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MAPPING CONTROVERSIES/ COMMON PLATFORM ANDREI MOGOUTOV | AGUIDEL

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Page 1: MAPPING CONTROVERSIES/ COMMON PLATFORM ANDREI MOGOUTOV | AGUIDEL

MAPPING CONTROVERSIES/ COMMON PLATFORM

ANDREI MOGOUTOV | AGUIDEL

Page 2: MAPPING CONTROVERSIES/ COMMON PLATFORM ANDREI MOGOUTOV | AGUIDEL

COMMON PLATFORM/Scientific Controversy « Spaces »

› News Streams› Blog Sphere› Web Sites› E-Communication (Mailing Lists, Forums)› Scientific Information Data Bases (Publications, Patents)

› Offline “Literature”› Surveys/ Interviews› Traditional Media (TV, Radio)› Specific Data Bases› Etc ?

Page 3: MAPPING CONTROVERSIES/ COMMON PLATFORM ANDREI MOGOUTOV | AGUIDEL

Heterogeneous Data Sets ?• Heterogeneity by source

– Heterogeneous data means diverse types of data from different sources. For example, databases, surveys, questionnaires with open questions and codified variables, interviews and text collections.

• Heterogeneity by constitution – Heterogeneous data is not only from various sources, it is also

varied internally. Thus different variables are represented within data sets. For example, geographic location, personal profiles, institutional affiliation, or semantic and lexical units. Software help users and analysists to understand relations of a multivariate nature between entities. It is the ‘hidden’ relations and dependencies within your data that the analysis makes evident.

• Heterogeneity by structure– In today’s world, complexity and diversity of data is unparalleled.

Software works with this dynamism, from highly codified and detailed databases to survey data with numerical variables onward to ‘raw’ data.

• Heterogeneity by scale– Analytical solutions help you to negotiate and manage heterogeneity

by source, constitution, structure, and of course, scale. Thus from global level of analysis and interconnection to the institutional, specific, and individual level, software makes data visible.

Analytical methods and software tools for the treatment of heterogeneous data within a unified framework.

Page 4: MAPPING CONTROVERSIES/ COMMON PLATFORM ANDREI MOGOUTOV | AGUIDEL

../ANALYTICAL DIMENSIONS

ANALYTICAL DIMENSIONS/DATA/METHODS/TOOLS

SPACE TIME CONTENT ACTORS & NETWORKS

X USERS Client side Apps

News RSS Feeds Client side Apps News

Client side Apps News, Web search, Blogs

SUBSCRIBED UDERS

Client/Server Apps RSS Feeds archives

Client/Server Apps News RSS Feeds archives

Client/Server Apps Client side Apps News archives, Web search, Blogs

Client/Server side Apps RSS Feeds archives + Scientometrix

SPECIAL CONTRACT

Client/Server side Apps + offline apps archives + Scientometrix + third party tools + specific GIS analysis

Client/Server side Apps + offline apps archives + Scientometrix + third party tools + specific time analysis

Client/Server side Apps + offline apps archives + Scientometrix + third party tools + specific content analysis

Client/Server side Apps + offlina apps archives + Scientometrix + third party tools + specific analysis

DEVICES SERVICES

DIAGNOSTICS

GENOMICS

DRUG DELIVERY

LARGE MOLECULE

SMALL MOLECULE

PROTEOMICS

RECOMBINANT DNA

ANTIBODY

MOLECULAR DIVERSITYSCREENING

GENE THERAPY

SYNTHESIS

VACCINES

GENE EXPRESSION

GENERICS OTC

CELL THERAPY

AVENTIS

GLAXO

BIOINFORMATICS

J OHNSON

ROCHE

APPLERA

PFIZER

AHP

BMS

NOVARTIS

GENE SEQUENCING

GENZYME

AMERSHAM

ABBOTT

INCYTEG

MERCK_CO

PHMACIA

CHIRON

TRANSGENICS

NIH

ELAN

BAYER

ELILILLY

AFFYMET

NUTRACEUTICALS

ASTRAZEN

GENENTEC

SCHER_AG

CELLTECH

SCHERING

MILL_PHA

PERKIN

BAXTER

NANOTECHNOLOGY

PCOP

AMGEN

MEDAREX

RATIONAL DRUG DESIGN

MERCK

BOEHRING

LEXICON

VERTEX

SEQUENOM

APP_BIOS

UN_CAL

E.I. DU

CORIXA

VALENTIS

BD MONSANTO

ARQULE

NATURAL PRODUCTS

DYAX

ABGENIX

NOVO NOR

HU_GE_SC

LION_BIO

ISIS

GENE_LOG

MDS

OXFGLYCO

CYTOGEN

MEDIMMUN

UNIV_TEX

ORCHID

INDEVUS

TREGA

BASF

GENOME

HARV_UNI

TGEN

EXELIXIS

J H_UNIV

AKZO

CARBOHYDRATE

CELL_PAT

BIOGEN

SUSM

MYRIAD

DPI

HMS

EVOTEC

TYCO_INT

SANOF_S

CAMBTECH

SANGAMO

BIOVAIL

QIAGEN

GENSET

BECKMAN

MIT

INVITROG

CHUGAI_B

OSI

MITSUB

IMMUNEX

TRIPOS

LIGAND

IMCLONE

ACAMBIS

P & G

CANC_RC

NEXSTAR

OXFBIOM

AURORA

XOMA

XENOVA

ENZON

AVANT

LYNX_USA

WATSON

E-HEALTH

MEDTRONI

MORPHOSY

THIRD_WA

GILEAD

SCIOS

DOUBLETW

HYSEQ

CURAGEN

SHIRE

SEPRACOR

CRUCELL

AMERNYCO

SKYEPH

MSKC_CEN

ANTIGENI

VICAL

THERMO_E

GENELABS

IVAX

DELTAGEN

GPC_BIOT

TULARIK

DOW_CHEM

GENVEC

PDL

NEORX

STEMCELL

CORNING

EPIMMUNE

HITACHI

BIO_TG

BAY_C_M

ALEXION

YAMANOUC

DUHS

IDEC

CUBIST

NEXELL

CEPHALON

FUJ ISAWA

TAKARA

LUDWIG_I

LIFE_TEC

GERON

NEOPROBE

PPD

ALLIANCE

SERONO

PROTSYS

TEVA

VARIAGEN

SOLVAY

CHRYSALI

DAIICHIP

DECODE

REPLIGEN

QUIDEL

SCHWARZ

TAKEDA

BIOSITE

YALE_U

UCSF

CELGENE

IMMUNOME

BIOMIRA

ROBERTS

ALLERGAN

PROGENIC

NPS

KIRIN

IMMUNOGE

ONCOR

AMRAD

DIVERSA

SCRIPPS

ICOS

ALKERMES

PITTSB_U

CURIS

POWDERJ

MYLAN

ID_BIOME

NANOGEN

BTG_PHAR

MEDIGENE

NEUR_BIO

UCSD

J TOBACCOKING

SANKYO

PEREGRIN

SUMITOM

MAXIGEN

IMMUNE

SOMATIX

SICOR

ONCORMED

BIOMERIE

HYBRIDON

UCLA

RIBOZYME

AD_POLY

NABI

AMYLIN

SUPERGEN

ICN_PHAR

IGEN

TAISHOPH

NYU

ACACIA

MGH

BIOCHEMP

U_WASH

SEQUUS

CAM_BIO

CELL_GEN

CYTRX

INHALE

RECORDAT

WASH_U

ANADYS

KYOWA

INSITE

BIO_RAD

3M

DEGUSSA

AASTROM

MAR_UN

GENTA

PROTHER

MCGILL_U

ALBANYMR

BBIOTECH

SYNCOR

AVANIR

ANTARES THERATEC

DSM_GIST

EISAI

CARDINAL

AMARINPHARMASC

PENEDERM

ALTANA

BIOGLAN

BOSTON_S

CENES

UNIV_COL

COLUMBIA

MAYO_FOU

MARTEK

COLLAGEN

LIPOSOME

IBM

MAX_PLAN

DUPONT_M

CORTECS

ADVMAG

DAINIPP

CYGNUS

MILLENN

ABSC

GENENCOR

ATRIX

UNIV_TR

BERLEX

UCB_GROU

BAUSCH

ENTREMED

OXFORD_U

CONNETIC

MGI

FISHER_S

MAYNE

ILEX

TRIANGLE

DRAXIS

VIRAGEN

TEIJ IN

MERI_BIO

ACCESS

DADEBE

GEN_EL

FOREST

TANABESE

MEDICIS

Pasteur

PHOTOTHERAPY

FRESENIU

ONO_PHAR

STERL_DR

PH_RES

QUESTCOR

AJ INOMO

MUNDIPHA

MICHIG_U

MEIJ I

DYNAGEN

SYNBIOTI

SENETEK

QUINTILE

MASS_GEN

PIERRE

NRC_CAN

NESTLE

COLLAGEX

CHIESI

AMERISB

XENOGEN

HESKA

CHEMTRAK

PHARMAS

BARR_LAB

OTSUKA

BENTLEY

PROVALIS

BTG

ASAHI

NYCOMED

SUNY

MERCKLE

GUILFORD

BEAUFOUR

ELF_AQUI

INTEG_LS

AD_TS

US_BIOSC

LUNDBECK

HSC

EPITOPE

WELLCOME

COCENSYS

SYNSORB

ALPHARMA

MEDCO_R

ORION

SMITH

KISSEI

AXCAN

AMARILLO

UNITED_T

SHIONOGI

SPECTRAL

CORNELLU

SUNTORY

AMBI

BCU

MYCOGEN

GELTEX

NCI

FERRER

BOOTS CO

PAREXEL

Page 5: MAPPING CONTROVERSIES/ COMMON PLATFORM ANDREI MOGOUTOV | AGUIDEL

..Traditions_Methods_Solutions

› Statistics / Data Mining› Textual Analysis Tools / Text Mining

› Web Cartography› Scientometrics› Tools for Qualitative Data Analysis

› Social / Socio-Technical Networks

› GIS

Page 6: MAPPING CONTROVERSIES/ COMMON PLATFORM ANDREI MOGOUTOV | AGUIDEL
Page 7: MAPPING CONTROVERSIES/ COMMON PLATFORM ANDREI MOGOUTOV | AGUIDEL

/Scientometrics/Sources

PubMed (Medline)

Web Of Science - ISIDownload Tagged or XML file

Page 8: MAPPING CONTROVERSIES/ COMMON PLATFORM ANDREI MOGOUTOV | AGUIDEL

/Scientometrics/results (ReseauLu SciMetrix)

1

10

100

1000

1984 1985 1986 1987 1988 1989 1990 1991 1992 1993 1994 1995 1996 1997 1998 1999 2000 2001 2002 2003

20Proceedings of the National Academy of

Sciences of the United States of America

22Environmental Entomology

23Biofutur

23Current Science

26Euphytica

27Science

28Molecular Breeding

30OCL - Oleagineux, Corps Gras, Lipides

32Nature Biotechnology

32Transgenic Research

33Molecular Ecology

33Nature

37Biotechnology and Development Monitor

41Theoretical and Applied Genetics

98Journal of Economic Entomology

N. Art.Top Journals

20Proceedings of the National Academy of

Sciences of the United States of America

22Environmental Entomology

23Biofutur

23Current Science

26Euphytica

27Science

28Molecular Breeding

30OCL - Oleagineux, Corps Gras, Lipides

32Nature Biotechnology

32Transgenic Research

33Molecular Ecology

33Nature

37Biotechnology and Development Monitor

41Theoretical and Applied Genetics

98Journal of Economic Entomology

N. Art.Top Journals

selectable markers

biosafetyOil plants

rape

weeds

herbicides

herbicide resistance

gene flow

Insect pests

pest resistancegenes

gene expression

agricultural entomology

risk assessment

release

control

plant pests

glufosinate

maize

Pest control

transgenics

potatoes

reviews

resistance

interspecific hybridization

plant pathogensplant pathology

food safety

w ild relatives

polymerase chain reaction

plant diseases

tobacco

foods

DNA

stimulant plants

plant breeding

hybridization

risk

disease resistance

molecular genetics

soyabeans

Biology

pollen

entomopathogenic bacteria

root crops

genetics

toxins

glyphosate

nontarget effects

legislation

natural enemies

environmental impact

sugarbeet

Pathogenstomatoes

cereals

intergeneric hybridization

enzymes

regulations

bacterial insecticidescultivars

toxicity

rice

entomopathogensvegetables

tolerance

chemical control

pesticides

gene transfer

insect control

public opinion

coat proteins

plant genetic resources

biological control agents

dispersal

biological control

seed production

survival

genetic markers backcrossing

larvae

detection

sugar crops

weed control

phosphinothricin acetyltransferase

microbial pesticides

swede rape

pollination

parasitoids

lectins

insecticides

nucleotide sequences

trypsin inhibitors

ecology

analytical methods

volunteer plants

introgression

proteinase inhibitors

European Union

Herbicide resistant weedscrop plants as weeds

reporter genes

methodology

plant pathogenic fungi

labelling

nontarget organisms

allergens

flowering

plant parasitic nematodes

invasion

lines

evolution

food allergies safety

oilseed plants

growth

effects

promoters

plant pathogenic bacteria

agglutinins

genomes

fruitsfood products

models

leaves

consumer attitudes

contamination

marker genes

population dynamics

beta-glucuronidase

population genetics

Potyvirus

proteins

food legislation

Mol. Biol. and Virol.

Detection

Agr. entomology

Weed management - geneflow

GM Food safety

Page 9: MAPPING CONTROVERSIES/ COMMON PLATFORM ANDREI MOGOUTOV | AGUIDEL

/tools (ReseauLu X2 SciMetrix)

Page 10: MAPPING CONTROVERSIES/ COMMON PLATFORM ANDREI MOGOUTOV | AGUIDEL

/tools (ReseauLu X2 SciMetrix)

Page 11: MAPPING CONTROVERSIES/ COMMON PLATFORM ANDREI MOGOUTOV | AGUIDEL

Webmapping/IssueCrawler

IssueCrawler Project – GovCom.Org, Amsterdam (R Rogers et al)

Page 12: MAPPING CONTROVERSIES/ COMMON PLATFORM ANDREI MOGOUTOV | AGUIDEL

News/Blog/Web mapping (RSS feeds) by ReseauLu

North Korea + Regime Change North Korea + Reunification

North Korea + Nuclear

North Korea + Axis of Evil

North Korea + Human Rights

North Korea + Famine

North Korea + War

MSNBC

Korea Times

New York Times

Asia Times Online

Korea Herald

Channel News Asia

Financial Times (subscription)

Frontpagemag.com

Voice of America

Washington Times

Daily Times

Taipei Times

Radio Free Asia

Reuters

San Francisco Chronicle

Chosun Ilbo

SpaceDailyFOX News

Donga

CNN Asia

Stuff.co.nz

Guardian

IranMania News

J apan Today

Minneapolis Star Tribune (subscription)

Arms Control Today

Louisville Courier J ournal

Atlanta J ournal Constitution

Washington Post

GoAsiaPacific.com

International Herald Tribune

Wired News

J apan Times

American Daily

eTaiwan News

CNN

Aljazeerah.info

Rocky Mount Telegram

Reuters AlertNet

Straits Times

Tech Central Station

CNN International

Whitehouse.gov (press release)

The Militant

Toronto Star

Newsweek

Newsday

New Zealand Herald

ABC Online

Telegraph.co.uk

North Korea + Axis of Evil

North Korea + Famine

New York Times

Channel News Asia

Daily Times

Reuters

Atlanta J ournal Constitution

GoAsiaPacific.com

International Herald Tribune

Wired News

Tech Central Station

Toronto Star

New Zealand Herald

Telegraph.co.uk

XML (RSS) output from Yahoo Newshttp://api.search.yahoo.com/NewsSearchService/V1/newsSearch?appid=mogoutov&query=biotech&results=50&language=en

Page 13: MAPPING CONTROVERSIES/ COMMON PLATFORM ANDREI MOGOUTOV | AGUIDEL

Blogs/Web/Context search etc

Page 14: MAPPING CONTROVERSIES/ COMMON PLATFORM ANDREI MOGOUTOV | AGUIDEL

../NewsMosaic

Alpha versionInput – RSS data from image search engine Use/navigation: enter query, press “Submit” button – load dataTo be developed fro the beta version – article browser, date/relevance sorting

Page 15: MAPPING CONTROVERSIES/ COMMON PLATFORM ANDREI MOGOUTOV | AGUIDEL

../NewsSourcerer

alpha version (almost beta)Input – RSS data from image search engine Enter queries, press “Submit” button – load dataTo be debugged/finalized: selection of news by date (source depending)

Page 16: MAPPING CONTROVERSIES/ COMMON PLATFORM ANDREI MOGOUTOV | AGUIDEL

../Geotemporal Analysis

alpha versionInput – XML file with publication data (Nb publications per country/ area) OR Google News RSS (New!)Navigation: Submit button – load data, arrows zooming, time scaleTo be developed for the beta version: data/abstract/article browser, subgroup legend

Page 17: MAPPING CONTROVERSIES/ COMMON PLATFORM ANDREI MOGOUTOV | AGUIDEL

../News Monitor

alpha versionInput – XML file with publication data (Nb publications per country/ area)Navigation: Submit button – load data, arrows zooming, time scale, zoomTo be developed for the beta version: data/abstract/article browser

Page 18: MAPPING CONTROVERSIES/ COMMON PLATFORM ANDREI MOGOUTOV | AGUIDEL

../NewsMap (mapservices.org)

Page 19: MAPPING CONTROVERSIES/ COMMON PLATFORM ANDREI MOGOUTOV | AGUIDEL

Interactive Communication of Results – TimeLine App

Edit the XML file

Insert Flash Objet into Online Report

Page 20: MAPPING CONTROVERSIES/ COMMON PLATFORM ANDREI MOGOUTOV | AGUIDEL

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Thanks,

Andrei