmoth Bombyx mori and analysis of their expression Zoological Science 28(8):609-616

    21. Aya K, Suzuki G,Suwabe K, Hobo T, Takahashi H, Shiono K, Yano K, Tsutsumi N, Nakazono M, Nagamura Y, Matsuoka M, Watanabe M (2011) Comprehensive network analysis of anther-expressed genes in rice by the combination of 33 laser microdissection and 143 spatiotemporal microarrays PLoS ONE 6(10):e26162

    22. Bahrini I, Ogawa T, Kobayashi F, Kawahigashi H, Handa H (2011) Overexpression of the pathogen-inducible wheat TaWRKY45 gene confers disease resistance to multiple fungi in transgenic wheat plants Breeding Science 61(4):319-326

  • 農業生物資源研究所 平成 23 年度年報

    研究の実施状況

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    23. Bahrini I, Sugisawa M, Kikuchi R, Ogawa T, Kawahigashi H, Ban T, Handa H (2011) Characterization of a wheat transcription factor, TaWRKY45, and its effect on Fusarium head blight resistance in transgenic wheat plants Breeding Science 61(2):121-129

    24. Bashir K, Ishimaru Y, Shimo H, Kakei Y, Senoura T, Takahashi R, Sato Y, Sato Y, Uozumi N, Nakanishi H, Nishizawa N.K (2011) Rice phenolics efflux transporter 2 (PEZ2) plays an important role in solubilizing apoplasmic iron Soil Science & Plant Nutrition 57(6):803-812

    25. Ben Hamouda A, Tanaka S, Ben Hamouda M.H, Bouain A (2011) Density-dependent phenotypic plasticity in body coloration and morphometry and its transgenerational changes in the migratory locust, Locusta migratoria Journal of Entomology and Nematology 3(7):105-116

    26. Boerjan B, De Loof A, Tanaka S, Schoofs L (2011) Dispersion of peptides in vegetable oil as a simple slow release formula for both injection and oral uptake in insects: A case study with [His7]-corazonin in an albino Locusta migratoria deficient in corazonin Peptides 32(7):1536-1539

    27. Bogdanove A.J, Koebnik R, Lu H, Furutani A, Angiuoli S.V, Patil P.B, Van Sluys M-A, Ryan R.P, Meyer D.F, Han S-W, Aparna G, Rajaram M, Delcher A.L, Phillippy A.M, Puiu D, Schatz M.C, Shumway M, Sommer D.D, Trapnell C, Benahmed F, Dimitrov G, Madupu R, Radune D, Sullivan S, Jha G, Ishihara H, Lee S-W, Pandey A, Sharma V, Sriariyanun M, Szurek B, Vera-Cruz C.M, Dorman K.S, Ronald P.C, Verdier V, Dow J.M, Sonti R.V, Tsuge S, Brendel V, Rabinowicz P.D, Leach J.E, White F.F, Salzberg S.L (2011) Two new complete genome sequences offer insight into host and tissue specificity of plant pathogenic Xanthomonas spp. Journal of Bacteriology 193(19):5450-5464

    28. Buchmann J.P, Matsumoto T, Stein N, Keller B, Wicker T (2012) Inter-species sequence comparison of Brachypodium reveals how transposon activity corrodes genome colinearity The Plant Journal 71(4):550-563

    29. Chen G, Komatsuda T, Ma J.F, Li C, Yamaji N, Nevo E (2011) A functional cutin matrix is required for plant protection against water loss Plant Signaling & Behavior 6(9):1297-1299

    30. Chen G, Komatsuda T, Ma J.F, Nawrath C, Pourkheirandish M, Tagiri A, Hu Y-G, Sameri M, Li X, Zhao X, Liu Y, Li C, Ma X, Wang A, Nair S, Wang N, Miyao A, Sakuma S, Yamaji N, Zheng X, Nevo E (2011) An ATP-binding cassette subfamily G full transporter is essential for the retention of leaf water in both wild barley and rice Proceedings of the National Academy of Sciences of the United States of America 108(30):12354-12359

    31. Chen H, Wei T, Saotome A, Sakaguchi K, Shikamoto Y, Mizuno H, Akita F, Shimizu T, Uehara-Ichiki T, Omura T (2012) Aggregation ability of virus-specific antibodies is correlated with their capacity to neutralize Rice dwarf virus Japan Agricultural Research Quarterly 46(1):65-71

    32. Chiba M, Miura T, Kasai K, Monzen S, Kashiwakura I, Yasue H, T Nakamura T (2012) Identification of up-regulated and down-regulated cis-natural antisense transcripts in the human B lymphoblastic cell line IM-9 after X-ray irradiation Molecular Medicine Reports 5(5):1151-1157

    33. Daimon T, Fujii T, Yago M, Hsu Y-F, Nakajima Y, Fujii T, Katsuma S, Ishikawa Y, Shimada T (2012) Female sex pheromone and male behavioral responses of the bombycid moth Trilocha varians: comparison with those of the domesticated silkmoth Bombyx mori Naturwissenschaften 99(3):207-215

    34. Daimon T, Kozaki T, Niwa R, Kobayashi I, Furuta K, Namiki T, Uchino K, Banno Y, Katsuma S, Tamura T, Mita K, Sezutsu H, Nakayama M, Itoyama K, Shimada T, Shinoda T (2012) Precocious metamorphosis in the juvenile hormone-deficient mutant of the silkworm, Bombyx mori PLoS Genetics 8(3):e1002486

    35. De Vleesschauwer D, Van Buyten E, Satoh K, Balidion J, Mauleon R, Choi I-R, Vera-Cruz C, Kikuchi S, Höfte M (2012) Brassinosteroids antagonize gibberellin- and salicylate-mediated root immunity in rice Plant Physiology 158(4):1833-1846

    36. Djedidi S, Yokoyama T, Tomooka N, Ohkama-Ohtsu N, Risal C.P, Abdelly C, Sekimoto H (2011) Phenotypic and genetic characterization of rhizobia associated with alfalfa in the Hokkaido and Ishigaki regions of Japan Systematic and Applied Microbiology 34(6):453-461

    37. Ebitani T, Hayashi N, Omoteno M, Ozaki H, Yano M, Morikawa M, Fukuta Y (2011) Characterization of Pi13, a blast resistance gene that maps to chromosome 6 in indica rice (Oryza sativa L. variety, Kasalath) Breeding Science 61(3):251-259

    38. Emran A.M, Tabei Y, Kobayashi K, Yamaoka N, Nishiguchi M (2012) Molecular analysis of transgenic melon plants showing virus resistance conferred by direct repeat of movement gene of Cucumber green mottle mosaic virus Plant Cell Reports 31:1371-1377

    39. Endo M, Nakayama S, Umeda-Hara C, Ohtsuki N, Saika H, Umeda M, Toki S (2012) CDKB2 is involved in mitosis and DNA damage response in rice The Plant Journal 69(6):967-977

    40. Endo-Higashi N, Izawa T (2011) Flowering-time genes Heading date 1 and Early heading date 1 together control panicle development in rice Plant and Cell Physiology 52(6):1083-1094

    41. 相 爾 璇 , 蔡 媦 婷 , 謝 廷 芳 , 松 本 敏 一 , 新 野 孝 男 (2011) 乾 燥 處 理 及 超低溫保存對兩種原生種白花蝴蝶蘭種子活力之影響 台灣農業研究 60(4):309-317

    42. Fu Q, Matsumoto Y, Matsumura M, Hirai Y, Sato Y, Noda H (2012) Presence of a short repeat sequence in internal transcribed spacer (ITS) 1 of the rRNA gene of Sogatella furcifera (Hemiptera: Delphacidae) from geographically different populations in Asia Applied Entomology and Zoology 47(2):95-101

    43. Fuchimoto D, Senbon S, Suzuki S, Onishi A (2011) Effects of preservation of porcine oocytes by dibutyryl cyclic AMP on in vitro maturation, fertilization and development Japan Agricultural Research Quarterly 45(3):295-300

  • 農業生物資源研究所 平成 23 年度年報

    研究の実施状況

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    44. Fujii T, Abe H, Yamamoto K, Katsuma S, Shimada T (2011) Interspecies linkage analysis of mo, a Bombyx mori locus associated with mosaicism and gynandromorphism Genetica 139(10):1323-1329

    45. Fujimoto Z, Kimura K (2012) Crystal structure of bacteriophage ΦNIT1 zinc peptidase PghP that hydrolyzes γ-glutamyl linkage of bacterial poly-γ-glutamate Proteins: Structure, Function, and Bioinformatics 80(3):722-732

    46. Fujinaga M, Yamagishi N, Ogiso H, Takeuchi J, Moriwaki J, Sato T (2011) First report of celery stunt anthracnose caused by Colletotrichum simmondsii in Japan Journal of General Plant Pathology 77(4):243-247

    47. Fujiwara-Tsujii N, Yasui H, Wakamura S, Hashimoto I, Minamishima M (2012) The white-spotted longicorn beetle, Anoplophora malasiaca (Coleoptera: Cerambycidae), with a blueberry as host plant, utilizes host chemicals for male orientation Applied Entomology and Zoology 47(2):103-110

    48. Fujiwara-Tsujii N, Yasui H, Wakamura S, Tanaka S, Arakaki N (2011) Determination of the amount of sex pheromone emitted by individual virgin females of the white grub beetle, Dasylepida ishigakiensis (Coleoptera:Scarabaeidae) at different stages of reproductive life Applied Entomology and Zoology 46(4):527-532

    49. Fukai E, Soyano T, Umehara Y, Nakayama S, Hirakawa H, Tabata S, Sato S, Hayashi M (2012) Establishment of a Lotus japonicus gene tagging population using the exon-targeting endogenous retrotransposon LORE1 The Plant Journal 69(4):720-730

    50. 深見伶子 , 山本浩二 , 奥島里美 , 栗山昭 , 石川雅也 (2011) チシマザサ葉身及び葉鞘における凍結挙動の解析 低温生物工学会誌 57(1):71-76

    51. Fukuda M, Satoh-Cruz M, Wen L, Crofts A.J, Sugino A, Washida H, Okita T.W, Ogawa M, Kawagoe Y, Maeshima M, Kumamaru T (2011) The small GTPase Rab5a is essential for intracellular transport of proglutelin from the Golgi apparatus to the protein storage vacuole and endosomal membrane organization in developing rice endosperm Plant Physiology 157(2):632-644

    52. Fukumoto T, Kano A, Ohtani K, Yamasaki-Kokudo Y, Kim B-G, Hosotani K, Saito M, Shirakawa C, Tajima S, Izumori K, Ohara T, Shigematsu Y, Tanaka K, Ishida Y, Nishizawa Y, Tada Y, Ichimura K, Gomi K, Akimitsu K (2011) Rare sugar D-allose suppresses gibberellin signaling through hexokinase-dependent pathway in Oryza sativa L. Planta 234(6):1083-1095

    53. Fukuoka S, Mizobuchi R, Saka N, Ivan S, Matsumoto T, Okuno K, Yano M (2012) A multiple gene complex on rice chromosome 4 is involved in durable resistance to rice blast Theoretical and Applied Genetics 125(3):551-559

    54. Fukushima S, Yoshida M, Takatsuji H (2012) Role of linkers between zinc fingers in spacing recognition by plant TFIIIA-type zinc-finger proteins Journal of Amino Acids 2012:848037

    55. Furuki T, Shimizu T, Kikawada T, Okuda T, Sakurai M (2011) Salt effects on the structural and thermodynamic properties of a Group 3 LEA protein model peptide Biochemistry 50(33):7093-7103

    56. 古木隆生 , 清水天平 , Chakraborte S, 畑中理恵 , 高橋剛 , 黄川田隆洋 , 奥田隆 , 三原久和 , Tunnacliffe A, 櫻井実 (2011) グループ 3LEA タンパク質の 22-mer モデルペプチドが示すタンパク質凝集抑制効果 低温生物工学会誌 57(2):139-142

    57. Gotoh H, Hirawatari K, Hanzawa N, Miura I, Wakana S (2012) QTL on mouse chromosomes 1 and 4 causing sperm-head morphological abnormality and male subfertility Mammalian Genome 23(7-8):399-403

    58. Gotoh H, Cornette R, Koshikawa S, Okada Y, Lavine L.C, Emlen D.J, Miura T (2011) Juvenile hormone regulates extreme mandible growth in male stag beetles PLoS ONE 6(6):e21139

    59. Gu X-Y, Foley M.E, Horvath D.P, Anderson J.V, Feng J, Zhang L, Mowry C.R, Ye H, Suttle J.C, Kadowaki K, Chen Z (2011) Association between seed dormancy and pericarp color is controlled by a pleiotropic gene that regulates ABA and flavonoid synthesis in weedy red rice Genetics 189(4):1515-1524

    60. 萩原慎太郎 , 大田紗矢佳 , 岡本智伸 , 芝田猛 , 矢用健一 , 伊藤秀一 (2011) オガクズ床と牧草床環境がブロイラーおよび熊本種の行動に及ぼす影響 日本暖地畜産学会報 54(1):5-14

    61. Hakoyama T, Niimi K, Yamamoto T, Isobe S, Sato S, Nakamura Y, Tabata S, Kumagai H, Umehara Y, Brossuleit K, Petersen T.R, Sandal N, Stougaard J, Udvardi M.K, Tamaoki M, Kawaguchi M, Kouchi H, Suganuma N (2012) The integral membrane protein SEN1 is required for symbiotic nitrogen fixation in Lotus japonicus nodules Plant and Cell Physiology 53(1):225-236

    62. Hamada H, Kurusu T, Okuma E, Nokajima H, Kiyoduka M, Koyano T, Sugiyama Y, Okada K, Koga J, Saji H, Miyao A, Hirochika H, Yamane H, Murata Y, Kuchitsu K (2012) Regulation of a proteinaceous elicitor-induced Ca2+ influx and production of phytoalexins by a putative voltage-gated cation channel, OsTPC1, in cultured rice cells Journal of Biological Chemistry 287(13):9931-9939

    63. Hasegawa H, Noguchi J, Yamashita M, Okada R, Sugimoto R, Furuya M, Unoki T, Funakoshi Y, Baba T, Kanaho Y (2012) Phosphatidylinositol 4-phosphate 5-kinase is indispensable for mouse spermatogenesis Biology of Reproduction 86(5):136

    64. Hashimoto T, Kawazu T, Nagasaki T, Murakami A, Yamaoka T (2012) Quantitative comparison between poly(L-arginine) and poly(L-lysine) at each step of polyplex-based gene transfection using a microinjection technique Science and Technology of Advanced Materials 13(1):015009

    65. 畑中理恵 , 薦田 (萩原) 優香 , 金森保志 , 藤田弥佳 , コルネット ・ リシャー , 奥田隆 , 黄川田隆洋 (2011) ネムリユスリカ LEA タンパク質 (PvLEA4) の機能解析 低温生物工学会誌 57(2):135-138

    66. Hattori M, Nakamura M, Komatsu S, Tsuchihara K, Tamura Y, Hasegawa T (2012) Molecular cloning of a novel calcium-binding protein in the secreted saliva of the green rice leafhopper Nephotettix cincticeps Insect Biochemistry and Molecular Biology 42(1):1-9

  • 農業生物資源研究所 平成 23 年度年報

    研究の実施状況

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    67. Hattori S, Terada D, Teramoto H, Kameda T, Tamada Y, Kobayashi H, Honda T, Yoshikawa C (2012) Influence of sterilisations on silk protein-based materials Bioinspired, Biomimetic and Nanobiomaterials 1(3):195-199

    68. Hayashi K, Ushizawa K, Hosoe M, Takahashi T (2011) Differential gene expression of serine protease inhibitors in bovine ovarian follicle: possible involvement in follicular growth and atresia Reproductive Biology and Endocrinology 9:72

    69. Hayashi S, Wakasa Y, Takahashi H, Kawakatsu T, Takaiwa F (2012) Signal transduction by IRE1-mediated splicing of bZIP50 and other stress sensors in the endoplasmic reticulum stress response of rice The Plant Journal 69(6):946-956

    70. Higuchi-Takeuchi M, Ichikawa T, Kondou Y, Matsui K, Hasegawa Y, Kawashima M, Sonoike K, Mori M, Hirochika H, Matsui M (2011) Functional analysis of two isoforms of leaf-type ferredoxin-NADP+-oxidoreductase in rice using the heterologous expression system of Arabidopsis Plant Physiology 157(1):96-108

    71. 日本典秀 , 檜垣智美 , 前田太郎 , 長森茂之 , 富所康広 (2011) マイクロサテライト DNA マーカーを利用した天敵評価 植物防疫 65(5):274-279

    72. Hirano R, Naito K, Fukunaga K, Watanabe K.N, Ohsawa R, Kawase M (2011) Genetic structure of landraces in foxtail millet (Setaria italica (L.) P. Beauv.) revealed with transposon display and interpretation to crop evolution of foxtail millet Genome 54(6):498-506

    73. Hirokawa M, Tatematsu K (2011) The order of four homeotic-mutant genes, Nc, ECw, EKp and EMu, on the 6th-linkage group of Bombyx mori Journal of Insect Biotechnology and Sericology 80(2):41-48

    74. Hirota T, Sayama T, Yamasaki M, Sasama H, Sugimoto T, Ishimoto M, Yoshida S (2012) Diversity and population structure of black soybean landraces originating from Tanba and neighboring regions Breeding Science 61(5):593-601

    75. Hokama Y, Arakaki N, Nagayama A, Kobayashi A, Ando T, Tanizaki S, Yasui H, Akino T, Wakamura S (2011) Presence of allochronic populations of the white grub beetle Dasylepida ishigakiensis (Coleoptera: Scarabaeidae) on Ishigaki Island, Japan Applied Entomology and Zoology 46(4):471-476

    76. Honda K, Ômura H, Chachin M, Kawano S, Inoue T.A (2011) Synergistic or antagonistic modulation of oviposition response of two swallowtail butterflies, Papilio maackii and P. protenor, to Phellodendron amurense by its constitutive prenylated flavonoid, phellamurin Journal of Chemical Ecology 37(6):575-581

    77. Huang C-F, Yamaji N, Ono K, Ma J.F (2012) A leucine-rich repeat receptor-like kinase gene is involved in the specification of outer cell layers in rice roots The Plant Journal 69(4):565-576

    78. Ibrahim N, Handa H, Cosset A, Koulintchenko M, Konstantinov Y, Lightowlers R.N, Dietrich A, Weber-Lotfi F (2011) DNA delivery to mitochondria: Sequence specificity and energy enhancement Pharmaceutical Research 28(11):2871-2882

    79. Ichikawa A, Ono H, Echigo T, Mikata Y (2011) Crystal structures and chiral recognition of the diastereomeric salts prepared from 2-methoxy-2-(1-naphthyl)propanoic acid CrystEngComm 13(14):4536-4548

    80. Ichinose H, Diertavitian S, Fujimoto Z, Kuno A, Leggio L.L, Kaneko S (2012) Structure-based engineering of glucose specificity in a family 10 xylanase from Streptomyces olivaceoviridis E-86 Process Biochemistry 47(3):358-365

    81. Ikeda S, Okubo T, Takeda N, Banba M, Sasaki K, Imaizumi-Anraku H, Fujihara S, Ohwaki Y, Ohshima K, Fukuta Y, Eda S, Mitsui H, Hattori M, Sato T, Shinano T, Minamisawa K (2011) The genotype of the calcium/calmodulin-dependent protein kinase gene (CCaMK) determines bacterial community diversity in rice roots under paddy and upland field conditions Applied and Environmental Microbiology 77(13):4399-4405

    82. Ikeda-Kawakatsu K, Maekawa M, Izawa T, Itoh J, Nagato Y (2012) ABERRANT PANICLE ORGANIZATION 2/RFL, the rice ortholog of Arabidopsis LEAFY, suppresses the transition from inflorescence meristem to floral meristem through interaction with APO1 The Plant Journal 69(1):168-180

    83. Iki T, Yoshikawa M, Meshi T, Ishikawa M (2012) Cyclophilin 40 facilitates HSP90-mediated RISC assembly in plants The EMBO Journal 31(2):267-278

    84. Imai T, Ohashi Y, Mitsuhara I, Seo S, Toshima H, Hasegawa M (2012) Identification of a degradation intermediate of the momilactone a rice phytoalexin by the rice blast fungus Bioscience, Biotechnology and Biochemistry 76(2):414-416

    85. Ishikawa A, Ogawa K, Gotoh H, Walsh T.K, Tagu D, Brisson J.A, Rispe C, S Jaubert-Possamai S, Kanbe T, Tsubota T, Shiotsuki T, Miura T (2012) Juvenile hormone titre and related gene expression during the change of reproductive modes in the pea aphid Insect Molecular Biology 21(1):49-60

    86. Ishikawa R, Aoki M, Kurotani K, Yokoi S, Shinomura T, Takano M, Shimamoto K (2011) Phytochrome B regulates Heading date 1 (Hd1)-mediated expression of rice florigen Hd3a and critical day length in rice Molecular Genetics and Genomics 285(6):461-470

    87. Ishimaru Y, Kakei Y, Shimo H, Bashir K, Sato Y, Sato Y, Uozumi N, Nakanishi H, Nishizawa N.K (2011) A rice phenolic efflux transporter is essential for solubilizing precipitated apoplasmic iron in the plant stele Journal of Biological Chemistry 286(28):24649-24655

    88. Ishimaru Y, Takahashi R, Bashir K, Shimo H, Senoura T, Sugimoto K, Ono K, Yano M, Ishikawa S, Arao T, Nakanishi H, Nishizawa N.K (2012) Characterizing the role of rice NRAMP5 in manganese, iron and cadmium transport Scientific Reports 2:286

    89. Itoh H, Izawa T (2011) A study of phytohormone biosynthetic gene expression using a circadian clock-related mutant in rice Plant Signaling & Behavior 6(12):1932-1936

    90. Iwamoto M, Kiyota S, Hanada A, Yamaguchi S, Takano M (2011) The multiple contributions of phytochromes to the control of internode elongation in rice Plant Physiology 157(3):1187-1195

  • 農業生物資源研究所 平成 23 年度年報

    研究の実施状況

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    91. Iwanaga M, Hitotsuyama T, Katsuma S, Ishihara G, Daimon T, Shimada T, Imanishi S, Kawasaki H (2012) Infection study of Bombyx mori macula-like virus (BmMLV) using a BmMLV-negative cell line and an infectious cDNA clone Journal of Virological Methods 179(2):316-324

    92. Iwasaki K, Miwa Y, Ogawa H, Yazaki S, Iwamoto M, Furusawa T, Onishi A, Kuzuya T, Haneda M, Watarai Y, Uchida K, Kobayashi T (2012) Comparative study on signal transduction in endothelial cells after anti-A/B and human leukocyte antigen antibody reaction: Implication of accommodation Transplantation 93(4):390-397

    93. Izawa T, Mihara M, Suzuki Y, Gupta M, Itoh H, Nagano A.J, Motoyama R, Sawada Y, Yano M, Yokota Hirai M, Makino A, Nagamura Y (2011) Os-GIGANTEA confers robust diurnal rhythms on the global transcriptome of rice in the field The Plant Cell 23(5):1741-1755

    94. Javadi F, Tun Tun Y, Kawase M, Guan K, Yamaguchi H (2011) Molecular phylogeny of the subgenus Ceratotropis (genus Vigna, Leguminosae) reveals three eco-geographical groups and Late Pliocene–Pleistocene diversification: evidence from four plastid DNA region sequences Annals of Botany 108(2):367-380

    95. Kabir K.E, Koga D, Konno K, Takanashi T (2012) Fluorescein-5 isothiocyanate conjugated-chitin-binding domain probe (FITC-CBD)-coupled detection of chitin in the peritrophic membrane of Monochamus alternatus (Coleoptera: Cerambycidae) Journal of Asia-Pacific Entomology 15(3):397-400

    96. Kaedei Y, Naito M, Naoi H, Sato Y, Taniguchi M, Tanihara F, Kikuchi K, Nagai T, Otoi T (2012) Effects of ( − )-epigallocatechin gallate on the motility and penetrability of frozen–thawed boar spermatozoa incubated in the fertilization medium Reproduction in Domestic Animals 47(6):880-886

    97. Kaga A, Shimizu T, Watanabe S, Tsubokura Y, Katayose Y, Harada K, Vaughan D.A, Tomooka N (2012) Evaluation of soybean germplasm conserved in NIAS genebank and development of mini core collections Breeding Science 61(5):566-592

    98. Kaihara K, Kotaki T, Numata H, Ohfune Y, Shinada T (2012) Structure-activity relationship of novel juvenile hormone, JHSB3, isolated from the stink bug, Plautia stali Tetrahedron 68(1):106-113

    99. Kameda T, Hashimoto T, Tamada Y (2011) Effects of supercooling and organic solvent on the formation of a silk sponge with porous 3-D structure, and its dynamical and structural characterization using solid-state NMR Journal of Materials Science 46(24):7923-7930

    100. Kameda T, Kojima K, Zhang Q, Sezutsu H (2012) Identification of hornet silk gene with a characteristic repetitive sequence in Vespa simillima xanthoptera Comparative Biochemistry and Physiology Part B: Biochemistry and Molecular Biology 161(1):17-24

    101. Kamimura M, Saito H, Niwa R, Niimi T, Toyoda K, Ueno C, Kanamori Y, Shimura S, Kiuchi M (2012) Fungal ecdysteroid-22-oxidase: a new tool for manipulating ecdysteroid signaling and insect development Journal of Biological Chemistry 287(20):16488-16498

    102. Kaneko A, Tamada Y, Hirai S, Kuzuya T, Hashimoto T (2012) Characterization of a silk-resinified compact fabricated using a pulse-energizing sintering device Macromolecular Materials and Engineering 297(3):272-278

    103. Kano A, Hosotani K, Gomi K, Yamasaki-Kokudo Y, Shirakawa C, Fukumoto T, Ohtani K, Tajima S, Izumori K, Tanaka K, Ishida Y, Nishizawa Y, Ichimura K, Tada Y, Akimitsu K (2011) D-Psicose induces upregulation of defense-related genes and resistance in rice against bacterial blight Journal of Plant Physiology 168(15):1852-1857

    104. Kasajima I, Ebana K, Yamamoto T, Takahara K, Yano M, Kawai-Yamada M, Uchimiya H (2011) Molecular distinction in genetic regulation of nonphotochemical quenching in rice Proceedings of the National Academy of Sciences of the United States of America 108(33):13835-13840

    105. Kasuya E, Kushibiki S, Yayou K, Hodate K, Ogino M, Sutoh M (2012) The effect of lighting conditions on the rhythmicity of growth hormone secretion in Holstein steers Animal Science Journal 83(3):238-244

    106. Katayama M, Fukuda T, Okamuara T, Suda Y, Suzuki E, Uenishi H, Suzuki K (2011) Immunophenotype characterization for swine selected line, which is resistant for the Mycoplasma Pneumonia Asian-Australasian Journal of Animal Sciences 24(7):889-897

    107. Katayose Y, Kanamori H, Shimomura M, Ohyanagi H, Ikawa H, Minami H, Shibata M, Ito T, Kurita K, Ito K, Tsubokura Y, Kaga A, Wu J, Matsumoto T, Harada K, Sasaki T (2012) DaizuBase, an integrated soybean genome database including BAC-based physical maps Breeding Science 61(5):661-664

    108. Kato T, Segami S, Toriyama M, Kono I, Ando T, Yano M, Kitano H, Miura K, Iwasaki Y (2011) Detection of QTLs for grain length from large grain rice (Oryza sativa L.) Breeding Science 61(3):269-274

    109. Kawahigashi H, Kasuga S, Okuizumi H, Kanamori H, Ando T, Matsumoto T (2011) Classification of genotypes of the target leaf spot-resistant gene (ds1) in a sorghum collection Crop Science 51(5):2095-2103

    110. Kawakami M, Tomita N, Shimada Y, Yamamoto K, Tamada Y, Kachi N, Suguro T (2011) Chondrocyte distribution and cartilage regeneration in silk fibroin sponge Bio-medical Materials and Engineering 21(1):53-61

    111. Kawano A, Tsukimoto M, Mori D, Noguchi T, Harada H, Takenouchi T, Kitani H, Kojima S (2012) Regulation of P2X7-dependent inflammatory functions by P2X4 receptor in mouse macrophages Biochemical and Biophysical Research Communications 420(1):102-107

    112. Kawano A, Tsukimoto M, Noguchi T, Hotta N, Harada H, Takenouchi T, Kitani H, Kojima S (2012) Involvement of P2X4 receptor in P2X7 receptor-dependent cell death of mouse macrophages Biochemical and Biophysical Research Communications 419(2):374-380

  • 農業生物資源研究所 平成 23 年度年報

    研究の実施状況

    12

    113. Kawaoka S, Kadota K, Arai Y, Suzuki Y, Fujii T, Abe H, Yasukochi Y, Mita K, Sugano S, Shimizu K, Tomari Y, Shimada T, Katsuma S (2011) The silkworm W chromosome is a source of female-enriched piRNAs RNA 17(12):2144-2151

    114. Kawaura K, Wu J, Matsumoto T, Kanamori H, Katagiri S, Ogihara Y (2012) Genome change in wheat observed through the structure and expression of α/β-gliadin genes Functional & Integrative Genomics 12(2):341-355

    115. Kawazu K, Mochizuki A, Sato Y, Sugeno W, Murata M, Seo S, Mitsuhara I (2012) Different expression profiles of jasmonic acid and salicylic acid inducible genes in the tomato plant against herbivores with various feeding modes Arthropod-Plant Interactions 6(2):221-230

    116. Khodayari H, Saeidi H, Rahiminejad M.R, Komatsuda T (2011) Transferability and polymorphism of barley microsatelite markers across H-genome containing species in the genus Hordeum (H. vulgare and H. bulbosum) The Iranian Journal of Botany 17(2):200-211

    117. Kikuchi R, Kawahigashi H, Oshima M, Ando T, Handa H (2012) The differential expression of HvCO9, a member of the CONSTANS-like gene family, contributes to the control of flowering under short-day conditions in barley Journal of Experimental Botany 63(2):773-784

    118. Kim C, Kim J, Kikuchi S, Choi J, Kim Y, Park H, Seol Y, Park D, Hahn J, Kim Y (2011) Computational identification of Chinese cabbage anthocyaninspecific genes BioChip Journal 5(2):184-192

    119. Kim H, Terakami S, Nishitani C, Kurita K, Kanamori H, Katayose Y, Sawamura Y, Saito T, Yamamoto T (2012) Development of cultivar-specific DNA markers based on retrotransposon-based insertional polymorphism in Japanese pear Breeding Science 62(1):53-62

    120. Kim S-H, Oikawa T, Kyozuka J, Wong H.L, Umemura K, Kishi-Kaboshi M, Takahashi A, Kawano Y, Kawasaki T, Shimamoto K (2012) The bHLH rac immunity1 (RAI1) is activated by OsRac1 via OsMAPK3 and OsMAPK6 in rice immunity Plant and Cell Physiology 53(4):740-754

    121. Kim T-H, Hauser F, Ha T, Xue S, Böhmer M, Nishimura N, Munemasa S, Hubbard K, Peine N, Lee B-h, Lee S, Robert N, Parker J.E, Schroeder J.I (2011) Chemical genetics reveals negative regulation of abscisic acid signaling by a plant immune response pathway Current Biology 21(11):990-997

    122. Kim Y-M, Kiso Y, Muraki T, Kang M-S, Nakai H, Saburi W, Lang W, Kang H-K, Okuyama M, Mori H, Suzuki R, Funane K, Suzuki N, Momma M, Fujimoto Z, Oguma T, Kobayashi M, Kim D, Kimura A (2012) Novel dextranase catalyzing cycloisomaltooligosaccharide-formation and identification of catalytic amino acids and their functions using chemical rescue approach Journal of Biological Chemistry 287(24):19927-19935

    123. Kim Y-M, Shimizu R, Nakai H, Mori H, Okuyama M, Kang M-S, Fujimoto Z, Funane K, Kim D, Kimura A (2011) Truncation of N- and C-terminal regions of Streptococcus mutans dextranase enhances catalytic activity Applied Microbiology and Biotechnology 91(2):329-339

    124. Kim Y-S, Lim S, Yoda H, Choi Y-E, Sano H (2011) Simultaneous activation of salicylate production and fungal resistance in transgenic Chrysanthemum producing caffeine Plant Signaling & Behavior 6(3):409-412

    125. Kishimoto H, Maeda T, Wright L.C, James D.G (2011) Identification of prey consumed by Stethorus punctum picipes (Casey) (Cleoptera: Coccinellidae) in tree fruit and vines in Washington State, USA International Journal of Acarology 37(Suppl. 1):216-220

    126. 北夕紀 , 安藤麻子 , 田中景子 , 猪子英俊 , 椎名隆 , 細道一善 , 上西博英 (2011) 次世代シークエンサー Roche 454FLXを用いた MHC タイピング法と遺伝子発現解析法の開発 DNA多型 19:223-229

    127. Kita Y.F, Ando A, Tanaka K, Suzuki S, Ozaki Y, Uenishi H, Inoko H, Kulski J.K, Shiina T (2012) Application of high-resolution, massively parallel pyrosequencing for estimation of haplotypes and gene expression levels of swine leukocyte antigen (SLA) class I genes Immunogenetics 64(3):187-199

    128. Kitamoto K.H, Shinozaki Y, Cao X-h, Morita T, Konishi M, Tago K, Kajiwara H, Koitabashi M, Yoshida S, Watanabe T, Sameshima-Yamashita Y, Nakajima-Kambe T, Tsushima S (2011) Phyllosphere yeasts rapidly break down biodegradable plastics AMB Express 1:44

    129. Kitamoto N, Kaga A, Kuroda Y, Ohsawa R (2012) A model to predict the frequency of integration of fitness-related QTLs from cultivated to wild soybean Transgenic Research 21(1):131-138

    130. Kitani H, Takenouchi T, Sato M, Yoshioka M, Yamanaka N (2011) A simple and efficient method to isolate macrophages from mixed primary cultures of adult liver cells Journal of Visualized Experiments (51):2757

    131. Kiyota S, Xie X, Takano M (2012) Phytochromes A and C cooperatively regulate early and transient gene expression after red-light irradiation in rice seedlings Plant Physiology and Biochemistry 51:10-17

    132. Kobayashi H, Kawasaki K, Takeishi K, Noda H (2011) Symbiont of the stink bug Plautia stali synthesizes rough-type lipopolysaccharide Microbiological Research 167(1):48-54

    133. Kobayashi I, Tsukioka H, Kômoto N, Uchino K, Sezutsu H, Tamura T, Kusakabe T, Tomita S (2012) SID-1 protein of Caenorhabditis elegans mediates uptake of dsRNA into Bombyx cells Insect Biochemistry and Molecular Biology 42(2):148-154

    134. Kobayashi T, Matsuki N, Yokosuka T (2011) Genetic isolation of the sorghum plant bug Stenotus rubrovittatus (Hemiptera: Miridae) in Fukushima and Ibaraki prefectures Applied Entomology and Zoology 46(3):343-351

    135. Kobayashi T, Takada M, Takagi S, Yoshioka A, Washitani I (2011) Spider predation on a mirid pest in Japanese rice fields Basic and Applied Ecology 12(6):532-539

  • 農業生物資源研究所 平成 23 年度年報

    研究の実施状況

    13

    136. Kojima M, Ashino T, Yoshida T, Iwakura Y, Degawa M (2011) Interleukin-1 controls the constitutive expression of the Cyp7a1 gene by regulating the expression of Cyp7a1 transcriptional regulators in the mouse liver Biological & Pharmaceutical Bulletin 34(10):1644-1647

    137. Kojima M, Ashino T, Yoshida T, Iwakura Y, Degawa M (2012) Involvement of interleukin-1 in lead nitrate-induced hypercholesterolemia in mice Biological & Pharmaceutical Bulletin 35(2):246-250

    138. Kokuho T, Dang H.V, Yasue H (2012) Molecular cloning of the swine interleukin-23 subunit p19 and of its receptor components interleukin-23R α and -12Rβ1 Journal of Veterinary Medical Science 74(3):367-372

    139. Komatsu K, Hwang T-Y, Takahashi M, Sayama T, Funatsuki H, Oki N, Ishimoto M (2012) Identification of QTL controlling post-flowering period in soybean Breeding Science 61(5):646-652

    140. Komatsu M, Kojima M, Okamura H, Nishio M, Kaneda M, Kojima T, Takeda H, Malau-Aduli A.E.O, Takahashi H (2012) Age-related changes in gene expression of the growth hormone secretagogue and growth hormone-releasing hormone receptors in Holstein-Friesian cattle Domestic Animal Endocrinology 42(2):83-93

    141. Komatsu S, Deschamps T, Hiraga S, Kato M, Chiba M, Hashiguchi A, Tougou M, Shimamura S, Yasue H (2011) Characterization of a novel flooding stress-responsive alcohol dehydrogenase expressed in soybean roots Plant Molecular Biology 77(3):309-322

    142. Kômoto N, Yukuhiro K, Tomita S (2012) Novel gene rearrangements in the mitochondrial genome of a webspinner, Aposthonia japonica (Insecta: Embioptera) Genome 55(3):222-233

    143. Kondo N, Tomooka N (2012) New sources of resistance to Cadophora gregata f. sp. adzukicola and Fusarium oxysporum f. sp. adzukicola in Vigna spp. Plant Disease 96(4):562-568

    144. Kongjaimun A, Kaga A, Tomooka N, Somta P, Shimizu T, Shu Y, Isemura T, Vaughan D.A, Srinives P (2012) An SSR-based linkage map of yardlong bean (Vigna unguiculata (L.) Walp. subsp. unguiculata Sesquipedalis Group) and QTL analysis of pod length Genome 55(2):81-92

    145. Kongjaimun A, Kaga A, Tomooka N, Somta P, Vaughan D.A, Srinives P (2012) The genetics of domestication of yardlong bean, Vigna unguiculata (L.) Walp. ssp. unguiculata cv.-gr. sesquipedalis Annals of Botany 109(6):1185-1200

    146. Konishi T, Aohara T, Igasaki T, Hayashi N, Miyazaki Y, Takahashi A, Hirochika H, Iwai H, Satoh S, Ishii T (2011) Down-regulation of UDP-arabinopyranose mutase reduces the proportion of arabinofuranose present in rice cell walls Phytochemistry 72(16):1962-1968

    147. Koshi K, Ushizawa K, Kizaki K, Takahashi T, Hashizume K (2011) Expression of endogenous retrovirus-like transcripts in bovine trophoblastic cells Placenta 32(7):493-499

    148. Kotani N, Maeda K, Watanabe T, Hiramatsu M, Gong L-k, Bi Y-a, Takezawa T, Kusuhara H, Sugiyama Y (2011) Culture-period-dependent changes in the uptake of transporter substrates in sandwich-cultured rat and human hepatocytes Drug Metabolism and Disposition 39(9):1503-1510

    149. Kouzai Y, Mochizuki S, Saito A, Ando A, Minami E, Nishizawa Y (2012) Expression of a bacterial chitosanase in rice plants improves disease resistance to the rice blast fungus Magnaporthe oryzae Plant Cell Reports 31(4):629-636

    150. Kurusu T, Yamanaka T, Nakano M, Takiguchi A, Ogasawara Y, Hayashi T, Iida K, Hanamata S, Shinozaki K, Iida H, Kuchitsu K (2012) Involvement of the putative Ca2+-permeable mechanosensitive channels, NtMCA1 and NtMCA2, in Ca2+ uptake, Ca2+-dependent cell proliferation and mechanical stress-induced gene expression in tobacco (Nicotiana tabacum) BY-2 cells Journal of Plant Research 125(4):555-568

    151. Kusano M, Fukushima A, Fujita N, Okazaki Y, Kobayashi M, Fujita Oitome N, Ebana K, Saito K (2012) Deciphering starch quality of rice kernels using metabolite profiling and pedigree network analysis Molecular Plant 5(2):442-451

    152. Kushiro M, Saitoh H, Sugiura Y, Aoki T, Kawamoto S, Sato T (2012) Experimental infection of Fusarium proliferatum in Oryza sativa plants; fumonisin B1 production and survival rate in grains International Journal of Food Microbiology 156(3):204-208

    153. Kusumi K, Sakata C, Nakamura T, Kawasaki S, Yoshimura A, Iba K (2011) A plastid protein NUS1 is essential for build-up of the genetic system for early chloroplast development under cold stress conditions The Plant Journal 68(6):1039-1050

    154. 楠岡真理子 , 七夕高也 , 古谷雅理 , 斎藤隆文 (2011) 時空間投影画像を用いた植物生長量の抽出 画像電子学会誌 40(5):808-814

    155. 桑名芳彦 , 小島桂 , 玉田靖 (2012) 外来タンパク質融合組換え繭糸の引張り物性-緑色蛍光タンパク質とオニグモ牽引糸タンパク質の影響- 日本シルク学会誌 20:81-83

    156. Kyoda K, Baba K, Kitano H, Onami S (2011) A proof of the DBRF-MEGN method, an algorithm for deducing minimum equivalent gene networks Source Code for Biology and Medicine 6:12

    157. Lacey M.J, Sémon E, Krasulová J, Sillam-Dussès D, Robert A, Cornette R, Hoskovec M, Žáček P, Valterová I, Bordereau C (2011) Chemical communication in termites: syn-4,6-Dimethylundecan-1-ol as trail-following pheromone, syn-4,6-dimethylundecanal and (5E)-2,6,10-trimethylundeca-5,9-dienal as the respective male and female sex pheromones in Hodotermopsis sjoestedti (Isoptera, Archotermopsidae) Journal of Insect Physiology 57(12):1585-1591

    158. Leroy P, Guilhot N, Sakai H, Bernard A, Choulet F, Theil S, Reboux S, Amano N, Flutre T, Pelegrin C, Ohyanagi H, Seidel M, Giacomoni F, Reichstadt M, Alaux M, Gicquello E, Legeai F, Cerutti L, Numa H, Tanaka T, Mayer K, Itoh T, Quesneville H, Feuillet C (2012) TriAnnot:a versatile and high performance pipeline for the automated annotation of plant genomes Frontiers in Plant Science 3:5

  • 農業生物資源研究所 平成 23 年度年報

    研究の実施状況

    14

    159. Maeda T (2011) Foraging experiences affect the importance of chemical cues in patch-leaving decision of Neoseiulus womersleyi Schicha (Acari, Phytoseiidae) Journal of the Acarological Society of Japan 20(1):9-18

    160. Maeno K, Tanaka S (2012) Adult female desert locusts require contact chemicals and light for progeny gregarization Physiological Entomology 37(2):109-118

    161. Maeno K, Tanaka S (2011) Phase-specific responses to different qualities of food in the desert locust, Schistocerca gregaria: Developmental, morphological and reproductive characteristics Journal of Insect Physiology 57(4):514-520

    162. Marui J, Yamane N, Ohashi-Kunihiro S, Ando T, Terabayashi Y, Sano M, Ohashi S, Ohshima E, Tachibana K, Higa Y, Nishimura M, Koike H, Machida M (2011) Kojic acid biosynthesis in Aspergillus oryzae is regulated by a Zn(II)2Cys6 transcriptional activator and induced by kojic acid at the transcriptional level Journal of Bioscience and Bioengineering 112(1):40-43

    163. Marzougui S, Sugimoto K, Yamanouchi U, Shimono M, Hoshino T, Hori K, Kobayashi M, Ishiyama K, Yano M (2012) Mapping and characterization of seed dormancy QTLs using chromosome segment substitution lines in rice Theoretical and Applied Genetics 124(5):893-902

    164. Mase K, Hirayama C, Okada E, lizuka T, Kadono-Okuda K, Narukawa J, Yamamoto K (2011) Reinstatement of the 27th linkage group in the classical linkage map of Bombyx mori by molecular linkage analysis of faint-green cocoon gene Journal of Insect Biotechnology and Sericology 80(2):71-77

    165. Matsubara K, Ebana K, Mizubayashi T, Itoh S, Ando T, Nonoue Y, Ono N, Shibaya T, Ogiso E, Hori K, Fukuoka S, Yano M (2011) Relationship between transmission ratio distortion and genetic divergence in intraspecific rice crosses Molecular Genetics and Genomics 286(5-6):307-319

    166. Matsubara K, Ogiso-Tanaka E, Hori K, Ebana K, Ando T, Yano M (2012) Natural variation in Hd17, a homolog of Arabidopsis ELF3 that is involved in rice photoperiodic flowering Plant and Cell Physiology 53(4):709-716

    167. Matsuda F, Okazaki Y, Oikawa A, Kusano M, Nakabayashi R, Kikuchi J, Yonemaru J, Ebana K, Yano M, Saito K (2012) Dissection of genotype-phenotype associations in rice grains using metabolome quantitative trait loci analysis The Plant Journal 70(4):624-636

    168. Matsumoto T, Nakajima I, Eguchi-Ogawa T, Nagamura Y, Hamasima N, Uenishi H (2012) Changes in gene expression in a porcine preadipocyte cell line during differentiation Animal Genetics 43(5):535-544

    169. Matsumoto T, Okumura N, Uenishi H, Hayashi T, Hamasima N, Awata T (2012) Population structure of pigs determined by single nucleotide polymorphisms observed in assembled expressed sequence tags Animal Science Journal 83(1):14-22

    170. Matsumoto T, Okumura N, Uenishi H, Hayashi T, Hamasima N, Awata T (2012) Porcine single nucleotide polymorphism (SNP) development and population structure of pigs assessed by validated SNPs Biochemical Genetics 50(5-6):428-439

    171. Matsumoto Y, Matsumura M, Hoshizaki S, Sato Y, Noda H (2011) The strepsipteran parasite Elenchus japonicus (Strepsiptera, Elenchidae) of planthoppers consists of three genotypes Applied Entomology and Zoology 46(3):435-442

    172. Matsuura T, Mizuno A, Tsukamoto T, Shimizu Y, Saito N, Sato S, Kikuchi S, Uzuki T, Azegami K, Sawada H (2012) Erwinia uzenensis sp. nov., a novel pathogen that affects European pear trees (Pyrus communis L.) International Journal of Systematic and Evolutionary Microbiology 62:1799-1803

    173. Matsuura Y, Takehira M, Sawano M, Ogasahara K, Tanaka T, Yamamoto H, Kunishima N, Katoh E, Yutani K (2012) Role of charged residues in stabilization of Pyrococcus horikoshii CutA1, which has a denaturation temperature of nearly 150 °C FEBS Journal 279(1):78-90

    174. Matsuyama S, Ohkura S, Mogi K, Wakabayashi Y, Mori Y, Tsukamura H, Maeda K, Ichikawa M, Okamura H (2011) Morphological evidence for direct interaction between kisspeptin and gonadotropin-releasing hormone neurons at the median eminence of the male goat: An immunoelectron microscopic study Neuroendocrinology 94(4):323-332

    175. Mayer K.F.X, Martis M, Hedley P.E, Šimková H, Liu H, Morris J.A, Steuernagel B, Taudien S, Roessner S, Gundlach H, Kubaláková M, Suchánková P, Murat F, Felder M, Nussbaumer T, Graner A, Salse J, Endo T, Sakai H, Tanaka T, Itoh T, Sato K, Platzer M, Matsumoto T, Scholz U, Doležel J, Waugh R, Stein N (2011) Unlocking the barley genome by chromosomal and comparative genomics The Plant Cell 23(4):1249-1263

    176. Mentlak T.A, Kombrink A, Shinya T, Ryder L.S, Otomo I, Saitoh H, Terauchi R, Nishizawa Y, Shibuya N, Thomma B.P.H.J, Talbota N.J (2012) Effector-mediated suppression of chitin-triggered immunity by Magnaporthe oryzae is necessary for rice blast disease The Plant Cell 24(1):322-335

    177. Michikawa M, Ichinose H, Momma M, Biely P, Jongkees S, Yoshida M, Kotake T, Tsumuraya Y, Withers S, Fujimoto Z, Kaneko S (2012) Structural and biochemical characterization of glycoside hydrolase family 79 β-glucuronidase from Acidobacterium capsulatum Journal of Biological Chemistry 287(17):14069-14077

    178. Mishra B, Kizaki K, Koshi K, Ushizawa K, Takahashi T, Hosoe M, Sato T, Ito A, Hashizume K (2012) Expression of extracellular matrix metalloproteinase inducer (EMMPRIN) and its expected roles in the bovine endometrium during gestation Domestic Animal Endocrinology 42(2):63-73

    179. Mita T, Matsumoto Y (2012) First description of the male of Gonatopus javanus (R.C.L. Perkins) determined by mitochondrial COI sequence (Hymenoptera: Dryinidae) Entomological Science 15(2):214-218

    180. Mitsuhashi W, Ikeda H, Muraji M (2011) Fifty-year trend towards suppression of Wolbachia-induced male-killing by its butterfly host, Hypolimnas bolina Journal of Insect Science 11:92

    181. Miura K, Ohta M, Nakazawa M, Ono M, Hasegawa P.M (2011) ICE1 Ser403 is necessary for protein stabilization and regulation of cold signaling and tolerance The Plant Journal 67(2):269-279

  • 農業生物資源研究所 平成 23 年度年報

    研究の実施状況

    15

    182. Miura K, Sato A, Ohta M, Furukawa J (2011) Increased tolerance to salt stress in the phosphate-accumulating Arabidopsis mutants siz1 and pho2 Planta 234(6):1191-1199

    183. Miyamoto K, Shimizu T, Mochizuki S, Nishizawa Y, Minami E, Nojiri H, Yamane H, Okada K (2012) Stress-induced expression of the transcription factor RERJ1 is tightly regulated in response to jasmonic acid accumulation in rice Protoplasma 29 March

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    206. Naito M, Harumi T, Kuwana T (2012) Expression of GFP gene in cultured PGCs isolated from embryonic blood and incorporation into gonads of recipient embryos The Journal of Poultry Science 49(2):116-123

    207. Nakagawa H, Tanaka A, Tanabata T, Ohtake M, Fujioka S, Nakamura H, Ichikawa H, Mori M (2012) SHORT GRAIN 1 decreases organ elongation and brassinosteroid response in rice Plant Physiology 158(3):1208-1219

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    210. Nakai M, Ito J, Sato K, Noguchi J, Kaneko H, Kashiwazaki N, Kikuchi K (2011) Pre-treatment of sperm reduces success of ICSI in the pig Reproduction 142(2):285-293

    211. Nakajima K, Kinoshita H, Miura M (2011) Effects of raw silk size and twist number on characteristics of twisted silk yarn Journal of Insect Biotechnology and Sericology 80(1):9-13

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    216. Narita S, Kageyama D, Hiroki M, Sanpei T, Hashimoto S, Kamitoh T, Kato Y (2011) Wolbachia-induced feminisation newly found in Eurema hecabe, a sibling species of Eurema mandarina (Lepidoptera: Pieridae) Ecological Entomology 36(3):309-317

    217. Nemoto K, Ito S, Yoshida C, Miyata M, Kojima M, Degawa M (2011) Hepatic expression of spermatogenic genes and their transiently remarkable downregulations in Wistar-Kyoto rats in response to lead-nitrate administration: strain-difference in the gene expression patterns The Journal of Toxicological Sciences 36(3):357-364

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    219. Ngernyuang N, Kobayashi I, Promboon A, Ratanapo S, Tamura T, Ngernsiri L (2011) Cloning and expression analysis of the Bombyx mori α-amylase gene (Amy) from the indigenous Thai silkworm strain, Nanglai Journal of Insect Science 11:38

    220. Nishikiori M, Mori M, Dohi K, Okamura H, Katoh E, Naito S, Meshi T, Ishikawa M (2011) A host small GTP-binding protein ARL8 plays crucial roles in tobamovirus RNA replication PLoS Pathogens 7(12):e1002409

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    225. Ogawa D, Abe K, Miyao A, Kojima M, Sakakibara H, Mizutani M, Morita H, Toda Y, Hobo T, Sato Y, Hattori T, Hirochika H, Takeda S (2011) RSS1 regulates the cell cycle and maintains meristematic activity under stress conditions in rice Nature Communications 2:278

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    227. Ohnishi S, Miyake N, Takeuchi T, Kousaka F, Hiura S, Kanehira O, Saito M, Sayama T, Higashi A, Ishimoto M, Tanaka Y, Fujita S (2012) Fine mapping of foxglove aphid (Aulacorthum solani) resistance gene Raso1 in soybean and its effect on tolerance to Soybean dwarf virus transmitted by foxglove aphid Breeding Science 61(5):618-624

    228. 大城篤 , 比屋根真一 , 澤岻哲也 , 高江洲賢文 , 佐藤豊三 (2011) Macrophomina phaseolina (Tassi) Goidánich によるヤブガラシ類の炭腐病 (新称) の発生 日本植物病理学会報 77(3):143-147

    229. Oka K, Mochizuki T, Ohki S.T (2012) Detection of carrot red leaf virus-RNA in carrot seeds by multiplex RT-nested PCR Journal of General Plant Pathology 78(1):2-7

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    230. Okada K, Kimura M, Moriyama Y, Nakai M, Kikuchi K, Kaneko H, Kunieda T, Baba T, Noguchi J (2011) Expression analysis of MIF4GD in the rat testis Journal of Reproduction and Development 57(2):256-261

    231. Okamoto S, Nakagawa T, Kawaguchi M (2011) Expression and functional analysis of CLV3-like gene in the model legume Lotus japonicus Plant and Cell Physiology 52(7):1211-1221

    232. Okamura H, Nishikiori M, Xiang H, Ishikawa M, Katoh E (2011) Interconversion of two GDP-bound conformations and their selection in an Arf-family small G protein Structure 19(7):988-998

    233. 大川雅央 , 新野孝男 , 白田和人 , 長峰司 (2012) 農民の権利に係る国際状況とわが国の現状に対する提言 育種学研究 14(1):1-8

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    235. Oono Y, Kawahara Y, Kanamori H, Mizuno H, Yamagata H, Yamamoto M, Hosokawa S, Ikawa H, Akahane I, Zhu Z, Wu J, Itoh T, Matsumoto T (2011) mRNA-seq reveals a comprehensive transcriptome profile of rice under phosphate stress Rice 4(2):50-65

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    238. Otani Y, Yamaguchi Y, Sato Y, Furuichi T, Ikenaka K, Kitani H, Baba H (2011) PLD4 is involved in phagocytosis of microglia: Expression and localization changes of PLD4 are correlated with activation state of microglia PLoS ONE 6(11):e27544

    239. Ozawa K, Wakasa Y, Ogo Y, Matsuo K, Kawahigashi H, Takaiwa F (2012) Development of an efficient Agrobacterium-mediated gene targeting system for rice and analysis of rice knockouts lacking granule-bound starch synthase (Waxy) and β1,2-xylosyltransferase Plant and Cell Physiology 53(4):755-761

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    241. Park Y-J, Nemoto K, Nishikawa T, Matsushima K, Minami M, Kawase M (2011) Genetic diversity and expression analysis of granule bound starch synthase I gene in the new world grain amaranth (Amaranthus cruentus L.) Journal of Cereal Science 53(3):298-305

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    244. Rice WRKY Working Group (2012) Nomenclature report on rice WRKY’s -Conflict regarding gene names and its solution Rice 5:3

    245. Rowshan J, Kumagae M, Nishibori M, Yasue H, Wada Y (2011) Japanese silkie fowls are widely distributed in the phylogenetic tree derived from mitochondrial complete D-loop nucleotide sequences The Journal of Poultry Science 48(3):176-180

    246. Sabree Z.L, Huang C.Y, Arakawa G, Tokuda G, Lo N, Watanabe H, Moran N.A (2012) Genome shrinkage and loss of nutrient-providing potential in the obligate symbiont of the primitive termite Mastotermes darwiniensis Applied and Environmental Microbiology 78(1):204-210

    247. Saika H, Oikawa A, Matsuda F, Onodera H, Saito K, Toki S (2011) Application of gene targeting to designed mutation breeding of high-tryptophan rice Plant Physiology 156(3):1269-1277

    248. Saisho D, Ishii M, Hori K, Sato K (2011) Natural variation of barley vernalization requirements: Implication of quantitative variation of winter growth habit as an adaptive trait in East Asia Plant and Cell Physiology 52(5):738-749

    249. Saito H, Ogiso-Tanaka E, Okumoto Y, Yoshitake Y, Izumi H, Yokoo T, Matsubara K, Hori K, Yano M, Inoue H, Tanisaka T (2012) Ef7 encodes an ELF3-like protein and promotes rice flowering by negatively regulating the floral repressor gene Ghd7 under both short- and long-day conditions Plant and Cell Physiology 53(4):717-728

    250. Saito R, Kohno K, Okada Y, Osada Y, Numata K, Kohama C, Watanabe K, Nakaoka H, Yamamoto N, Kanai A, Yasue H, Murata S, Abe K, Tomita M, Ohkohchi N, Kiyosawa H (2011) Comprehensive expressional analyses of antisense transcripts in colon cancer tissues using artificial antisense probes BMC Medical Genomics 4:42

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    252. Sakai T, Mochizuki S, Haga K, Uehara Y, Suzuki A, Harada A, Wada T, Ishiguro S, Okada K (2012) The WAVY GROWTH 3 E3 ligase family controls the gravitropic response in Arabidopsis roots The Plant Journal 70(2):303-314

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    254. Sakumoto R, Vermehren M, Kenngott R.A, Okuda K, Sinowatz F (2011) Localization of gene and protein expressions of tumor necrosis factor-α and tumor necrosis factor receptor types I and II in the bovine corpus luteum during the estrous cycle Journal of Animal Science 89(10):3040-3047

    255. Sakurai T, Mitsuno H, Haupt S.S, Uchino K, Yokohari F, Nishioka T, Kobayashi I, Sezutsu H, Tamura T, Kanzaki R (2011) A single sex pheromone receptor determines chemical response specificity of sexual behavior in the silkmoth Bombyx mori PLoS Genetics 7(6):e1002115

    256. Sameri M, Pourkheirandish M, Chen G, Tonooka T, Komatsuda T (2011) Detection of photoperiod responsive and non-responsive flowering time QTL in barley Breeding Science 61(2):183-188

    257. Sano N, Permana H, Kumada R, Shinozaki Y, Tanabata T, Yamada T, Hirasawa T, Kanekatsu M (2012) Proteomic analysis of embryonic proteins synthesized from long-lived mRNAs during germination of rice seeds Plant and Cell Physiology 53(4):687-698

    258. Saruta M, Takada Y, Kikuchi A , Yamada T, Komatsu K, Sayama T, Ishimoto M, Okabe A (2012) Screening and genetic analysis of resistance to peanut stunt virus in soybean: identification of the putative Rpsv1 resistance gene Breeding Science 61(5):625-630

    259. Sarver B.A.J, Ward T.J, Gale L.R, Broz K, Corby Kistler H, Aoki T, Nicholson P, Carter J, O’Donnell K (2011) Novel fusarium head blight pathogens from Nepal and Louisiana revealed by multilocus genealogical concordance Fungal Genetics and Biology 48(12):1096-1107

    260. 笹川由紀 , 石川達夫 , 田部井豊 (2011) 遺伝子組換え農作物の理解増進のための情報提供に及ぼす体験型双方向コミュニケーションの効果 育種学研究 13(4):99-106

    261. Sato M, Ohtsuka M, Miura H, Miyoshi K, Watanabe S (2012) Determination of the optimal concentration of several selective drugs useful for generating multi-transgenic porcine embryonic fibroblasts Reproduction in Domestic Animals 47(5):759-765

    262. Sato M, Akasaka E, Saitoh I, Ohtsuka M, Watanabe S (2012) Development of a technique for efficient gene transfer to antral follicular cells in the mouse ovary Systems Biology in Reproductive Medicine 58(3):136-141

    263. Sato M, Sawahata R, Takenouchi T, Kitani H (2011) Identification of Fyn as the binding partner for the WASP N-terminal domain in T cells International Immunology 23(8):493-502

    264. Sato S, Hayashi T, Kobayashi E (2011) Characterization of porcine autism susceptibility candidate 2 as a candidate gene for the number of corpora lutea in pigs Animal Reproduction Science 126(3-4):211-220

    265. Sato S, Hayashi T, Kobayashi E (2011) Fine mapping the number of corpora lutea quantitative trait loci on SSC3: Analysis of the porcine follicle-stimulating hormone receptor gene Animal Science Journal 82(5):633-641

    266. 澤田宏之 , 綿打享子 , 功刀幸博 (2011) ブドウ斑点細菌病菌 (Xanthomonas arboricola) と核果類せん孔細菌病菌 (X. arboricola pv. pruni) の多相的な比較 日本植物病理学会報 77(4):265-277

    267. Saze H, Tsugane K, Kanno T, Nishimura T (2012) DNA Methylation in plants: Relationship to small RNAs and histone modifications, and functions in transposon inactivation Plant and Cell Physiology 53(5):766-784

    268. Scandiani M.M, Ruberti D.S, Giorda L.M, Pioli R.N, Luque A.G, Bottai H, Ivancovich J.J, Aoki T, O’Donnell K (2011) Comparison of inoculation methods for characterizing relative aggressiveness of two soybean sudden-death syndrome pathogens, Fusarium virguliforme and F. tucumaniae Tropical Plant Pathology 36(3):133-140

    269. Segami S, Kono I, Ando T, Yano M, Kitano H, Miura K, Iwasaki Y (2012) Small and round seed 5 gene encodes alpha-tubulin regulating seed cell elongation in rice Rice 5:4

    270. Sekiyama K, Fujita M, Sekigawa A, Takamatsu Y, Waragai M, Takenouchi T, Sugama S, Hashimoto M (2012) Ibuprofen ameliorates protein aggregation and astrocytic gliosis, but not cognitive dysfunction, in a transgenic mouse expressing dementia with Lewy bodies-linked P123H β-synuclein Neuroscience Letters 515(1):97-101

    271. Sekiyama K, Nakai M, Fujita M, Takenouchi T, Waragai M, Wei J, Sekigawa A, Takamatsu Y, Sugama S, Kitani H, Hashimoto M (2012) Theaflavins stimulate autophagic degradation of α-synuclein in neuronal cells Open Journal of Neuroscience 2:1

    272. Sekizawa K, Yamamoto S, Rafique T, Fukui K, Niino T (2011) Cryopreservation of in vitro-grown shoot tips of carnation (Dianthus caryophyllus L.) by vitrification method using aluminium cryo-plates Plant Biotechnology 28(4):401-405

    273. Sembon S, Fuchimoto D, Iwamoto M, Suzuki S, Yoshioka K, Onishi A (2011) A simple method for producing tetraploid porcine parthenogenetic embryos Theriogenology 76(4):598-606

    274. Sembon S, Iwamoto M, Hashimoto M, Oishi T, Fuchimoto D, Suzuki S, Yazaki S, Onishi A (2012) Porcine androgenetic embryos develop to fetal stage in recipient mothers Theriogenology 78(1):225-231

    275. Seo E-K, Nakamura H, Mori M, Asami T (2012) Screening and characterization of a chemical regulatorfor plant disease resistance Bioorganic & Medicinal Chemistry Letters 22(4):1761-1765

    276. Seo M-S, Takahashi S, Kadowaki K, Kawamukai M, Takahara M, Takamizo T (2011) Expression of CoQ10-producing ddsA transgene by efficient Agrobacterium-mediated transformation in Panicum meyerianum Plant Cell, Tissue and Organ Culture 107(2):325-332

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  • 農業生物資源研究所 平成 23 年度年報

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    278. Sharoni A.M, Nuruzzaman M, Satoh K, Moumeni A, Attia K, Venuprasad R, Serraj R, Kumar A, Leung H, Rafiul Islam A.K.M, Kikuchi S (2012) Comparative transcriptome analysis of AP2/EREBP gene family under normal and hormone treatments, and under two drought stresses in NILs setup by Aday Selection and IR64 Molecular Genetics and Genomics 287(1):1-19

    279. Shibata M, Okumura N, Ide-Okumura H, Horiuchi A, Matsumoto T, Awata T (2011) A method to identify the pork from the Jinhua pig breed maintained at the Research Center of Shizuoka prefecture The Journal of Animal Genetics 39(1):3-6

    280. Shibaya T, Nonoue Y, Ono N, Yamanouchi U, Hori K, Yano M (2011) Genetic interactions involved in the inhibition of heading by heading date QTL, Hd2 in rice under long-day conditions Theoretical and Applied Genetics 123(7):1133-1143

    281. Shimoda Y, Han L, Yamazaki T, Suzuki R, Hayashi M, Imaizumi-Anraku H (2012) Rhizobial and fungal symbioses show different requirements for calmodulin binding to calcium calmodulin–dependent protein kinase in Lotus japonicus The Plant Cell 24(1):304-321

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    283. 下元祥史 , 森田泰彰 , 竹内繁治 , 曳地康史 , 木場章範 , 佐藤豊三 (2011) ナス黒枯病菌の再同定 日本植物病理学会報 77(2):105-108

    284. Shimono M, Koga H, Akagi A, Hayashi N, Goto S, Sawada M, Kurihara T, Matsushita A, Sugano S, Jiang C-J, Kaku H, Inoue H, Takatsuji H (2012) Rice WRKY45 plays important roles in fungal and bacterial disease resistance Molecular Plant Pathology 13(1):83-94

    285. Shinkai H, Okumura N, Suzuki R, Muneta Y, Uenishi H (2012) Toll-like receptor 4 polymorphism impairing lipopolysaccharide signaling in Sus scrofa, and its restricted distribution among Japanese wild boar populations DNA and Cell Biology 31(4):575-581

    286. Shinya S, Ohnuma T, Kawamura S, Torikata T, Nishimura S, Katoh E, Fukamizo T (2011) Interaction of a goose-type lysozyme with chitin oligosaccharides as determined by NMR spectroscopy Journal of Biochemistry 150(5):569-577

    287. Shiro S, Yamamoto A, Umehara Y, Hayashi M, Yoshida N, Nishiwaki A, Yamakawa T, Saeki Y (2012) Effect of Rj-genotype and cultivation temperature on the community structure of soybean-nodulating bradyrhizobia Applied and Environmental Microbiology 78(4):1243-1250

    288. Somfai T, Kaneda M, Akagi S, Watanabe S, Haraguchi S, Mizutani E, Dang-Nguyen T.Q, Geshi M, Kikuchi K, Nagai T (2011) Enhancement of lipid metabolism with L-carnitine during in vitro maturation improves nuclear maturation and cleavage ability of follicular porcine oocytes Reproduction, Fertility and Development 23(7):912-920

    289. Somfai T, Kikuchi K, Kaneda M, Akagi S, Watanabe S, Mizutani E, Haraguchi S, Dang-Nguyen T.Q, Inaba Y, Geshi M, Nagai T (2011) Cytoskeletal abnormalities in relation with meiotic competence and ageing in porcine and bovine oocytes during in vitro maturation Anatomia, Histologia, Embryologia 40(5):335-344

    290. Sugama S, Takenouchi T, Sekiyama K, Kitani H, Hashimoto M (2011) Immunological responses of astroglia in the rat brain under acute stress: interleukin 1 beta co-localized in astroglia Neuroscience 192:429-437

    291. Sugimoto M, Ishii M, Mori I.C, Elena S, Gusev O.A, Kihara M, Hoki T, Sychev V.N, Levinskikh M.A, Novikova N.D, Grigoriev A.I (2011) Viability of barley seeds after long-term exposure to outer side of international space station Advances in Space Research 48(6):1155-1160

    292. Sugimoto T, Yoshida S, Kaga A, Hajika M, Watanabe K, Aino M, Tatsuda K, Yamamoto R, Matoh T, Walker D.R, Biggs A.R, Ishimoto M (2011) Genetic analysis and identification of DNA markers linked to a novel Phytophthora sojae resistance gene in the Japanese soybean cultivar Waseshiroge Euphytica 182(1):133-145

    293. 杉山恵太郎 , 日本典秀 , 大矢武志 , 二村友彬 (2011) DNA マーカーによるコナジラミ類寄生蜂 3 種の識別法の開発 日本応用動物昆虫学会誌 55(4):258-260

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    296. Suto J (2012) Quantitative trait loci that control plasma lipid levels in an F2 intercross between C57BL/6J and DDD.Cg-Ay

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    300. Suzuki N, Kim Y-M, Fujimoto Z, Momma M, Okuyama M, Mori H, Funane K, Kimura A (2012) Structural elucidation of dextran degradation mechanism by Streptococcus mutans dextranase belonging to glycoside hydrolase family 66 Journal of Biological Chemistry 287(24):19916-19926

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    研究の実施状況

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    301. Suzuki R, Fujimoto Z, Shiotsuki T, Tsuchiya W, Momma M, Tase A, Miyazawa M, Yamazaki T (2011) Structural mechanism of JH delivery in hemolymph by JHBP of silkworm, Bombyx mori Scientific Reports 1:133

    302. Suzuki R, Tsuchiya W, Shindo H, Yamazaki T (2011) NMR assignments of ubiquitin fold domain (UFD) in SUMO-activating enzyme subunit 2 from rice Biomolecular NMR Assignments 5(2):245-248

    303. Suzuki Y, Koshi K, Imai K, Takahashi T, Kizaki K, Hashizume K (2011) Bone morphogenetic protein-4 accelerates the establishment of bovine trophoblastic cell lines Reproduction 142(5):733-743

    304. Tabuchi H, Zhang Y, Hattori S, Omae M, Shimizu-Sato S, Oikawa T, Qian Q, Nishimura M, Kitano H, Xie H, Fang X, Yoshida H, Kyozuka J, Chen F, Sato Y (2011) LAX PANICLE2 of rice encodes a novel nuclear protein and regulates the formation of axillary meristems The Plant Cell 23(9):3276-3287

    305. Tada Y, Takezawa T, Tani A, Nakamura T, Omori K (2012) Collagen vitrigel scaffold for regenerative medicine of the trachea: Experimental study and quantitative evaluation Acta Oto-Laryngologica 132(4):447-452

    306. 髙林千幸 , 熊井敏夫 , 宮﨑栄子 , 中島健一 , 富澤順 (2011) シルク布団わた “ シルクフィル ” の開発とその特性 日本シルク学会誌 19:45-49

    307. Takada Y, Tayama I, Sayama T, Sasama H, Saruta M, Kikuchi A, Ishimoto M, Tsukamoto C (2012) Genetic analysis of variations in the sugar chain composition at the C-3 position of soybean seed saponins Breeding Science 61(5):639-645

    308. Takagi K, Nishizawa K, Hirose A, Kita A, Ishimoto M (2011) Manipulation of saponin biosynthesis by RNA interference-mediated silencing of β-amyrin synthase gene expression in soybean Plant Cell Reports 30(10):1835-1846

    309. Takahashi A, Fujiwara-Tsujii N, Yamaoka R, Itoh M, Ozaki M, Takano-Shimizu T (2012) Cuticular hydrocarbon content that affects male mate preference of Drosophila melanogaster from west Africa International Journal of Evolutionary Biology 2012:278903

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    311. Takahashi H, Saika H, Matsumura H, Nagamura Y, Tsutsumi N, Nishizawa N.K, Nakazono M (2011) Cell division and cell elongation in the coleoptile of rice alcohol dehydrogenase 1-deficient mutant are reduced under complete submergence Annals of Botany 108(2):253-261

    312. Takamizo T, Nakatsu S, Nagamura Y, Fujimori M, Tarumoto I (2012) Mapping of DNA markers linked to a thermosensitivity gene in sorghum Bulletin of NARO Institute of Livestock and Grassland Science 12:1-8

    313. Takano T, Yamaguchi S, Matsunuma E, Komiya S, Shinkai M, Takezawa T, Nagamune T (2012) Cell transfer printing from patterned poly(ethylene glycol)-oleyl surfaces to biological hydrogels for rapid and efficient cell micropatterning Biotechnology and Bioengineering 109(1):244-251

    314. Takeda K, Tasai M, Iwamoto M, Oe M, Chikuni K, Nakamura Y, Tagami T, Nirasawa K, Hanada H, Pinkert C.A, Onishi A (2012) Comparative proteomic analysis of liver mitochondrial proteins derived from cloned adult pigs reconstructed with Meishan pig fibroblast cells and European pig enucleated oocytes Journal of Reproduction and Development 58(2):248-253

    315. Takeda N, Maekawa T, Hayashi M (2012) Nuclear-localized and deregulated calcium- and calmodulin-dependent protein kinase activates rhizobial and mycorrhizal responses in Lotus japonicus The Plant Cell 24(2):810-822

    316. Takeda S, Kimura M, Marushima R, Takeuchi A, Takizawa K, Oino Y, Masuda Y, Kunou M, Hasegawa M, Maruyama C (2011) Mayonnaise contributes to increasing postprandial serum β-carotene concentration through the emulsifying property of egg yolk in rats and humans Journal of Nutritional Science and Vitaminology 57(3):209-215

    317. Takehisa H, Sato Y, Igarashi M, Abiko T, Antonio B.A, Kamatsuki K, Minami H, Namiki N, Inukai Y, Nakazono M, Nagamura Y (2012) Genome-wide transcriptome dissection of the rice root system: implications for developmental and physiological functions The Plant Journal 69(1):126-140

    318. Takeya M, Yamasaki F, Uzuhashi S, Kumagai M, Sawada H, Nagai T, Tomioka K, Sato T, Aoki T, Kawase M (2012) Development of a database of plant diseases in Japan and a system for making microorganism genetic resources and their DNA sequence data available to the research community Japan Agricultural Research Quarterly 46(2):193-198

    319. Takezawa T, Nishikawa K, Wang P-C (2011) Development of a human corneal epithelium model utilizing a collagen vitrigel membrane and the changes of its barrier function induced by exposing eye irritant chemicals Toxicology in Vitro 25(6):1237-1241

    320. Takumi S, Koyama K, Fujiwara K, Kobayashi F (2011) Identification of a large deletion in the first intron of the Vrn-D1 locus, associated with loss of vernalization requirement in wild wheat progenitor Aegilops tauschii Coss. Genes & Genetic Systems 86(3):183-195

    321. Tamura K, Kiyoshi T, Yonemaru J (2012) The development of highly transferable intron-spanning markers for temperate forage grasses Molecular Breeding 30(1):1-8

    322. Tanabata T, Hirose F, Hashikami H, Nobuhara H (2012) Interactive data mining tool for microarray data analysis using formal concept analysis Journal of Advanced Computational Intelligence and Intelligent Informatics 16(2):273-281

    323. Tanaka H, Sagisaka A, Fujita K, Furukawa S, Ishibashi J, Yamakawa M (2012) BmEts upregulates promoter activity of lebocin in Bombyx mori Insect Biochemistry and Molecular Biology 42(7):474-481

    324. Tanaka K, Endo M, Hirayama K, Okane I, Hosoya T, Sato T (2011) Phylogeny of Discosia and Seimatosporium, and introduction of Adisciso and Immersidiscosia genera nova Persoonia 26:85-98

  • 農業生物資源研究所 平成 23 年度年報

    研究の実施状況

    21

    325. Tanaka N, Itoh H, Sentoku N, Kojima M, Sakakibara H, Izawa T, Itoh J, Nagato Y (2011) The COP1 ortholog PPS regulates the juvenile-adult and vegetative-reproductive phase changes in rice The Plant Cell 23(6):2143-2154

    326. Tanaka S, Harano K, Nishide Y (2012) Re-examination of the roles of environmental factors in the control of body-color polyphenism in solitarious nymphs of the desert locust Schistocerca gregaria with special reference to substrate color and humidity Journal of Insect Physiology 58(1):89-101

    327. Tanaka T, Ohkura S, Wakabayashi Y, Okamura H (2012) Effect of peripherally administered kisspeptin-10 on GnRH neurosecretion into the hypophyseal portal circulation in ovariectomized goat does Small Ruminant Research 105(1-3):273-276

    328. Tanaka W, Toriba T, Ohmori Y, Yoshida A, Kawai A, Mayama-Tsuchida T, Ichikawa H, Mitsuda N, Ohme-Takagi M, Hirano H (2012) The YABBY gene TONGARI-BOUSHI1 is involved in lateral organ development and maintenance of meristem organization in the rice spikelet The Plant Cell 24(1):80-95

    329. Tanemoto T, Enosawa S, Takezawa T, Kitagawa M, Chiba T, Tanaka T (2011) Non-suture skin closure using collagen vitrigel membrane for future repair of endoscopic fetal myelomeningocele Organ Biology 18(3):292-296

    330. Terada D, Hattori S, Teramoto H, Kameda T, Tamada Y, Kobayashi H (2012) Silk nanofibre arranging improves its fibre mat transparency Bioinspired, Biomimetic and Nanobiomaterials 1(1):57-61

    331. Terakami S, Matsumura Y, Kurita K, Kanamori H, Katayose Y, Yamamoto T, Katayama H (2012) Complete sequence of the chloroplast genome from pear (Pyrus pyrifolia): genome structure and comparative analysis Tree Genetics & Genomes (Online First)

    332. Teramoto H, Kojima K, Kajiwara H, Ishibashi J (2012) Expansion of the amino acid repertoire in protein biosynthesis in silkworm cells ChemBioChem 13(1):61-65

    333. Thalor S.K, Berberich T, Lee S.S, Yang S.H, Zhu X, Imai R, Takahashi Y, Kusano T (2012) Deregulation of sucrose-controlled translation of a bZIP-type transcription factor results in sucrose accumulation in leaves PLoS ONE 7(3):e33111

    334. Tokuda G, Watanabe H, Hojo M, Fujita A, Makiya H, Miyagi M, Arakawa G, Arioka M (2012) Cellulolytic environment in the midgut of the wood-feeding higher termite Nasutitermes takasagoensis Journal of Insect Physiology 58(1):147-154

    335. Tomimoto K, Fujita K, Ishibashi J, Imanishi S, Yamakawa M, Tanaka H (2012) A novel method to convert a DNA fragment inserted into a plasmid to an inverted repeat structure Molecular Biotechnology 50(1):18-27

    336. Tomimoto K, Yamakawa M, Tanaka H (2012) Construction of a long hairpin RNA expression library using Cre recombinase Journal of Biotechnology 160(3-4):129-139

    337. Tomioka K, Hirooka Y, Sawada H, Aoki T, Sato T (2011) Plectosporium blight of monkshood caused by Plectosporium tabacinum Journal of General Plant Pathology 77(4):266-268

    338. Tomioka K, Sato T (2011) Fruit rot of sweet pepper caused by Stemphylium lycopersici in Japan Journal of General Plant Pathology 77(6):342-344

    339. Tomioka K, Sato T, Moriwaki J, Terasawa Y, Koganezawa H (2012) Anthracnose of bacopa caused by Colletotrichum destructivum Journal of General Plant Pathology 78(2):133-135

    340. Tsubokura Y, Hajika M, Kanamori H, Xia Z, Watanabe S, Kaga A, Katayose Y, Ishimoto M, Harada K (2012) The β-conglycinin deficiency in wild soybean is associated with the tail-to-tail inverted repeat of the α-subunit genes Plant Molecular Biology 78(3):301-309

    341. Tsuda M, Konagaya K, Okuzaki A, Kaneko Y, Tabei Y (2011) Occurrence of metaxenia and false hybrids in Brassica juncea L. cv. Kikarashina × B. napus Breeding Science 61(4):358-365

    342. Tucker M.R, Okada T, Johnson S.D, Takaiwa F, Koltunow A.M.G (2012) Sporophytic ovule tissues modulate the initiation and progression of apomixis in Hieracium Journal of Experimental Botany 63(8):3229-3241

    343. Uchino T, Takezawa T, Ikarashi Y, Nishimura T (2011) Development of an alternative test for skin sensitization using a three-dimensional human skin model consisting of dendritic cells, keratinocytes and fibroblasts Alternatives to Animal Testing and EXperimentation 16(1):1-8

    344. Uenishi H, Shinkai H, Morozumi T, Muneta Y, Jozaki K, Kojima-Shibata C, Suzuki E (2011) Polymorphisms in pattern recognition receptors and their relationship to infectious disease susceptibility in pigs BMC Proceedings 5(Suppl 4):S27

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    346. Uga Y, Hanzawa E, Nagai S, Sasaki K, Yano M, Sato T (2012) Identification of qSOR1, a major rice QTL involved in soil-surface rooting in paddy fields Theoretical and Applied Genetics 124(1):75-86

    347. 氏家和広 , 奥泉久人 , 高野誠 , 石丸健 (2011) 栄養成長期初期における子�