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Principle of Real-Time qPCR Principle of Real-Time qPCR A A ND ND Applications Applications Han-Oh Park, Ph.D. President & CEO BIONEER CORPORATION

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  • Principle of Real-Time qPCR

    AND

    Applications

    Han-Oh Park, Ph.D.

    President & CEO

    BIONEER CORPORATION

  • - -

    Principle of Real-Time

    qPCR AND Applications

    Exicycler

    Understanding Real Time PCR Data

  • (2007 6 )

    (BIONEER CORPORATION) 49-3175 1992 8 28 5,67511,350,000 (1 500)www.bioneer.co.kr 116(06), 100(05), 92(04)

    [ ]57702523175[ ]16485556175

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  • Principle of Real-Time qPCR

  • Principle of PCR

    Basics of PCR

    Polymerase

    Primer

    Extension

    72

    Cycling

    Cycling

    1 Cycle

  • Principle of PCR

    Cockerill FR III. Arch Pathol Lab Med. 2003;127:1112

  • Basics of PCR

    Disadvantages of PCR

    End-Point PCR analysis is not quantitative

  • Disadvantages of PCR

    What is Wrong with Agarose Gels?

    Poor precision

    Low specificity

    Size-based discrimination only

    Low sensitivity/Resolution

    Short dynamic range (< 2 logs)

    Possibility of human errors

    Cross-contamination

    Results are not expressed as numbers

    Ethidium bromide staining is not very quantitative

    1. The problem of traditional quantification when using agarose gel

  • Real-Time PCR

    Real-Time PCR

    Real-time PCR monitors the fluorescence emitted during the reaction as an indicator of amplicon production at each PCR cycle (in real time) as opposed to the endpoint detection

  • 2. Optical

    Components

    3. Thermal

    Cycler

    1. Fluorescence

    Dyes

    Key components of Real-Time qPCR

    Principle of Real-Time PCR

    Real-

    Time

    qPCR

  • Nigel Walker, NIEHS

    Principle of Real-Time PCR

  • Real-time PCR vs. Conventional PCR

    Advantage of Real-Time PCR

    Real-Time PCRPCRSensitivityHighLowSpecificityHigh-use specific probesLow-only size discriminationQuantitative resultsYes-Specific fluorescenceNo-EtBr stainingDetection methodProbe-specific FluorescenceAgarose gelElectrophoresisDetection rangeWide rangeShort range (

  • Amplification plot: The plot of cycle number vs. fluorescence signal which correlates with the initial amount of target nucleic acid during the exponential phase of PCR

    Baseline: The initial cycles of PCR during which there is little change in fluorescence signal (usually cycles 3 to 15)

    Glossary of Real-Time PCR

    Baseline

    Threshold

    Ct

    Amplification plot

    cycle

    Fluorescence

    1. Terminology and definition used in real time PCR

  • Threshold: the fluorescence measurement at which product can be distinguished from background. Threshold should be set in the region associated with an exponential growth of PCR product

    Ct (Threshold cycle): The cycle number at which the fluorescence generated within a reaction crosses the threshold. It is inversely correlated to the log of he initial copy number

    Glossary of Real-Time PCR

    Baseline

    Threshold

    Ct

    Amplification plot

    cycle

    Fluorescence

    1. Terminology and definition used in real time PCR

  • Detection Chemistry

    1. Introduction of Exicycler

  • Primer & Probe

    Primer

    Short (Often < 50 nt) oligonucleotide sequence of DNA

    Complementary to the beginning and the end of the target DNA sequence

    Needed to initiate the synthesis of new DNA in a PCR reaction

    Involved in AMPLIFICATION

    Probe

    A single-stranded DNA with a specific base sequence

    Labeled with fluorescence dyes (TaqMan probe)

    Used to detect the complementary base sequence of target DNA/RNA by hybridization

    Involved in DETECTION

    Reporter dye / Quencher dye

    Primer

    Probe

  • Detection Chemistry

    DNA binding agents

    - Intercalating method: SYBRGreen I

    Fluorescent dyes

    Hydrolysis Probe

    - TaqMan probe, Molecular Beacon

    Hybridization Probe

    - Dual oligo FRET probes

    Primer based Probe

    - Scorpion

  • Intercalating dye fluoresces more brightly when bound to dsDNA.

    DNA binding dyes are inexpensive compared to the other probes.

    SYBR Green I, EtBr

    Intercalating method

    SYBR Green dye

  • Intercalating method

    SYBR Green dye

    1. Advantages:

    - Cheap, easy to use

    - Does not inhibit the reaction of amplification

    - Does not require any fluorescent probe

    - Does not require any particular expertise for the design of the probes

    - Is not affected by mutations in the target DNA

    2. Disadvantages:

    - Impossible to make sure of specificity of amplicons

    - Bad pairing can lead to positive forgeries or an over-estimate of the

    quantification

    - Still unspecified mutagen capacity

  • Fluorescent reporter dye at the 5 end is quenched by fluorescent quencher dye at the 3 end.

    When amplification occurs the TaqMan probe is degraded due to the 5'-->3' exonuclease activity of Taq DNA polymerase, thereby separating the quencher from the reporter during extension.

    The TaqMan assay accumulates a fluorescence signal.

    TaqMan probe

    TaqMan Probe

  • TaqMan probe

    TaqMan Probe

    1. Advantages:

    - Increased specificity

    - Better capacity of multiplexing

    2. Disadvantages:

    - Little expensive (dual-labeled probe)

    - Less effective and less flexible compared to other techniques in the

    real-time detection of specific mutation

    - Require the design of probes

  • A molecular beacon begins as a stem-and-loop structure. The sequences at the ends of the probe match and bind, creating the stem

    When the probe binds to a single-stranded DNA template, the structure unfolds, separating the quencher from the dye and allowing fluorescence.

    Molecular Beacon

    Molecular Beacon Probe

  • Molecular Beacon

    Molecular Beacon Probe

    1. Advantages:

    - Increased specificity

    - High flexibility for probe design

    - As the probes are not hydrolyzed, they are used at each cycle

    2. Disadvantages:

    - Little expensive (dual-labeled probe)

    - Less effective and less flexible compared to other techniques in the

    real-time detection of specific mutation

    - Require the design of probes

  • FRET method designed two specifically probe. It labeled with different dyes, such as at the 5 end of donor probe and at the 3 end of acceptor probe.

    At close proximity, the donor dye is excited by the light source and the energy is transferred the acceptor dye. Subsequently, fluorescent light is emitted at a different wavelength.

    Hybridization Probe (FRET)

    FRET Probe

  • Applications of Real-Time PCR

    1. Introduction of Exicycler

  • Real-Time PCR Applications

    Clinical Diagnostics

    - Bacterial/ Viral pathogen detection

    - Absolute pathogen quantification

    Drug therapy efficacy / drug monitoring

    Differential gene expression

    RNAi

    - siRNA validation

    SNP Genotyping

    Others

    - Food pathogen testing

    - Forensic studies

  • Real-Time PCR Applications

    Structural AssayUses DNA, typically genomic extractionsSingle Nucleotide Polymorphism

    Functional AssayUses RNA extractionsUses reverse transcriptase to generate cDNA templatesDifferential expressionDiagnostics involving gene expressionRNA interference

    Clinical Diagnostic AssayUses DNA or RNA extracted from patients samplesViral/bacterial pathogens

  • Quantification Strategies

    Absolute quantification

    - Used to quantitate unknown samples by interpolating their

    quantity from a standard curve.

    - The standard is a known DNA sample whose concentration is

    known absolutely.

    - The accuracy of the absolute quantification assay is entirely

    dependent on the accuracy of the standards.

    Relative quantification

    - Used to analyze changes in gene expression in a given sample

    relative to another reference sample.

    - A comparison within a sample (DNA or cDNA) is made with the

    gene(s) of interest to that of an endogenous control gene.

    - Quantification is done relative to the control gene.

  • Detection of specific genes in pathogens (virus, bacteria, fungi, etc) isolated from patients samples

    Quantification: copy numbers of infected pathogens

    Therapeutic Drug Monitoring/Screening

    Varicella-Zoaster Virus Real-Time PCR

    106 copies

    Absolute Quantification

    Pathogen Detection/Clinical Diagnostics

  • The Ct value correlates strongly with the starting copy number.

    It is linear with the log of starting DNA concentration.

    Ct value

    Absolute Quantification

    Sample 1

    Ct:14

    Conc: 2,500copy

    Threshold

    Absolute Quantification

  • Compares transcriptional levels of genes between control and experimental samples

    - Tissue distribution of target gene

    - Drug screening/Drug efficacy

    - Gene expression profiling after drug treatment

    Endogenous controls are used to normalize the data

    Endogenous controls are genes common to both control and experimental samples that do not change their expression levels under the experimental conditions

    - GAPDH

    - -Actin

    - 18s ribosomal subunit

    Differential Gene Expression

    Relative Quantification

  • Experiment Design (Traditional / Relative quantification)

    PCR using same amount of mRNA after spectrophotometer quantification

    Cell line A

    mRNA

    Cell line A + Drug

    mRNA

    Relative Quantification (PCR)

  • Experiment Design (Real-Time PCR /Relative quantification)

    Cell line A

    Cell line A + Drug

    Relative Quantification (Real-Time PCR)

  • Actin

    Target

    Actin

    Target

    A > B (21 : 2 times much)

    Sample A : 16 Ct

    Sample B : 17 Ct

    => Delta Ct = 1 Ct

    A > B (24 : 16 times much)

    Sample A : 17 Ct

    Sample B : 21 Ct

    => Delta Ct = 4 Ct

    Relative Quantification (Drug-induced gene expression)

    Control cell lines

    Control cell lines

    + Drug A

    Drug A treatment induced decreased target X gene expression

    Relative Quantification

  • Relative Quantification (Tissue distribution / Delta Ct Methods)

    Brain tissue

    Liver tissue

    Actin Target X

    Actin Target X

    Actin : 17 Ct

    Target : 21 Ct

    => Delta Ct = 4 Ct

    Actin : 22 Ct

    Target : 26 Ct

    => Delta Ct = 4 Ct

    Relative Quantification

  • Single Nucleotide Polymorphism (SNP)

    DNA sequence variations that occur when a single nucleotide (A, T,

    C, or G) in the genome sequence is altered

    How many SNPs are there in humans today?

    - Human mutation rate is ~ 2.5 x 108 mutation/site/generation

    - ~150 mutations/diploid genome/generation

    - 6.3 billion people in the world = 945,000,000,000 mutations in the

    world today

    The most common type of sequence difference between alleles

    Provide a way to detect direct associations between

    allelic forms of genes and phenotypes

    SNP Genotyping

  • Allelic Discrimination Assays (Single Nucleotide Polymorphisms)

    G

    G

    C

    C

    T

    T

    A

    A

    SNP Genotyping (Real-Time PCR)

  • SNP Genotyping (Real-Time PCR)

    A

    A

    A

    T

    T

    T

    G

    G

    G

    C

    C

    C

  • RNA interference:

    double stranded RNA (siRNA) forms a complex (RISC) that binds to target mRNA and leads to its degradation

    Target gene expression can be quantified by Real-Time PCR

    RNAi: siRNA validation

  • Multiplex Analysis

    Different dyes for each target (Example: FAM, TET, VIC and JOE)

    Real-time detection of four different retroviral DNAs in a multiplex format.

    Each reaction contained four sets of PCR primers specific for unique HIV-1, HIV-2, HTLV-I, and HTLV-II nucleotide sequences and four molecular beacons, each specific for one of the four amplicons and labelled with a differently coloured fluorophore.

    HIV-1: Fluorescein

    HIV-2: Tetrachlorofluorescein

    HTLV-1: Tetramethylrhodamine

    HTLV-II: Rhodamine

    Vet JA et al. PNAS (1999)

  • Improving Reproducibility

    Use clean bench (hood) Use aerosol resistant tips Use calibrated micropipettors Use large volumes (5L and up) Pipette into each reaction vessel once

    Good Technique

    Poor Technique

    Same Reagents, Different Results

  • Special Features of ExicyclerTM

  • The ExicyclerTM is a real time PCR system developed by Bioneer. The ExicyclerTM is equipped with an optical system that fits above the thermal cycler. It readily utilizes most fluorescent dyes, providing the widest choice of excitation / emission wavelengths. It can also be used as a standard thermal cycler for general PCR reactions.

    Real Time Quantitative Thermal Block

    Exicycler

  • Superior optic module

    Light pipe technology (patented)

    Light source

    Short Arc Lamp

    Life: 3,000 hrs

    High Power, high quality, low maintenance

    Excitation filter

    Six position (blank 1, filter 5)

    Wavelength range: 490-640nm

    5 multiplexing

    4) Emission filter

    Six position (blank 1, filter 5)

    Wavelength range: 520-670 nm

    5 multiplexing

    Powerful 2D CCD detector

    High resolution and great sensitivity

    Resolution : 325K pixel

    Thermal gradient

    Characteristics of ExicyclerTM

  • Superiors of ExicyclerTM

    Analysis can be viewed in real time.

    Melting curve can also be viewed in real time.

    Thermal gradient is compatible.

    Range of fluorophore excitation and emission is 490~670 nm.

    It can be used for multiplexing with 5 different fluorophores.

    Reliable results without using reference dye.

    Not necessary to decontaminate the sample block.

    96 samples can be tracked simultaneously.

    All data is accessible as Excel file and jpg image.

    Result reports, everyone can open on internet explorer.

    Software is friendly to beginner at qPCR.

    USB communication interface.

    Auto loading.

  • Patents of ExicyclerTM

    Real time monitoring apparatus for amplified nucleic acid product

    Appl. Con. : ROK

    Appl. Date: Jun. 18, 2002

    Appl. No. : 10-2002-0033965

    Real time monitoring apparatus

    Appl. Con. : ROK

    Appl. Date : Apr. 3, 2003

    Appl. No. : 10-2003-0021145

    *

  • Optic module of ExicyclerTM

    Light pipe

    Camera lens

    Lamp

  • Comparison of Optics

    Exicycler

    Other Company

    More homogeneous light intensities among wells

    => Reliable results without using reference dye

  • Comparison of Optics

    Exicycler

    Other Company

    Without reference dye

    With reference dye

    Without reference dye

  • Diversity of fluorescence dyes

  • Classified by light sources

  • Classified by light source

  • Classified by sensor and thermal cycling

  • Classified by sensor and thermal cycling

  • Market trend

  • Comparison

    NameiCyclerSmartCyclerRotorGeneLightcycler2ABI7500Opticon 2ExicyclerCompanyBio-radCepheidCorbettRocheApplied biosystemMJ researchBioneerDetectionSimultaneousSimultaneousSequentialSequentialSimultaneousSequentialsimultaneousType96 well16 tube32, 72 tube32 capillary96 well96 well96 wellGradientOxOOLightsourceTungsten Halogen LampLEDLEDBlue LEDTungsten Halogen LampLEDShort Arc lampDetector10 bit CCDSiliconPhotodetectorPMTPhoto-hybrid10 bit CCDPMT16 bitCCDEx /Emrange400~700 450~650 470~660 470~710 488~650 470~700 490~670 Multiplex4 color 4 color4 color6 color5 color2 color5 color

  • Experimental Results in ExicyclerTM

    SYBR Green I data

    Without reference dye

    Chart2

    41.545454545550.5454545455-72.8181818182-52.7272727273-51.5454545455-35.5454545455-15.18181818180-7.181818181856.5454545455003.5454545455000-79.636363636436.8181818182-70.4545454545-24.636363636450.545454545555.363636363641.8181818182122-21.454545454525.363636363633.8181818182126.0909090909230.818181818218.0909090909

    -35.454545454588.5454545455-9.81818181820.2727272727-61.5454545455-10.5454545455-11.181818181809.818181818265.54545454550070.5454545455000-9.6363636364-23.1818181818-25.4545454545-5.636363636430.545454545528.363636363612.818181818214-95.454545454532.3636363636-19.18181818187.0909090909126.8181818182-31.9090909091

    -10.4545454545-18.454545454520.1818181818-9.72727272738.4545454545-20.54545454559.81818181820-7.181818181820.54545454550021.54545454550006.3636363636-86.181818181813.5454545455-4.636363636418.5454545455-44.6363636364-42.18181818180-5.4545454545-31.6363636364-19.1818181818-15.9090909091201.81818181821.0909090909

    -30.454545454517.5454545455-16.81818181820.2727272727-42.545454545518.454545454528.8181818182014.818181818276.545454545500-6.4545454545000-90.6363636364-19.1818181818-14.4545454545-4.6363636364-34.454545454517.3636363636-12.181818181806.5454545455-12.63636363640.81818181828.0909090909172.8181818182-15.9090909091

    -21.4545454545-40.45454545453.1818181818-43.727272727336.454545454518.454545454592.8181818182011.8181818182-7.454545454500-6.454545454500061.3636363636-28.18181818184.5454545455-12.636363636436.5454545455-3.6363636364-19.1818181818012.5454545455-17.6363636364-11.181818181811.0909090909104.8181818182-32.9090909091

    -19.45454545457.5454545455-23.818181818237.2727272727-9.5454545455-35.545454545515.81818181820-7.1818181818-27.45454545450048.5454545455000-39.636363636430.8181818182-26.4545454545-47.636363636415.545454545524.363636363622.8181818182043.54545454552.363636363643.8181818182-31.9090909091109.81818181822.0909090909

    -14.4545454545-8.45454545452.1818181818-1.7272727273-27.545454545517.454545454524.81818181820-7.1818181818-7.454545454500-13.454545454500062.36363636363.8181818182-3.454545454545.3636363636-1.4545454545-21.6363636364-23.1818181818045.545454545538.363636363631.818181818226.090909090988.818181818240.0909090909

    24.545454545518.545454545537.1818181818-73.7272727273-5.545454545572.454545454563.818181818201.8181818182-4.45454545450021.545454545500048.36363636368.818181818231.545454545518.36363636361.5454545455-3.63636363648.8181818182016.5454545455-0.63636363647.818181818244.090909090960.818181818224.0909090909

    -19.454545454525.5454545455-11.818181818233.2727272727-34.545454545563.4545454545-39.18181818180-7.1818181818-21.45454545450054.5454545455000-41.63636363644.8181818182-43.4545454545-1.63636363642.5454545455-10.6363636364-32.1818181818022.5454545455-16.6363636364-34.1818181818-1.9090909091-8.181818181845.0909090909

    44.545454545530.54545454554.1818181818-4.7272727273-1.5454545455-32.5454545455-28.18181818180-7.1818181818-20.454545454500-18.4545454545000-4.6363636364-45.181818181821.545454545546.3636363636-38.45454545456.363636363658.81818181820-42.454545454563.363636363638.8181818182-29.9090909091-208.1818181818-88.9090909091

    -37.45454545455.5454545455-11.818181818221.27272727277.454545454514.4545454545-45.1818181818021.818181818254.545454545500-30.454545454500026.363636363645.8181818182-11.4545454545-9.63636363649.5454545455-5.636363636419.81818181820-46.4545454545-0.6363636364-17.181818181812.0909090909-205.181818181815.0909090909

    38.5454545455-33.454545454510.181818181858.272727272779.4545454545-55.5454545455-71.18181818180-7.1818181818-35.454545454500-18.4545454545000-52.636363636442.81818181822.5454545455-2.6363636364-27.4545454545-26.636363636447.81818181820-6.454545454521.36363636364.8181818182-16.9090909091-170.181818181820.0909090909

    45.5454545455-4.4545454545-12.8181818182-16.7272727273-10.5454545455-60.5454545455-52.18181818180-7.1818181818-27.454545454500-52.454545454500024.363636363641.818181818225.5454545455-26.636363636417.545454545568.3636363636-29.18181818180-46.4545454545-45.6363636364-46.1818181818-4.9090909091-147.1818181818-9.9090909091

    16.5454545455-1.454545454518.181818181828.272727272730.4545454545-7.5454545455-17.18181818180-7.1818181818-49.454545454500-60.4545454545000-35.6363636364-24.1818181818-8.45454545455.363636363611.54545454556.363636363655.818181818220-52.4545454545-15.6363636364-26.1818181818-72.9090909091-110.181818181858.0909090909

    62.545454545515.545454545528.181818181817.272727272746.454545454545.4545454545-18.18181818180-7.1818181818-35.454545454500-35.4545454545000-27.6363636364-53.181818181810.5454545455-51.636363636431.54545454556.3636363636134.8181818182020.545454545522.3636363636-10.1818181818-48.9090909091-112.181818181840.0909090909

    57.5454545455-98.454545454554.1818181818-15.727272727338.454545454516.4545454545-2.18181818180-7.1818181818-31.454545454500-27.454545454500050.3636363636-44.181818181825.5454545455-42.6363636364-16.454545454540.363636363693.81818181820-75.454545454538.3636363636-34.1818181818-26.9090909091-100.181818181839.0909090909

    79.545454545544.545454545582.1818181818-34.727272727385.4545454545-46.5454545455-25.18181818180-7.181818181813.5454545455005.545454545500056.3636363636-14.181818181893.5454545455-33.636363636447.545454545575.3636363636125.81818181820-67.454545454574.3636363636-42.1818181818-91.9090909091-103.181818181856.0909090909

    119.5454545455-89.4545454545109.1818181818-27.7272727273114.4545454545-40.5454545455-69.18181818180-7.1818181818-24.454545454500-5.454545454500027.3636363636-67.1818181818130.5454545455-36.6363636364115.5454545455119.3636363636150.81818181820-26.4545454545150.363636363612.8181818182-50.9090909091-66.1818181818134.0909090909

    271.5454545455-61.4545454545235.1818181818-9.7272727273268.4545454545-24.5454545455-49.18181818180-7.1818181818-54.454545454500-47.454545454500066.3636363636-88.1818181818290.5454545455-15.6363636364241.5454545455310.3636363636323.81818181820-18.4545454545218.3636363636-73.1818181818-17.909090909197.8181818182324.0909090909

    594.5454545455-89.4545454545463.1818181818-52.7272727273541.4545454545-37.5454545455-22.18181818180-7.1818181818-29.454545454500-28.4545454545000-20.6363636364-33.1818181818611.545454545552.3636363636496.5454545455579.3636363636546.81818181820-12.4545454545490.3636363636-50.1818181818-119.9090909091313.8181818182546.0909090909

    1055.5454545454-82.45454545451058.1818181818-19.72727272731075.4545454546-115.5454545455-77.18181818180-7.1818181818-55.454545454500-108.4545454545000-32.6363636364-71.18181818181111.5454545454-29.63636363641091.54545454541106.36363636361000.81818181820-114.4545454545953.3636363636-11.1818181818-56.9090909091879.81818181821134.0909090909

    2001.5454545454-90.45454545451943.1818181818-31.72727272732030.4545454546-80.5454545455-133.18181818180-7.1818181818-72.454545454500-91.4545454545000-37.6363636364-154.18181818182118.5454545454-2.63636363641972.54545454542106.36363636362018.81818181820-21.45454545451943.3636363636-140.181818181844.09090909091826.81818181822083.0909090909

    3634.5454545454-126.45454545453484.1818181818-30.72727272733732.4545454546-13.5454545455-29.18181818180-7.1818181818-39.454545454500-141.454545454500029.3636363636-67.18181818183873.54545454540.36363636363711.54545454543838.36363636363738.81818181820-91.45454545453483.363636363643.8181818182-63.90909090913526.81818181823938.0909090909

    5979.5454545455-50.45454545455922.1818181818-61.72727272736224.4545454545-72.5454545455-52.18181818180-7.1818181818-56.454545454500-59.454545454500031.3636363636-115.18181818186348.5454545455-44.63636363646080.54545454556463.36363636366304.81818181820-79.45454545455860.3636363636-12.1818181818-51.90909090915684.81818181826424.0909090909

    8928.5454545455-109.45454545458759.1818181818-30.72727272739337.4545454545-115.5454545455-86.18181818180-7.1818181818-82.454545454500-48.45454545450000.3636363636-46.18181818189380.5454545455-49.63636363648935.54545454559467.36363636369389.81818181820-48.45454545458721.3636363636-47.1818181818-1.90909090918543.81818181829707.0909090909

    11506.5454545455-86.454545454511543.1818181818-133.727272727312128.454545454515.4545454545-48.18181818180-7.1818181818-11.454545454500-45.454545454500077.3636363636-102.181818181812076.5454545455-59.636363636411710.545454545512405.363636363612229.81818181820-37.454545454511149.3636363636-72.1818181818-87.909090909111210.818181818212625.0909090909

    13616.5454545455-65.454545454513664.18181818183.272727272714686.4545454545-35.5454545455-23.18181818180-7.1818181818-36.454545454500-101.454545454500060.3636363636-52.181818181814345.5454545455-35.636363636413824.545454545514595.363636363614473.81818181820-63.454545454513376.3636363636-39.1818181818-116.909090909113557.818181818215222.0909090909

    15277.5454545455-122.454545454515256.1818181818-11.727272727316169.4545454545-65.5454545455-74.18181818180-7.1818181818-60.454545454500-3.454545454500091.3636363636-47.181818181815864.5454545455-24.636363636415284.545454545516254.363636363615912.81818181820-18.454545454514885.3636363636-46.1818181818-110.909090909115140.818181818217011.0909090909

    16287.5454545455-78.454545454516301.1818181818-67.727272727317044.4545454545-32.5454545455-31.1818181818028.8181818182-114.454545454500-65.454545454500057.3636363636-68.181818181816968.5454545455-36.636363636416244.545454545517201.363636363616961.8181818182015.545454545515913.3636363636-49.1818181818-84.909090909116303.818181818218030.0909090909

    16558.5454545455-174.454545454516629.1818181818-72.727272727317455.4545454545-52.5454545455-125.18181818180-7.1818181818-80.454545454500-63.454545454500018.3636363636-65.181818181817393.5454545455-11.636363636416676.545454545517723.363636363617339.81818181820-34.454545454516504.3636363636-46.1818181818-102.909090909117174.818181818218573.0909090909

    17071.5454545455-136.454545454517136.18181818187.272727272718009.4545454545-66.5454545455-107.18181818180-4.1818181818-99.454545454500-63.454545454500021.3636363636-72.181818181817868.5454545455-44.636363636417177.545454545518154.363636363617881.8181818182028.545454545517146.3636363636-60.1818181818-153.909090909117783.818181818219402.0909090909

    17102.5454545455-179.454545454517031.1818181818-59.727272727318107.4545454545-58.5454545455-23.18181818180-7.1818181818-50.454545454500-62.454545454500082.3636363636-21.181818181818031.5454545455-47.636363636417145.545454545518100.363636363618103.81818181820-116.454545454517339.3636363636-42.1818181818-125.909090909117861.818181818219506.0909090909

    17122.5454545455-127.454545454517227.1818181818-4.727272727318130.4545454545-135.5454545455-49.18181818180-4.1818181818-99.454545454500-49.4545454545000-33.6363636364-89.181818181817978.5454545455-81.636363636417229.545454545518226.363636363618058.81818181820-10.454545454517291.3636363636-87.1818181818-101.909090909118142.818181818219727.0909090909

    16994.5454545455-130.454545454517069.1818181818-12.727272727318205.4545454545-72.5454545455-86.18181818180-7.1818181818-46.454545454500-20.4545454545000-45.6363636364-67.181818181817990.5454545455-20.636363636417216.545454545518234.363636363618119.8181818182015.545454545517453.3636363636-63.1818181818-108.909090909118030.818181818219656.0909090909

    17176.5454545455-86.454545454517238.1818181818-12.727272727318269.4545454545-89.5454545455-41.18181818180-7.1818181818-73.454545454500-69.454545454500034.3636363636-76.181818181818115.5454545455-17.636363636417200.545454545518182.363636363618042.81818181820-33.454545454517429.3636363636-56.1818181818-165.909090909118099.818181818219567.0909090909

    17208.5454545455-107.454545454517191.1818181818-58.727272727318201.4545454545-128.5454545455-100.1818181818010.8181818182-50.4545454545007.545454545500072.36363636361.818181818218074.5454545455-22.636363636417256.545454545518200.363636363617935.81818181820-6.454545454517579.3636363636-27.1818181818-70.909090909118119.818181818219560.0909090909

    17387.5454545455-124.454545454517155.1818181818-60.727272727317955.4545454545-111.5454545455-46.18181818180-3.1818181818-8.454545454500-6.4545454545000-21.6363636364-49.181818181818275.5454545455-20.636363636417348.545454545518148.363636363617964.8181818182025.545454545517731.3636363636-35.1818181818-106.909090909118217.818181818219378.0909090909

    17258.5454545455-179.454545454517241.1818181818-22.727272727318296.4545454545-30.5454545455-77.18181818180-7.1818181818-96.454545454500-77.4545454545000-26.6363636364-162.181818181818308.545454545556.363636363617184.545454545518179.363636363618249.81818181820-8.454545454517745.3636363636-44.1818181818-47.909090909118116.818181818219626.0909090909

    17450.5454545455-71.454545454517015.1818181818-30.727272727318132.4545454545-63.5454545455-100.18181818180-5.1818181818-102.454545454500-25.4545454545000-39.636363636412.818181818218405.5454545455-20.636363636417229.545454545518315.363636363618102.81818181820-39.454545454517834.363636363632.81818181825.090909090918113.818181818219697.0909090909

    17258.5454545455-34.454545454517087.1818181818-69.727272727318153.4545454545-6.5454545455-133.18181818180-7.1818181818-66.454545454500-19.4545454545000-72.6363636364-44.181818181818328.5454545455-8.636363636417218.545454545518263.363636363618085.81818181820-13.454545454517787.3636363636-54.1818181818-84.909090909118086.818181818219684.0909090909

    test1

    304000000000000000000000000000000000000050000000101218000000000030000000000021000000000000992148360000000

    3010005040000000000000010000000000000089054000000000000000000000002017000000000056000000000000614260290000000

    32300082700000003000000000000000000000056000000000000000000000000022000000000005600000000000099087350000300

    31200092000000000000000000004600000000053014000000000000140000000000120000000000030000000000000840357704004300

    3910001048000000010000000040000000000000007100000000000035000000000029000000000001270000000000030136499487000017011

    3960001285000000030000000000002900000000086070000000000000400000000004900000000000910000000000024103082440012029018

    37700015200000000390000000000018000000000180590000000000000000000000040000000000051000000000000100228757053403900

    32100016180000027060000020000000000000007805000000000000050000000000044000000000008100000000000611340999408010052032

    37700017280000010820000005803000011000000000960410000000001001760000000000073000000000007800000000000459921438807420056042

    41400018930000022000010095000005300000000046063000000000800000000000005900000000000120000000000004282817115004624072036

    367000191900000000000000123000012000000000520690000000033001330000000000036000000000009500000000000441209779400008031

    3910002190000000414500000200000600000000069056000000000100000000000006400000000000910000000000043169255557000075046

    35800021860000056000000000000046000000000280210000000000003500000000003800000000200600000000000075121819113441018054053

    45600023680000000100040004000000600000000043043000000000120060000000000150000000000018400000000000811580761553100021016

    4560002326000001590900000084000003400000000010506200000000000400000000000530000000000011000000000000815325681903000071093

    4450002402000001211600000027061400110000000009606800000000015006500000000003600000000020044000000000001171406274225650120940110

    536000247200002723793530034000015000970000000001150155000000000900900000000002800000000000110000000130000841536777185939220620127

    5690002512000004198370000014303300620000000005401200000000000700000000000005600000000000132000000000001011746581841222540600216

    735000260900000231689000005002526004200000000056027300008410000143000000000000280000000000015200000000000269108295217923739290240293

    89300026269000000494890000000000000000000007205210000309277000213940380000000300570000014600000139000000000004537738771314770130480546

    13430002576495000051918580000017002500590000000005509332300083276400021930103200000000007300000000000950000000000085876186140873000180896

    2125000275612550000391695280000028000008100000000073017366000177917360005189800000000000031000000000001121000000600001671110656413717260008201712

    352900025962479000051312226006100340240003000000000010703107000033563249000634290230000000000690000000000010300000000000284172710011931420701803010

    53180002766439900005152242400000420000059000000000109051190000566055400003257840110000000000200000000000710000000000047925032613352680001305017

    75150002770684100006177121500000800000010600000000097075170000839683040004485242146000000000055000000000008800000000000713168533311077600005607342

    96990002974917900001301015331000004800330010900000000015101012770001112210823001333611064032000000000045000000000001120000000000094231454180139103190004609563

    116120002824111090000161200839003200000000950000000007901186500001315012829000013013000000000000560000000000077000000000001133113016601231210100016011373

    1293300029021242200007513236190000040000012800000000012001305227000144611416200015143523536000000000091000000000008600000000000124571083246120133627001012550

    1390000029121325900005114091000000000000620000000007101379274000152941500300046152407460000000000180000000000014727000000000013136122887312714161238039013272

    1489100029431392600001114637110000039000008300000000070014209640001590815663000581574836350000000000600000000000012400000000000136161073141581478504066013766

    15606000289414191000039148184100000580000077000000000730144947200016009158950002415919115300000000007400000000000790000000001013831130596413714999616055013903

    16063000295814433000083151300000000000001320000000001170147001100016249161020003016225033000000080058600000000001130000002407900141426638321801514998047014102

    165170003152145400000561515424000003300460058000000000960148116100016238161090005016238222900000000006400000000000480000000000014096925348791517800029014092

    1651600031101449400009315175900800330014007100000000058014767330001623916074000211620409000000000052000000000001361900000000001398313152461281519230037014135

    168260003103144730000751492530000001200000520000000001300148200000162501608200066161591759000000000073110000000000122000000000001407010777431391517702021014154

    169510003079143900000881493313000000007007100000000081014742000016185159790006516125681800000000001600000000000700000000000014010914676117151190000014065

    169380002921145290000841499410000003300000112000000000107014855400016204161120000161250000000000006000000000009000000070000139916864471271502000022014078

    1691300031561441700004014966140000070000025000000000630147150000162921623700020161150280000000150071000000000006300000000000139651050631081505100021014058

    16983000309914468000045147940000000004900820000000009101477733000161371610300019160513110000000000031000000000001230000000000013990923391133149984000013940

    169830003224145250000161488700000010000065000000000100014781000016262161910002816016369000000000056000000000001130000000000013932831674134151120008013988

    Ave

    366.09090909090001557.63636363640000019.36363636363.909090909114.5454545455000.09090909090014.272727272711.18181818183.090909090900020.090909090900000000052.9090909091046.72727272730000000031.727272727302.727272727320.7272727273000000000039.0909090909000000000.181818181800800000000000028.0909090909111.454545454529.818181818274.636363636483.36363636363.727272727323.36363636368040.7272727273024.4545454545

    -62.0909090909000-1557.636363636400000-19.3636363636-3.9090909091-14.545454545500-0.090909090900-14.2727272727-11.1818181818-3.0909090909000-20.0909090909000000000-52.90909090910-46.727272727305000000-3-0.727272727309.2727272727-2.72727272730000000000-36.090909090900000000-0.181818181800-5900000000000-28.0909090909-12.4545454545-8.8181818182-26.6363636364-47.3636363636-3.7272727273-23.3636363636-80-40.72727272730-24.4545454545

    -65.0909090909000-1053.636363636400000-19.3636363636-3.9090909091-14.545454545500-0.090909090900-14.2727272727-10.1818181818-3.0909090909000-20.090909090900000000036.090909090907.272727272700000000-3-1.72727272730-2.7272727273-20.72727272730000000000-19.0909090909170000000-0.181818181800-2400000000000-28.0909090909-50.454545454512.1818181818-14.6363636364-54.3636363636-3.7272727273-23.3636363636-80-40.72727272730-24.4545454545

    -43.0909090909000-730.636363636400000-19.3636363636-3.909090909115.454545454500-0.090909090900-14.2727272727-11.1818181818-3.0909090909000-20.09090909090000000003.09090909090-46.727272727300000000-3-1.72727272730-2.7272727273-20.72727272730000000000-17.090909090900000000-0.181818181800-2400000000000-28.0909090909-12.4545454545-29.818181818212.3636363636-48.3636363636-3.7272727273-23.3636363636-80-37.72727272730-24.4545454545

    -54.0909090909000-637.636363636400000-19.3636363636-3.9090909091-14.545454545500-0.090909090900-14.2727272727-11.1818181818-3.090909090900025.90909090910000000000.09090909090-32.727272727300000000-3-1.72727272730-2.7272727273-6.72727272730000000000-27.090909090900000000-0.181818181800-5000000000000-28.0909090909-27.4545454545-29.8181818182-39.6363636364-6.3636363636-3.7272727273-19.3636363636-802.27272727270-24.4545454545

    24.9090909091000-509.636363636400000-19.3636363636-3.9090909091-4.545454545500-0.090909090900-14.2727272727-11.18181818180.9090909091000-20.0909090909000000000-52.9090909091024.272727272700000000-3-1.72727272730-2.727272727314.27272727270000000000-10.090909090900000000-0.18181818180047000000000001.909090909124.545454545519.181818181819.36363636363.6363636364-3.7272727273-23.3636363636-80-23.72727272730-13.4545454545

    29.9090909091000-272.636363636400000-19.3636363636-3.909090909115.454545454500-0.090909090900-14.2727272727-11.1818181818-3.09090909090008.909090909100000000033.0909090909023.272727272700000000-3-1.72727272730-2.7272727273-16.727272727300000000009.909090909100000000-0.1818181818001100000000000-4.0909090909-8.4545454545-29.81818181827.3636363636-39.3636363636-3.7272727273-23.363636363640-11.72727272730-6.4545454545

    10.9090909091000-37.636363636400000-19.3636363636-3.909090909124.454545454500-0.090909090900-14.2727272727-11.1818181818-3.0909090909000-2.0909090909000000000-34.9090909091012.272727272700000000-3-1.72727272730-2.7272727273-20.72727272730000000000-35.090909090900000000-0.181818181800-2900000000000-28.0909090909-11.4545454545-7.818181818212.3636363636-26.3636363636-3.727272727329.6363636364-40-1.72727272730-24.4545454545

    -45.090909090900060.3636363636000007.6363636364-3.9090909091-8.545454545500-0.090909090900-12.2727272727-11.1818181818-3.0909090909000-20.090909090900000000025.090909090903.272727272700000000-3-1.72727272730-2.727272727329.272727272700000000004.909090909100000000-0.181818181800100000000000-22.09090909091.545454545510.181818181824.363636363610.6363636364-3.727272727356.63636363642011.272727272707.5454545455

    10.9090909091000170.36363636360000088.6363636364-1.9090909091-14.545454545500-0.09090909090043.7272727273-11.181818181826.9090909091000-9.090909090900000000043.09090909090-5.727272727300000000-38.2727272727014.272727272739.2727272727000000000033.909090909100000000-0.181818181800-20000000000016.9090909091-12.4545454545-8.8181818182-31.63636363644.6363636364-3.727272727350.636363636412015.2727272727017.5454545455

    47.9090909091000335.3636363636000002.6363636364-3.9090909091-14.5454545455000.90909090910080.7272727273-11.1818181818-3.090909090900032.9090909091000000000-6.9090909091016.272727272700000000-36.27272727270-2.7272727273-20.7272727273000000000019.909090909100000000-0.181818181800400000000000013.9090909091-29.454545454551.1818181818-3.636363636466.6363636364-3.727272727322.636363636416031.2727272727011.5454545455

    0.9090909091000361.363636363600000-19.3636363636-3.9090909091-14.545454545500-0.090909090900-14.2727272727111.8181818182-3.0909090909000-8.0909090909000000000-0.9090909091022.27272727270000000030-1.7272727273010.27272727279.27272727270000000000-3.090909090900000000-0.181818181800150000000000015.90909090918.5454545455-20.81818181822.363636363610.6363636364-3.7272727273-23.3636363636-80-32.727272727306.5454545455

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    4951.90909090910001208.36363636364399000031.63636363645220.09090909099.454545454500-0.09090909090027.7272727273-11.1818181818-3.090909090900038.909090909100000000056.090909090905072.272727272700005660554000-330.27272727275784-2.7272727273-9.72727272730000000000-37.090909090900000000-0.181818181800-9000000000004763.9090909091-61.45454545452.1818181818-68.636363636449.63636363645264.2727272727-23.3636363636-80-27.727272727304992.5454545455

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    13533.90909090910001354.363636363613259000031.636363636414087.0909090909-14.545454545500-0.090909090900-14.2727272727-11.1818181818-3.090909090900041.909090909100000000018.0909090909013745.272727272774000152941500300-344.2727272727152404.272727272725.27272727270000000000-21.090909090900000000-0.1818181818006727000000000013107.909090909110.545454545558.1818181818-1.636363636443.636363636414157.2727272727-0.363636363600-1.7272727273013247.5454545455

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    16616.90909090910001541.363636363614468000025.636363636414790.0909090909-14.545454545500-0.090909090900-14.2727272727-11.1818181818-3.0909090909490061.909090909100000000038.0909090909014730.272727272733000161371610300-317.27272727271605128.2727272727-10.72727272730000000000-8.090909090900000000-0.181818181800430000000000013961.9090909091-19.45454545453.181818181816.363636363649.636363636414994.2727272727-19.3636363636-80-40.7272727273013915.5454545455

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    test1

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    Test1

    Test3

    11296000000007250224121133108142012361014525830210909101041255985143811761945039730006726187018817055643801236841191401131081842101290242314211201371749715411951475429127991122031522061915312920101261378780000245

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    Ave

    171.5454545455169.363636363600000000221.54545454550290.3636363636154.0909090909191.8181818182171.7272727273104.72727272730106.9090909091129.81818181823.6363636364156.0909090909336.0909090909323.1818181818152.0909090909112.6363636364113.72727272737161.0909090909112.636363636499.0909090909107.5454545455146.5454545455134.7272727273200.4545454545337.8181818182125.6363636364120.90909090915618.8181818182018.7272727273105.2727272727181496.5454545455234.9090909091221.8181818182136.272727272721.545454545560.181818181817.363636363689.90909090919710.0909090909120.6363636364229.6363636364129.6363636364153.8181818182218.3636363636224124.1818181818994.909090909160.4545454545113.36363636361050.8181818182151.1818181818187.1818181818156.2727272727189.9090909091155.454545454578.727272727353.2727272727121.545454545582.1818181818145.7272727273136.8181818182150.2727272727189.1818181818211.2727272727213.6363636364243.363636363679.818181818296.2727272727141.09090909090165.6363636364194.6363636364122.90909090910000274.5454545455

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    -31.545454545548.636363636400000000-71.54545454550-23.3636363636-71.0909090909-41.8181818182-64.7272727273-53.72727272730-57.9090909091-30.8181818182-3.6363636364-1.0909090909-54.0909090909-8.1818181818-21.09090909094.3636363636-31.7272727273-16-53.09090909095.3636363636-37.0909090909-58.5454545455-8.54545454553.2727272727-97.4545454545-58.8181818182-73.6363636364-84.9090909091-36-18.81818181820-18.7272727273-81.27272727272152-6.5454545455-103.9090909091-51.8181818182-48.2727272727-21.54545454554.8181818182-17.3636363636-33.9090909091-12-10.0909090909-13.6363636364-56.6363636364-1.6363636364-3.8181818182-93.3636363636-46-31.1818181818-9-25.9090909091-50.4545454545-19.3636363636-21-0.8181818182-39.1818181818-36.18181818182.7272727273-48.9090909091-94.4545454545-33.7272727273-5.2727272727-41.5454545455-3.1818181818-36.7272727273-35.8181818182-9.2727272727-51.1818181818-15.2727272727-39.6363636364-62.3636363636-18.8181818182-23.2727272727-25.09090909090-76.6363636364-39.6363636364-59.90909090910000-92.5454545455

    -49.54545454552.636363636400000000-28.54545454550-38.36363636360.9090909091-61.8181818182-22.72727272730.2727272727029.0909090909-92.8181818182-3.6363636364-54.0909090909-27.0909090909-28.1818181818-68.0909090909-8.6363636364-28.7272727273-1748.90909090912.3636363636-47.0909090909-5.5454545455-23.545454545524.2727272727-42.4545454545-57.8181818182-41.6363636364-30.90909090916-18.81818181820-9.72727272737.7272727273-18-33-6.5454545455-5.9090909091-9.8181818182-32.27272727271.4545454545-43.1818181818-16.36363636369.0909090909-29-10.0909090909-19.63636363640.363636363643.3636363636-58.8181818182-16.3636363636-21-16.1818181818-914.0909090909-46.4545454545-4.363636363611-0.81818181829.818181818233.818181818249.727272727334.0909090909-9.454545454530.27272727279.7272727273-36.5454545455-25.181818181821.272727272721.1818181818-73.2727272727-4.1818181818-51.272727272752.3636363636-53.3636363636-25.8181818182-2.272727272728.90909090910-31.6363636364-41.6363636364-61.90909090910000-39.5454545455

    -18.5454545455-5.363636363600000000-27.54545454550-0.3636363636-14.090909090916.1818181818-15.727272727316.27272727270-12.9090909091-13.8181818182-3.6363636364-9.0909090909-0.0909090909-47.1818181818-40.0909090909-2.6363636364-28.7272727273-7138.9090909091-4.6363636364-11.0909090909-2.5454545455-65.54545454554.272727272730.5454545455-138.81818181824.3636363636-4.9090909091-21-18.818181818200.2727272727-40.2727272727-1849-6.545454545510.090909090926.1818181818-46.2727272727-1.5454545455-17.1818181818-17.3636363636-4.909090909115-10.0909090909-19.6363636364-31.6363636364-86.6363636364-34.8181818182-42.3636363636-26-12.1818181818-9-18.9090909091-59.4545454545-21.363636363664-0.8181818182-89.18181818181.8181818182-0.2727272727-10.9090909091-2.4545454545-40.7272727273-18.2727272727-34.54545454553.8181818182-63.72727272735.1818181818-3.272727272710.8181818182-18.2727272727-43.63636363641.63636363645.1818181818-13.272727272711.90909090910-43.6363636364-10.6363636364-61.9090909091000026.4545454545

    46.4545454545-10.363636363600000000-2.5454545455021.636363636410.909090909138.18181818183.2727272727-44.72727272730-21.909090909145.1818181818-3.6363636364-9.0909090909-12.0909090909-35.181818181837.909090909143.3636363636-29.7272727273-5421.90909090913.363636363634.9090909091-21.5454545455-35.545454545558.2727272727-3.454545454533.181818181810.3636363636-0.9090909091-18-18.81818181820-9.727272727347.7272727273162-6.545454545516.090909090929.181818181834.727272727328.4545454545-14.1818181818-17.36363636367.0909090909-15-10.0909090909-15.6363636364-65.636363636421.3636363636-30.8181818182-45.36363636364124.8181818182-9-23.909090909122.5454545455-40.3636363636-53-0.8181818182-43.181818181824.8181818182-16.2727272727-18.9090909091-8.4545454545-14.727272727322.7272727273-22.5454545455-2.181818181821.2727272727-27.818181818229.7272727273-10.1818181818-51.272727272742.363636363631.6363636364-4.81818181829.72727272732.90909090910-16.636363636412.363636363630.0909090909000035.4545454545

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