Foldfinder Web Server

인실리코 단백질 연구단최인실

flypani@kias.re.kr

목차

1. Foldfinder Web Server 소개2. 사용법3. Example4. DB 상세

FoldFinder Web Server

A web server for protein fold recognition based on profile-profile alignment using predicted secondary structure

http://lee.kias.re.kr/~newton/ffinder/index.html

사용법

1. Select DB

2. Job Name

3. E-mail

4. Sequence

5. Submit

6. Get e-mail

7. Get files

Example : select DB

Example : Job Name

Example : E-mail

Example : Sequence

* single sequence* multi sequence

사용법 : example

사용법 : example

사용법 : example

사용법 : example

pdb

DB 상세PDB.ORGPDB.ORG

LEELEE

data, derived_data / week

pdb info cluster95

List• method• resolution…

profile

fas dssp structure

ss3 ck2 scopck2

Binary : DB

pdb

DB 상세PDB.ORGPDB.ORG

LEELEE

data, derived_data / week

pdb info cluster95

List• method• resolution…

profile

fas dssp structure

ss3 ck2 scopck2

binary

Makeinfo.py

Step1.sh

Step2.sh

Make_ss3.sh Get_scinf.shMake_ck2.sh

Chk2bin.f90

make_list

감사합니다 .