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I••••• e-mail: [email protected]://www.bs.s.u-tokyo.ac.jp/~naibunpi/lab.html
• “Molecular Biology of the Cell” 5th Ed. Alberts et al., Garland Science, 2008
• “Ion Channels of Excitable Membranes” 3rd Ed. Hille, B. Sinauer Associates, 2001 (ISBN 0-87893-321-2) ,
• "Neuroscience“ 5th Ed., Editors: Dale Purves et al., Sinauer, 2012
• Companion Website (free)http://sites.sinauer.com/neuroscience5e
http://www.bs.s.u-tokyo.ac.jp/~naibunpi/Lecture_Index.html
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I
1.2.3. 3-1 3-24.5.6.7.8. *9.10. *11. GnRH
*
“ligand”
fast and precise
slow
Hydrophilic Hydrophobic(=lipophilic)
2004 Sinauer Associates, Inc.
Cell Animations¥neuro5e_0701.mov
2000 Sinauer Associates, Inc. 2004 Sinauer Associates, Inc.
http://sites.sinauer.com/neuroscience5e/animations07.01.html
G
GTP
2002 Alberts et al.
Molecular Biology of the Cell (© Garland Science 2008)
• serine/threonine kinases• tyrosine kinases
• GAPs: GTPase–activating proteinsRGS regulators of G protein signaling
GPCR desensitization• Receptor inactivation• Receptor sequestration• Receptor down-regulation
IP3
IP3cAMP
D2
2004 Sinauer Associates, Inc.
cAMP
intracellular pool of glucose transporters in specialized recycling endosomes
signal causes relocalization of glucose transporters to plasma membrane to boost glucose uptake into the cell
JAK-STAT
JAK
SH2
STAT
Nuclear signaling
Adrenaline
cAMPAMP
Protein phosphatase-I
Adrenaline
2002 Alberts et al.
B-adrenergic receptor
AMPG
(A) (B)
(C)
(D)B-adrenergic receptor
PDE
Animation
(C)(D)
Second Messenger Targets: Protein kinase C
2004 Sinauer Associates, Inc.
2002 Alberts et al.PKC
Second Messengers
2004 Sinauer Associates, Inc.
Second Messenger Targets: Ca2+calmodulin-dependent (CAM) kinase
X NMR Ca2+/calmodulin CaM-kinase II
CaM-kinase II Ca2+
2002 Alberts et al.
(A)
(B)
(C)
(D)
CNG (cyclic nucleotide-gated)
(A) (B)
(C)(D)
http://sites.sinauer.com/neuroscience5e/animations11.02.htmlhttp://sites.sinauer.com/neuroscience5e/animations15.01.html
cAMP-
Nuclear Signaling-
UAS: upstream activator site
transcriptional activator proteins=transcription factor
CREB=cAMP response element binding protein
CRE=cAMP response element (binding site on DNA)
CaRE=calcium response element
2004 Sinauer Associates, Inc. 2002 Alberts et al.
CRE
1
cAMP
2
cAMP3
RNA2004 Sinauer Associates, Inc.
cortisolestradiol
Vitamin D3
testosterone
thyroxin
Retinoic acid
Transcription of target genes
receptor-binding element
coactivator proteinsligand-binding domain
ligand
transcription-activating domain
DNA-binding domaininhibitory proteins
2002 Alberts et al.
Nuclear receptor superfamily
JAK-STAT signaling pathway
- Nuclear Signaling-
The constitutive and regulated secretory pathways
Secretion“on demand”
2002 Alberts et al.
dcv
dcv: dense-core vesicle
Structures of putative trafficking proteins of synaptic vesicles
Core complex (SNARE complex)
t-SNARE
v-SNARE
Ca2+ sensor
NSF: N-ethyl maleimide sensitive fusion protein, ATPaseSNAPs: small NSF attachment proteins (no relation to SNAP-25)SNARE: SNAP receptor (v- & t-SNARE)v (vesicle membrane); t (target membrane)
2004 Sinauer Associates, Inc.
(sec1/munc18-like =SM proteins)
(SNARE complex)
(SNARE complex)
Ca2+
GTP
SNARE complex(Core complex)
(Negative regulator )
Activation of SNARE complex Formation of
SNARE complexRecruitment of synaptotagmin
(closed )
(syntaxin open )
Ca2+
1999 Oxford University Press
SNARE complexes; paring and dissociation
Tetanus toxinBotulinum toxin
SNAP)Specific paring of t- and v-SNARE
2002 Alberts et al.
2002 Alberts et al. 2004 Sinauer Associates, Inc.
Endocytotic pathways and clathrin
Clathrin-coated pits and vesicles
The structure of clathrin coat
Secretory and endocytotic pathways
Clathrin triskelion2002 Alberts et al.
Clathrin coat
dynamin
clathrin coated
vesiclepinch off
Drosophila shibire mutant
mutant dynamin
(GTPase)
2002 Alberts et al.
Dynamin Home Page
2
Clathrin coat
Coated pit
Dynamin & Dynamin-binding proteins
Synaptic vesicles
Plasma membrane
Model of clathrin-coated synaptic vesicle recycling at the synapse
2001 Sinauer Associates, Inc.
LTP
intracellular pool of glucose transporters in specialized recycling endosomes
signal causes relocalization of glucose transporters to plasma membrane to boost glucose uptake into the cell
Exocytosis endocytosis
2002 Alberts et al.
2001 Sinauer Associates, Inc.
GABA
GABAA
GABAA
GABAA
Vithlani et al., 2011
Techniques for monitoring exocytosis
1 F/cm2 (0.01pF/ m2)
1999 Oxford University Press
dE/dt=Ic/C=-E/RC
E=E0 exp(-t/RC) RC=
Ic=Cm dV(t)/dtV(t)=V0sin( t)Ic(t)= CmV0sin( t+90 )
1999 Oxford University Press
2001 Sinauer Associates, Inc.
Measurements of exocytosis by monitoring membrane capacitance and the release of vesicular contents by measuring amperometric currents
(serotoin)
Vh=+700mV
foot”
Mast cell
Caged Ca2+GTP S
2001 Sinauer Associates, Inc.
Exocytosis observed in living cells and in EM
Total Internal Reflection Microscopy (TIRM)“Evanescent wave”
2001 Sinauer Associates, Inc.
1999 Oxford University Press
Monitoring exocytosis and endocytosis in living cells
“kiss and run” events
2001 Sinauer Associates, Inc.
Imaging synaptic vesicle dynamics with the styryl dye FM1-43
FM dyes 1) reversibly stain membranes; 2) are impermeable to membranes; 3) are more fluorescent when bound to membranes than when in solution.
2000 Cold Spring Harbor Laboratory Press
2001 The Johns Hopkins University Press
Time (s)
Mem
bran
e po
tent
ial (
mV
)
Sperm
200 400 600
-10
-20
-30
-40
-50
-60
-70
-80
0
Fertilization potential and [Ca2+]i of sea urchin egg (Hemicentrotus pulcherimus)
Phase I
Phase II
Phase III
600005000040000Time (ms)
Volta
ge(m
V)
-80
-70
-60
-50
-40
-30
-20
-10
1 2 3
4 5 6
7 8 9
12 3 4
5678
9
Measurements of vesicle dynamics with activity-dependent styryl dyes
RH-414 labelling of sea urchin egg at rest
fertilized
unfertilized
DIC imagesDifferential
Interference Contrast
FM1-43 fluorescence
1999 Oxford University Press