dmitry schigel – open biodiversity information: international perspectives
TRANSCRIPT
Open biodiversity information international perspectives
SUOMEN LAJITIETOKESKUS - SEMINAARI ELIOumlLAJITIEDON MERKITYKSESTAuml HELSINKI 22 MAY 2015
Dmitry Schigel Programme Officer for Content Analysis and Use
GBIF Secretariat
bull Global biodiversity data bull GBIF network bull Finland and biodiversity data
OUTLINE
Banksia serrata Lf
Kingdom Plantae Division Magnoliophyta Family Proteaceae Subfamily Grevil leoideae Tribe Banksieae Subtribe Banksiinae Genus Banksia Lf
Old Man Banksia
= Isostylis serrata (Lf) Britten
Named
Root rot Phytophthora cinnamomi
Pathogen of
Banksia jewel beetle Cyrioides imperialis
Larvae mine s tems
Banksia serrata woodland
Acacia terminalis Allocasuarina monilifera Banksia serrata Dil lwynia glaberrima Epacris impressa Leptospermum glaucescens Leptospermum scoparium Leucopogon coll inus Monotoca glauca Philotheca virgata Pimelea humilis
Community member
Biology and ecology
Molecular biology
Dis tribution Li terature
= Sirmuellera serrata (Lf) Kuntze
Saw Banksia
BIODIVERSITY DATA
Sources of biodiversity data Collections field observations monitoring activities genomics citizen science remote sensing expert
knowledge historical literature
Uses of biodiversity data Taxonomy conservation biosecurity land-use planning climate change response crop development
resource management materials development forensics hellip
SOURCES AND USES
httpbiodiversityinformaticsorg httpcatalogueoflifeorg httpbiodiversityl ibraryorg httpboldsystemsorg httpeolorg
DIGITAL BIODIVERSITY KNOWLEDGE
DATA
SC
IEN
CE
POLI
CY
Science-Policy Interface IPBES
IUCN UNEP-WCMC Future Earth
GBIF TraitBank INSDC Catalogue
of Life
Citizen Science
Natural History
Collections Field
Surveys Laboratory
Data Remote Sensing Literature
National Governments
Strategic Plan for Biodiversity Aichi Targets
CBD FAO CMS CITES RAMSAR
Data catalogues
Coordinated analyses
Source data
Data-Science Interface GEO BON Map of Life
Expert assessments
Scientific research
Modeled variables
Commitments
Ecological Research
Taxonomic Research
Conservation Research
Agricultural Research
Human Health
Climate Change
Implementation amp monitoring
BIODIVERSITY EVIDENCE AND POLICY
httpwwwgbiforgwhoweworkwith
GBIF NETWORK PARTNERSHIPS AND AFFILIATIONS
GBIF
TYPES OF DATA SHARED THROUGH GBIF
Observations from field surveys
inventories and citizen scientists
Records extracted from literature
Specimens from museum and
herbarium collections
NEW Research projects surveys expeditions
sample-based data
GBIF BY THE NUMBERS 533667297
species occurrence records
14123 datasets
663 data-publishing
institutions
bull httpwwwgbiforg | 06 MAY 2015
Data published through GBIforg
httpwwwgbiforg | 6 MAY 2015
Trend in primary biodiversity records (millions)
100
150
200
250
300
350
400
450
500
550
600
Data publishers
A sharp rise in the number of data publishers in September 2013 results from institutions choosing to register as separate entities rather than sharing datasets through a single publisher at their national node institution httpwwwgbiforg | 06 MAY 2015
Trend in number of institutions registered as GBIF data publishers
200
250
300
350
400
450
500
550
600
650
700
Visits to GBIForg by Country
Google Analytics report for GBIForg April statistics skewed by errors introduced in late April and resolved in early May Access available upon request from commsgbiforg | 04 MAY 2015
1 United States 118049 6 France 5715
2 China 8083 7 United Kingdom 4984
3 Spain 6388 8 Brazil 4823
4 India 6321 9 Mexico 4577
5 Germany 6075 10 Colombia 3620
Apr 2015
Data download requests by country
Requests for download do not necessarily result in data actually being downloaded Based on country indicated by user login | 06 MAY 2015
1 Mexico 5838 6 Spain 2061
2 United States 4813 7 United Kingdom 1615
3 China 3359 8 Ecuador 1578
4 Denmark 3000 9 Colombia 1143
5 Brazil 2098 10 Germany 895
Total of
33144 requests from 3886 users in
120 countries islands and territories
1 Jan 2015 ndash 30 Apr 2015
Citations in peer-reviewed research
04 MAY 2015
Annual number of peer-reviewed publications using GBIF-mediated data
52
89
148
169
229
249
357
116
0
50
100
150
200
250
300
350
400
2008 2009 2010 2011 2012 2013 2014 2015 (Jan-Apr)
Research examples
bull Brown KA Parks KE Bethell CA et al Predicting plant diversity patterns in Madagascar understanding the effects of climate and land cover change in a biodiversity hotspot
bull Khoury CK Heider B Castantildeeda-Alvarez NP et al Distributions ex situ conservation priorities and genetic resource potential of crop wild relatives of sweet potato [Ipomoea batatas (L) Lam I series Batatas] Plant Science
bull Leach K Kelly R Cameron A Montgomery WI amp Reid N Expertly validated models and phylogenetically-controlled analysis suggests responses to climate change are related to species traits in the order Lagomorpha PLoS ONE
bull Shabani F Kumar L Nojoumian AH et al Projected future distribution of date palm and its potential use in alleviating micronutrient deficiency J Sci Food Agric
A complete archive of research citing used of GBIF can be accessed at httpwwwmendeleycomgroups1068301gbif-public-library 06 MAY 2015
Apr 2015
GBIF and Digital Object Identifiers
DOI ndash Digital Object Identifier bull Persistent resolvable identifiers bull Standard for published papers bull Simplify citing references bull Used in measuring impact
User searches for data through
GBIForg
DataCite Denmark
GBIForg GBIF assigns DOIs to
data downloads
Cleaned data
Data
Data attribution
Dataset DOI
Researcher
Paper
Paper DOI
User deposits cleaned dataset in a repository and gets
DOI for dataset
Published paper can give
resolvable links to GBIF
download andor to
cleaned dataset
User cleans data
User publishes
paper
GBIF download
Data
Data attribution
Download DOI
Download history
Download 1
GBIForg creates a download data set
GBIF AND DIGITAL OBJECT IDENTIFIERS
Researcher
GBIForg
Download history
Download 1
Cleaned data
Data
Data attribution
Dataset DOI
Paper
Paper DOI
GBIF download
Data
Data attribution
Download DOI
Data Publisher
Reader
GBIF
bull Cite data sources bull Linked results to data bull Suggest data
corrections
bull Discover data usage bull Receive suggested
data corrections
bull Monitor data usage bull Enhance fitness-for-
use
bull Retrieve source data bull Reproduce results
GBIF AND DIGITAL OBJECT IDENTIFIERS
GBIF AND DIGITAL OBJECT IDENTIFIERS
httpwwwgbiforgdataset7e380070-f762-11e1-a439-00145eb45e9a
GBIF AND DIGITAL OBJECT IDENTIFIERS
httpwwwgbiforgdataset7e380070-f762-11e1-a439-00145eb45e9a
PUBLISHING DATA FROM RESEARCH
PUBLISHING DATA FROM RESEARCH
httpwwwgbiforgdataset4bde5856-6d9f-41cd-880a-2d64eac05b0d
wwwpnasorgcgidoi101073pnas1308933111
mdash Agricultural biodiversity Chair Elizabeth Arnaud Bioversity International
mdash Distribution modelling Chair Jorge Soberon University of Kansas
Next steps
bull Task group to consult with professional communities and prepare initial recommendations by GB22
bull Continue collaboration with University of Satildeo Paulo Brazil to develop user-based fitness-for-use lsquoprofilesrsquo for GBIForg
bull Future task groups on marine amp invasive species research
ENHANCING DATA FITNESS FOR USE bull 2015-16 objective Enhance fitness of data accessed via GBIForg for key
research uses through engaging expert communities and identify gaps
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
Datamdashby GBIF participant
NOTE Datasets are assigned to countries according to the location of the publishing institution including aggregated datasets with contributors from many other countries httpwwwgbiforg | 06 MAY 2015
1 United States 2433348 6 Finland 1162279
2 United Kingdom 2366907 7 Belgium 707414
3 Australia 2260641 8 Netherlands 628524
4 Sweden 2146770 9 Norway 252036
5 Denmark 1187322 10 Brazil 110487
1 United States 209481914 6 Finland 19626137
2 Sweden 50995697 7 Germany 18792652
3 United Kingdom 49538295 8 France 17549337
4 Australia 36989101 9 Norway 17425011
5 Netherlands 21577009 10 Denmark 10238708
Number of new records publishedmdashTop 10 participant Countries (1 Jan to 30 Apr 2015)
Total number of records publishedmdashTop 10 Participant Countries (as of 30 Apr 2015)
httpwwwgbiforgnewsroomconsultationsstrategicplan
GBIF STRATEGIC PLAN 2017-2021
KIITOS PALJON
To monitor biodiversity trends we need more than just presence data
Concern ndash Prescence-only data
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-06 12 individuals 1 km Butterfly transect
Vanessa cardui PlotB-2014-06 8 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-06 3 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Vanessa cardui PlotA-2014-06 6 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-06 4 individuals 1 km Butterfly transect
Inachis io PlotA-2014-06 1 individual 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-07 15 individuals 1 km Butterfly transect
Vanessa cardui PlotB-2014-07 4 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-07 1 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-08 8 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-08 2 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Platichthys flesus DiveX-20120301 3 individuals 500 m2 Fish dive survey
Sprattus sprattus DiveX-20120301 71 individuals 500 m2 Fish dive survey
Species Event Quantity Sample size Protocol
Vanessa cardui PlotA-2014-07 3 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-07 8 individuals 1 km Butterfly transect
Thecla betulae PlotA-2014-07 2 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotA-2014-08 1 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-08 3 individuals 1 km Butterfly transect
Comparable
Not comparable
EXTENDING GBIF FOR SAMPLE-BASED DATA
SAMPLE-BASED DATA
httpwwwgbiforgpage82105
SAMPLE-BASED DATA
httpeubon-iptgbiforgresourcedor=butterflies-monitoring-scheme-il
Taxon Concept Institution Collection
Taxon Name
Publication
Species Occurrence
Sequence
GBIF Data Index
Catalogue of Life
Conceptual biodiversity data model
Published data sets
Institution Catalogue
Collection Catalogue
Taxon Concept Catalogue
Taxon Name Catalogue
Publication Catalogue
Species Occurrence Catalogue
Sequence Catalogue Comprehensive
service-centred catalogues
Species occurrence record includes scientific name and no explicit species concept
GBIF in future should use services from a shared catalogue to get the best concept (and to add it if not already included)
Catalogues with compatible services form an ecosystem to organise access to distributed biodiversity information
Catalogues are also best place of offer tools and services to support and organise annotations and corrections
GBIF AND GLOBALLY CONNECTED DATA
- Open biodiversity information international perspectives
- Slide Number 2
- Slide Number 3
- Slide Number 4
- Slide Number 5
- Slide Number 6
- Slide Number 7
- Slide Number 8
- Types of data shared through GBIF
- GBIF BY THE NUMBERS
- Data published through GBIforg
- Data publishers
- Visits to GBIForg by Country
- Data download requests by country
- Citations in peer-reviewed research
- Research examples
- GBIF and Digital Object Identifiers
- Slide Number 18
- Slide Number 19
- GBIF and digital object identifiers
- GBIF and digital object identifiers
- Publishing data from research
- Publishing data from research
- Slide Number 24
- Slide Number 25
- Slide Number 26
- Slide Number 27
- Slide Number 28
- Datamdashby GBIF participant
- Slide Number 30
- Slide Number 31
- Concern ndash Prescence-only data
- Slide Number 33
- sample-based data
- sample-based data
- Slide Number 36
-
bull Global biodiversity data bull GBIF network bull Finland and biodiversity data
OUTLINE
Banksia serrata Lf
Kingdom Plantae Division Magnoliophyta Family Proteaceae Subfamily Grevil leoideae Tribe Banksieae Subtribe Banksiinae Genus Banksia Lf
Old Man Banksia
= Isostylis serrata (Lf) Britten
Named
Root rot Phytophthora cinnamomi
Pathogen of
Banksia jewel beetle Cyrioides imperialis
Larvae mine s tems
Banksia serrata woodland
Acacia terminalis Allocasuarina monilifera Banksia serrata Dil lwynia glaberrima Epacris impressa Leptospermum glaucescens Leptospermum scoparium Leucopogon coll inus Monotoca glauca Philotheca virgata Pimelea humilis
Community member
Biology and ecology
Molecular biology
Dis tribution Li terature
= Sirmuellera serrata (Lf) Kuntze
Saw Banksia
BIODIVERSITY DATA
Sources of biodiversity data Collections field observations monitoring activities genomics citizen science remote sensing expert
knowledge historical literature
Uses of biodiversity data Taxonomy conservation biosecurity land-use planning climate change response crop development
resource management materials development forensics hellip
SOURCES AND USES
httpbiodiversityinformaticsorg httpcatalogueoflifeorg httpbiodiversityl ibraryorg httpboldsystemsorg httpeolorg
DIGITAL BIODIVERSITY KNOWLEDGE
DATA
SC
IEN
CE
POLI
CY
Science-Policy Interface IPBES
IUCN UNEP-WCMC Future Earth
GBIF TraitBank INSDC Catalogue
of Life
Citizen Science
Natural History
Collections Field
Surveys Laboratory
Data Remote Sensing Literature
National Governments
Strategic Plan for Biodiversity Aichi Targets
CBD FAO CMS CITES RAMSAR
Data catalogues
Coordinated analyses
Source data
Data-Science Interface GEO BON Map of Life
Expert assessments
Scientific research
Modeled variables
Commitments
Ecological Research
Taxonomic Research
Conservation Research
Agricultural Research
Human Health
Climate Change
Implementation amp monitoring
BIODIVERSITY EVIDENCE AND POLICY
httpwwwgbiforgwhoweworkwith
GBIF NETWORK PARTNERSHIPS AND AFFILIATIONS
GBIF
TYPES OF DATA SHARED THROUGH GBIF
Observations from field surveys
inventories and citizen scientists
Records extracted from literature
Specimens from museum and
herbarium collections
NEW Research projects surveys expeditions
sample-based data
GBIF BY THE NUMBERS 533667297
species occurrence records
14123 datasets
663 data-publishing
institutions
bull httpwwwgbiforg | 06 MAY 2015
Data published through GBIforg
httpwwwgbiforg | 6 MAY 2015
Trend in primary biodiversity records (millions)
100
150
200
250
300
350
400
450
500
550
600
Data publishers
A sharp rise in the number of data publishers in September 2013 results from institutions choosing to register as separate entities rather than sharing datasets through a single publisher at their national node institution httpwwwgbiforg | 06 MAY 2015
Trend in number of institutions registered as GBIF data publishers
200
250
300
350
400
450
500
550
600
650
700
Visits to GBIForg by Country
Google Analytics report for GBIForg April statistics skewed by errors introduced in late April and resolved in early May Access available upon request from commsgbiforg | 04 MAY 2015
1 United States 118049 6 France 5715
2 China 8083 7 United Kingdom 4984
3 Spain 6388 8 Brazil 4823
4 India 6321 9 Mexico 4577
5 Germany 6075 10 Colombia 3620
Apr 2015
Data download requests by country
Requests for download do not necessarily result in data actually being downloaded Based on country indicated by user login | 06 MAY 2015
1 Mexico 5838 6 Spain 2061
2 United States 4813 7 United Kingdom 1615
3 China 3359 8 Ecuador 1578
4 Denmark 3000 9 Colombia 1143
5 Brazil 2098 10 Germany 895
Total of
33144 requests from 3886 users in
120 countries islands and territories
1 Jan 2015 ndash 30 Apr 2015
Citations in peer-reviewed research
04 MAY 2015
Annual number of peer-reviewed publications using GBIF-mediated data
52
89
148
169
229
249
357
116
0
50
100
150
200
250
300
350
400
2008 2009 2010 2011 2012 2013 2014 2015 (Jan-Apr)
Research examples
bull Brown KA Parks KE Bethell CA et al Predicting plant diversity patterns in Madagascar understanding the effects of climate and land cover change in a biodiversity hotspot
bull Khoury CK Heider B Castantildeeda-Alvarez NP et al Distributions ex situ conservation priorities and genetic resource potential of crop wild relatives of sweet potato [Ipomoea batatas (L) Lam I series Batatas] Plant Science
bull Leach K Kelly R Cameron A Montgomery WI amp Reid N Expertly validated models and phylogenetically-controlled analysis suggests responses to climate change are related to species traits in the order Lagomorpha PLoS ONE
bull Shabani F Kumar L Nojoumian AH et al Projected future distribution of date palm and its potential use in alleviating micronutrient deficiency J Sci Food Agric
A complete archive of research citing used of GBIF can be accessed at httpwwwmendeleycomgroups1068301gbif-public-library 06 MAY 2015
Apr 2015
GBIF and Digital Object Identifiers
DOI ndash Digital Object Identifier bull Persistent resolvable identifiers bull Standard for published papers bull Simplify citing references bull Used in measuring impact
User searches for data through
GBIForg
DataCite Denmark
GBIForg GBIF assigns DOIs to
data downloads
Cleaned data
Data
Data attribution
Dataset DOI
Researcher
Paper
Paper DOI
User deposits cleaned dataset in a repository and gets
DOI for dataset
Published paper can give
resolvable links to GBIF
download andor to
cleaned dataset
User cleans data
User publishes
paper
GBIF download
Data
Data attribution
Download DOI
Download history
Download 1
GBIForg creates a download data set
GBIF AND DIGITAL OBJECT IDENTIFIERS
Researcher
GBIForg
Download history
Download 1
Cleaned data
Data
Data attribution
Dataset DOI
Paper
Paper DOI
GBIF download
Data
Data attribution
Download DOI
Data Publisher
Reader
GBIF
bull Cite data sources bull Linked results to data bull Suggest data
corrections
bull Discover data usage bull Receive suggested
data corrections
bull Monitor data usage bull Enhance fitness-for-
use
bull Retrieve source data bull Reproduce results
GBIF AND DIGITAL OBJECT IDENTIFIERS
GBIF AND DIGITAL OBJECT IDENTIFIERS
httpwwwgbiforgdataset7e380070-f762-11e1-a439-00145eb45e9a
GBIF AND DIGITAL OBJECT IDENTIFIERS
httpwwwgbiforgdataset7e380070-f762-11e1-a439-00145eb45e9a
PUBLISHING DATA FROM RESEARCH
PUBLISHING DATA FROM RESEARCH
httpwwwgbiforgdataset4bde5856-6d9f-41cd-880a-2d64eac05b0d
wwwpnasorgcgidoi101073pnas1308933111
mdash Agricultural biodiversity Chair Elizabeth Arnaud Bioversity International
mdash Distribution modelling Chair Jorge Soberon University of Kansas
Next steps
bull Task group to consult with professional communities and prepare initial recommendations by GB22
bull Continue collaboration with University of Satildeo Paulo Brazil to develop user-based fitness-for-use lsquoprofilesrsquo for GBIForg
bull Future task groups on marine amp invasive species research
ENHANCING DATA FITNESS FOR USE bull 2015-16 objective Enhance fitness of data accessed via GBIForg for key
research uses through engaging expert communities and identify gaps
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
Datamdashby GBIF participant
NOTE Datasets are assigned to countries according to the location of the publishing institution including aggregated datasets with contributors from many other countries httpwwwgbiforg | 06 MAY 2015
1 United States 2433348 6 Finland 1162279
2 United Kingdom 2366907 7 Belgium 707414
3 Australia 2260641 8 Netherlands 628524
4 Sweden 2146770 9 Norway 252036
5 Denmark 1187322 10 Brazil 110487
1 United States 209481914 6 Finland 19626137
2 Sweden 50995697 7 Germany 18792652
3 United Kingdom 49538295 8 France 17549337
4 Australia 36989101 9 Norway 17425011
5 Netherlands 21577009 10 Denmark 10238708
Number of new records publishedmdashTop 10 participant Countries (1 Jan to 30 Apr 2015)
Total number of records publishedmdashTop 10 Participant Countries (as of 30 Apr 2015)
httpwwwgbiforgnewsroomconsultationsstrategicplan
GBIF STRATEGIC PLAN 2017-2021
KIITOS PALJON
To monitor biodiversity trends we need more than just presence data
Concern ndash Prescence-only data
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-06 12 individuals 1 km Butterfly transect
Vanessa cardui PlotB-2014-06 8 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-06 3 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Vanessa cardui PlotA-2014-06 6 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-06 4 individuals 1 km Butterfly transect
Inachis io PlotA-2014-06 1 individual 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-07 15 individuals 1 km Butterfly transect
Vanessa cardui PlotB-2014-07 4 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-07 1 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-08 8 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-08 2 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Platichthys flesus DiveX-20120301 3 individuals 500 m2 Fish dive survey
Sprattus sprattus DiveX-20120301 71 individuals 500 m2 Fish dive survey
Species Event Quantity Sample size Protocol
Vanessa cardui PlotA-2014-07 3 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-07 8 individuals 1 km Butterfly transect
Thecla betulae PlotA-2014-07 2 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotA-2014-08 1 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-08 3 individuals 1 km Butterfly transect
Comparable
Not comparable
EXTENDING GBIF FOR SAMPLE-BASED DATA
SAMPLE-BASED DATA
httpwwwgbiforgpage82105
SAMPLE-BASED DATA
httpeubon-iptgbiforgresourcedor=butterflies-monitoring-scheme-il
Taxon Concept Institution Collection
Taxon Name
Publication
Species Occurrence
Sequence
GBIF Data Index
Catalogue of Life
Conceptual biodiversity data model
Published data sets
Institution Catalogue
Collection Catalogue
Taxon Concept Catalogue
Taxon Name Catalogue
Publication Catalogue
Species Occurrence Catalogue
Sequence Catalogue Comprehensive
service-centred catalogues
Species occurrence record includes scientific name and no explicit species concept
GBIF in future should use services from a shared catalogue to get the best concept (and to add it if not already included)
Catalogues with compatible services form an ecosystem to organise access to distributed biodiversity information
Catalogues are also best place of offer tools and services to support and organise annotations and corrections
GBIF AND GLOBALLY CONNECTED DATA
- Open biodiversity information international perspectives
- Slide Number 2
- Slide Number 3
- Slide Number 4
- Slide Number 5
- Slide Number 6
- Slide Number 7
- Slide Number 8
- Types of data shared through GBIF
- GBIF BY THE NUMBERS
- Data published through GBIforg
- Data publishers
- Visits to GBIForg by Country
- Data download requests by country
- Citations in peer-reviewed research
- Research examples
- GBIF and Digital Object Identifiers
- Slide Number 18
- Slide Number 19
- GBIF and digital object identifiers
- GBIF and digital object identifiers
- Publishing data from research
- Publishing data from research
- Slide Number 24
- Slide Number 25
- Slide Number 26
- Slide Number 27
- Slide Number 28
- Datamdashby GBIF participant
- Slide Number 30
- Slide Number 31
- Concern ndash Prescence-only data
- Slide Number 33
- sample-based data
- sample-based data
- Slide Number 36
-
Banksia serrata Lf
Kingdom Plantae Division Magnoliophyta Family Proteaceae Subfamily Grevil leoideae Tribe Banksieae Subtribe Banksiinae Genus Banksia Lf
Old Man Banksia
= Isostylis serrata (Lf) Britten
Named
Root rot Phytophthora cinnamomi
Pathogen of
Banksia jewel beetle Cyrioides imperialis
Larvae mine s tems
Banksia serrata woodland
Acacia terminalis Allocasuarina monilifera Banksia serrata Dil lwynia glaberrima Epacris impressa Leptospermum glaucescens Leptospermum scoparium Leucopogon coll inus Monotoca glauca Philotheca virgata Pimelea humilis
Community member
Biology and ecology
Molecular biology
Dis tribution Li terature
= Sirmuellera serrata (Lf) Kuntze
Saw Banksia
BIODIVERSITY DATA
Sources of biodiversity data Collections field observations monitoring activities genomics citizen science remote sensing expert
knowledge historical literature
Uses of biodiversity data Taxonomy conservation biosecurity land-use planning climate change response crop development
resource management materials development forensics hellip
SOURCES AND USES
httpbiodiversityinformaticsorg httpcatalogueoflifeorg httpbiodiversityl ibraryorg httpboldsystemsorg httpeolorg
DIGITAL BIODIVERSITY KNOWLEDGE
DATA
SC
IEN
CE
POLI
CY
Science-Policy Interface IPBES
IUCN UNEP-WCMC Future Earth
GBIF TraitBank INSDC Catalogue
of Life
Citizen Science
Natural History
Collections Field
Surveys Laboratory
Data Remote Sensing Literature
National Governments
Strategic Plan for Biodiversity Aichi Targets
CBD FAO CMS CITES RAMSAR
Data catalogues
Coordinated analyses
Source data
Data-Science Interface GEO BON Map of Life
Expert assessments
Scientific research
Modeled variables
Commitments
Ecological Research
Taxonomic Research
Conservation Research
Agricultural Research
Human Health
Climate Change
Implementation amp monitoring
BIODIVERSITY EVIDENCE AND POLICY
httpwwwgbiforgwhoweworkwith
GBIF NETWORK PARTNERSHIPS AND AFFILIATIONS
GBIF
TYPES OF DATA SHARED THROUGH GBIF
Observations from field surveys
inventories and citizen scientists
Records extracted from literature
Specimens from museum and
herbarium collections
NEW Research projects surveys expeditions
sample-based data
GBIF BY THE NUMBERS 533667297
species occurrence records
14123 datasets
663 data-publishing
institutions
bull httpwwwgbiforg | 06 MAY 2015
Data published through GBIforg
httpwwwgbiforg | 6 MAY 2015
Trend in primary biodiversity records (millions)
100
150
200
250
300
350
400
450
500
550
600
Data publishers
A sharp rise in the number of data publishers in September 2013 results from institutions choosing to register as separate entities rather than sharing datasets through a single publisher at their national node institution httpwwwgbiforg | 06 MAY 2015
Trend in number of institutions registered as GBIF data publishers
200
250
300
350
400
450
500
550
600
650
700
Visits to GBIForg by Country
Google Analytics report for GBIForg April statistics skewed by errors introduced in late April and resolved in early May Access available upon request from commsgbiforg | 04 MAY 2015
1 United States 118049 6 France 5715
2 China 8083 7 United Kingdom 4984
3 Spain 6388 8 Brazil 4823
4 India 6321 9 Mexico 4577
5 Germany 6075 10 Colombia 3620
Apr 2015
Data download requests by country
Requests for download do not necessarily result in data actually being downloaded Based on country indicated by user login | 06 MAY 2015
1 Mexico 5838 6 Spain 2061
2 United States 4813 7 United Kingdom 1615
3 China 3359 8 Ecuador 1578
4 Denmark 3000 9 Colombia 1143
5 Brazil 2098 10 Germany 895
Total of
33144 requests from 3886 users in
120 countries islands and territories
1 Jan 2015 ndash 30 Apr 2015
Citations in peer-reviewed research
04 MAY 2015
Annual number of peer-reviewed publications using GBIF-mediated data
52
89
148
169
229
249
357
116
0
50
100
150
200
250
300
350
400
2008 2009 2010 2011 2012 2013 2014 2015 (Jan-Apr)
Research examples
bull Brown KA Parks KE Bethell CA et al Predicting plant diversity patterns in Madagascar understanding the effects of climate and land cover change in a biodiversity hotspot
bull Khoury CK Heider B Castantildeeda-Alvarez NP et al Distributions ex situ conservation priorities and genetic resource potential of crop wild relatives of sweet potato [Ipomoea batatas (L) Lam I series Batatas] Plant Science
bull Leach K Kelly R Cameron A Montgomery WI amp Reid N Expertly validated models and phylogenetically-controlled analysis suggests responses to climate change are related to species traits in the order Lagomorpha PLoS ONE
bull Shabani F Kumar L Nojoumian AH et al Projected future distribution of date palm and its potential use in alleviating micronutrient deficiency J Sci Food Agric
A complete archive of research citing used of GBIF can be accessed at httpwwwmendeleycomgroups1068301gbif-public-library 06 MAY 2015
Apr 2015
GBIF and Digital Object Identifiers
DOI ndash Digital Object Identifier bull Persistent resolvable identifiers bull Standard for published papers bull Simplify citing references bull Used in measuring impact
User searches for data through
GBIForg
DataCite Denmark
GBIForg GBIF assigns DOIs to
data downloads
Cleaned data
Data
Data attribution
Dataset DOI
Researcher
Paper
Paper DOI
User deposits cleaned dataset in a repository and gets
DOI for dataset
Published paper can give
resolvable links to GBIF
download andor to
cleaned dataset
User cleans data
User publishes
paper
GBIF download
Data
Data attribution
Download DOI
Download history
Download 1
GBIForg creates a download data set
GBIF AND DIGITAL OBJECT IDENTIFIERS
Researcher
GBIForg
Download history
Download 1
Cleaned data
Data
Data attribution
Dataset DOI
Paper
Paper DOI
GBIF download
Data
Data attribution
Download DOI
Data Publisher
Reader
GBIF
bull Cite data sources bull Linked results to data bull Suggest data
corrections
bull Discover data usage bull Receive suggested
data corrections
bull Monitor data usage bull Enhance fitness-for-
use
bull Retrieve source data bull Reproduce results
GBIF AND DIGITAL OBJECT IDENTIFIERS
GBIF AND DIGITAL OBJECT IDENTIFIERS
httpwwwgbiforgdataset7e380070-f762-11e1-a439-00145eb45e9a
GBIF AND DIGITAL OBJECT IDENTIFIERS
httpwwwgbiforgdataset7e380070-f762-11e1-a439-00145eb45e9a
PUBLISHING DATA FROM RESEARCH
PUBLISHING DATA FROM RESEARCH
httpwwwgbiforgdataset4bde5856-6d9f-41cd-880a-2d64eac05b0d
wwwpnasorgcgidoi101073pnas1308933111
mdash Agricultural biodiversity Chair Elizabeth Arnaud Bioversity International
mdash Distribution modelling Chair Jorge Soberon University of Kansas
Next steps
bull Task group to consult with professional communities and prepare initial recommendations by GB22
bull Continue collaboration with University of Satildeo Paulo Brazil to develop user-based fitness-for-use lsquoprofilesrsquo for GBIForg
bull Future task groups on marine amp invasive species research
ENHANCING DATA FITNESS FOR USE bull 2015-16 objective Enhance fitness of data accessed via GBIForg for key
research uses through engaging expert communities and identify gaps
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
Datamdashby GBIF participant
NOTE Datasets are assigned to countries according to the location of the publishing institution including aggregated datasets with contributors from many other countries httpwwwgbiforg | 06 MAY 2015
1 United States 2433348 6 Finland 1162279
2 United Kingdom 2366907 7 Belgium 707414
3 Australia 2260641 8 Netherlands 628524
4 Sweden 2146770 9 Norway 252036
5 Denmark 1187322 10 Brazil 110487
1 United States 209481914 6 Finland 19626137
2 Sweden 50995697 7 Germany 18792652
3 United Kingdom 49538295 8 France 17549337
4 Australia 36989101 9 Norway 17425011
5 Netherlands 21577009 10 Denmark 10238708
Number of new records publishedmdashTop 10 participant Countries (1 Jan to 30 Apr 2015)
Total number of records publishedmdashTop 10 Participant Countries (as of 30 Apr 2015)
httpwwwgbiforgnewsroomconsultationsstrategicplan
GBIF STRATEGIC PLAN 2017-2021
KIITOS PALJON
To monitor biodiversity trends we need more than just presence data
Concern ndash Prescence-only data
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-06 12 individuals 1 km Butterfly transect
Vanessa cardui PlotB-2014-06 8 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-06 3 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Vanessa cardui PlotA-2014-06 6 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-06 4 individuals 1 km Butterfly transect
Inachis io PlotA-2014-06 1 individual 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-07 15 individuals 1 km Butterfly transect
Vanessa cardui PlotB-2014-07 4 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-07 1 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-08 8 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-08 2 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Platichthys flesus DiveX-20120301 3 individuals 500 m2 Fish dive survey
Sprattus sprattus DiveX-20120301 71 individuals 500 m2 Fish dive survey
Species Event Quantity Sample size Protocol
Vanessa cardui PlotA-2014-07 3 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-07 8 individuals 1 km Butterfly transect
Thecla betulae PlotA-2014-07 2 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotA-2014-08 1 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-08 3 individuals 1 km Butterfly transect
Comparable
Not comparable
EXTENDING GBIF FOR SAMPLE-BASED DATA
SAMPLE-BASED DATA
httpwwwgbiforgpage82105
SAMPLE-BASED DATA
httpeubon-iptgbiforgresourcedor=butterflies-monitoring-scheme-il
Taxon Concept Institution Collection
Taxon Name
Publication
Species Occurrence
Sequence
GBIF Data Index
Catalogue of Life
Conceptual biodiversity data model
Published data sets
Institution Catalogue
Collection Catalogue
Taxon Concept Catalogue
Taxon Name Catalogue
Publication Catalogue
Species Occurrence Catalogue
Sequence Catalogue Comprehensive
service-centred catalogues
Species occurrence record includes scientific name and no explicit species concept
GBIF in future should use services from a shared catalogue to get the best concept (and to add it if not already included)
Catalogues with compatible services form an ecosystem to organise access to distributed biodiversity information
Catalogues are also best place of offer tools and services to support and organise annotations and corrections
GBIF AND GLOBALLY CONNECTED DATA
- Open biodiversity information international perspectives
- Slide Number 2
- Slide Number 3
- Slide Number 4
- Slide Number 5
- Slide Number 6
- Slide Number 7
- Slide Number 8
- Types of data shared through GBIF
- GBIF BY THE NUMBERS
- Data published through GBIforg
- Data publishers
- Visits to GBIForg by Country
- Data download requests by country
- Citations in peer-reviewed research
- Research examples
- GBIF and Digital Object Identifiers
- Slide Number 18
- Slide Number 19
- GBIF and digital object identifiers
- GBIF and digital object identifiers
- Publishing data from research
- Publishing data from research
- Slide Number 24
- Slide Number 25
- Slide Number 26
- Slide Number 27
- Slide Number 28
- Datamdashby GBIF participant
- Slide Number 30
- Slide Number 31
- Concern ndash Prescence-only data
- Slide Number 33
- sample-based data
- sample-based data
- Slide Number 36
-
Sources of biodiversity data Collections field observations monitoring activities genomics citizen science remote sensing expert
knowledge historical literature
Uses of biodiversity data Taxonomy conservation biosecurity land-use planning climate change response crop development
resource management materials development forensics hellip
SOURCES AND USES
httpbiodiversityinformaticsorg httpcatalogueoflifeorg httpbiodiversityl ibraryorg httpboldsystemsorg httpeolorg
DIGITAL BIODIVERSITY KNOWLEDGE
DATA
SC
IEN
CE
POLI
CY
Science-Policy Interface IPBES
IUCN UNEP-WCMC Future Earth
GBIF TraitBank INSDC Catalogue
of Life
Citizen Science
Natural History
Collections Field
Surveys Laboratory
Data Remote Sensing Literature
National Governments
Strategic Plan for Biodiversity Aichi Targets
CBD FAO CMS CITES RAMSAR
Data catalogues
Coordinated analyses
Source data
Data-Science Interface GEO BON Map of Life
Expert assessments
Scientific research
Modeled variables
Commitments
Ecological Research
Taxonomic Research
Conservation Research
Agricultural Research
Human Health
Climate Change
Implementation amp monitoring
BIODIVERSITY EVIDENCE AND POLICY
httpwwwgbiforgwhoweworkwith
GBIF NETWORK PARTNERSHIPS AND AFFILIATIONS
GBIF
TYPES OF DATA SHARED THROUGH GBIF
Observations from field surveys
inventories and citizen scientists
Records extracted from literature
Specimens from museum and
herbarium collections
NEW Research projects surveys expeditions
sample-based data
GBIF BY THE NUMBERS 533667297
species occurrence records
14123 datasets
663 data-publishing
institutions
bull httpwwwgbiforg | 06 MAY 2015
Data published through GBIforg
httpwwwgbiforg | 6 MAY 2015
Trend in primary biodiversity records (millions)
100
150
200
250
300
350
400
450
500
550
600
Data publishers
A sharp rise in the number of data publishers in September 2013 results from institutions choosing to register as separate entities rather than sharing datasets through a single publisher at their national node institution httpwwwgbiforg | 06 MAY 2015
Trend in number of institutions registered as GBIF data publishers
200
250
300
350
400
450
500
550
600
650
700
Visits to GBIForg by Country
Google Analytics report for GBIForg April statistics skewed by errors introduced in late April and resolved in early May Access available upon request from commsgbiforg | 04 MAY 2015
1 United States 118049 6 France 5715
2 China 8083 7 United Kingdom 4984
3 Spain 6388 8 Brazil 4823
4 India 6321 9 Mexico 4577
5 Germany 6075 10 Colombia 3620
Apr 2015
Data download requests by country
Requests for download do not necessarily result in data actually being downloaded Based on country indicated by user login | 06 MAY 2015
1 Mexico 5838 6 Spain 2061
2 United States 4813 7 United Kingdom 1615
3 China 3359 8 Ecuador 1578
4 Denmark 3000 9 Colombia 1143
5 Brazil 2098 10 Germany 895
Total of
33144 requests from 3886 users in
120 countries islands and territories
1 Jan 2015 ndash 30 Apr 2015
Citations in peer-reviewed research
04 MAY 2015
Annual number of peer-reviewed publications using GBIF-mediated data
52
89
148
169
229
249
357
116
0
50
100
150
200
250
300
350
400
2008 2009 2010 2011 2012 2013 2014 2015 (Jan-Apr)
Research examples
bull Brown KA Parks KE Bethell CA et al Predicting plant diversity patterns in Madagascar understanding the effects of climate and land cover change in a biodiversity hotspot
bull Khoury CK Heider B Castantildeeda-Alvarez NP et al Distributions ex situ conservation priorities and genetic resource potential of crop wild relatives of sweet potato [Ipomoea batatas (L) Lam I series Batatas] Plant Science
bull Leach K Kelly R Cameron A Montgomery WI amp Reid N Expertly validated models and phylogenetically-controlled analysis suggests responses to climate change are related to species traits in the order Lagomorpha PLoS ONE
bull Shabani F Kumar L Nojoumian AH et al Projected future distribution of date palm and its potential use in alleviating micronutrient deficiency J Sci Food Agric
A complete archive of research citing used of GBIF can be accessed at httpwwwmendeleycomgroups1068301gbif-public-library 06 MAY 2015
Apr 2015
GBIF and Digital Object Identifiers
DOI ndash Digital Object Identifier bull Persistent resolvable identifiers bull Standard for published papers bull Simplify citing references bull Used in measuring impact
User searches for data through
GBIForg
DataCite Denmark
GBIForg GBIF assigns DOIs to
data downloads
Cleaned data
Data
Data attribution
Dataset DOI
Researcher
Paper
Paper DOI
User deposits cleaned dataset in a repository and gets
DOI for dataset
Published paper can give
resolvable links to GBIF
download andor to
cleaned dataset
User cleans data
User publishes
paper
GBIF download
Data
Data attribution
Download DOI
Download history
Download 1
GBIForg creates a download data set
GBIF AND DIGITAL OBJECT IDENTIFIERS
Researcher
GBIForg
Download history
Download 1
Cleaned data
Data
Data attribution
Dataset DOI
Paper
Paper DOI
GBIF download
Data
Data attribution
Download DOI
Data Publisher
Reader
GBIF
bull Cite data sources bull Linked results to data bull Suggest data
corrections
bull Discover data usage bull Receive suggested
data corrections
bull Monitor data usage bull Enhance fitness-for-
use
bull Retrieve source data bull Reproduce results
GBIF AND DIGITAL OBJECT IDENTIFIERS
GBIF AND DIGITAL OBJECT IDENTIFIERS
httpwwwgbiforgdataset7e380070-f762-11e1-a439-00145eb45e9a
GBIF AND DIGITAL OBJECT IDENTIFIERS
httpwwwgbiforgdataset7e380070-f762-11e1-a439-00145eb45e9a
PUBLISHING DATA FROM RESEARCH
PUBLISHING DATA FROM RESEARCH
httpwwwgbiforgdataset4bde5856-6d9f-41cd-880a-2d64eac05b0d
wwwpnasorgcgidoi101073pnas1308933111
mdash Agricultural biodiversity Chair Elizabeth Arnaud Bioversity International
mdash Distribution modelling Chair Jorge Soberon University of Kansas
Next steps
bull Task group to consult with professional communities and prepare initial recommendations by GB22
bull Continue collaboration with University of Satildeo Paulo Brazil to develop user-based fitness-for-use lsquoprofilesrsquo for GBIForg
bull Future task groups on marine amp invasive species research
ENHANCING DATA FITNESS FOR USE bull 2015-16 objective Enhance fitness of data accessed via GBIForg for key
research uses through engaging expert communities and identify gaps
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
Datamdashby GBIF participant
NOTE Datasets are assigned to countries according to the location of the publishing institution including aggregated datasets with contributors from many other countries httpwwwgbiforg | 06 MAY 2015
1 United States 2433348 6 Finland 1162279
2 United Kingdom 2366907 7 Belgium 707414
3 Australia 2260641 8 Netherlands 628524
4 Sweden 2146770 9 Norway 252036
5 Denmark 1187322 10 Brazil 110487
1 United States 209481914 6 Finland 19626137
2 Sweden 50995697 7 Germany 18792652
3 United Kingdom 49538295 8 France 17549337
4 Australia 36989101 9 Norway 17425011
5 Netherlands 21577009 10 Denmark 10238708
Number of new records publishedmdashTop 10 participant Countries (1 Jan to 30 Apr 2015)
Total number of records publishedmdashTop 10 Participant Countries (as of 30 Apr 2015)
httpwwwgbiforgnewsroomconsultationsstrategicplan
GBIF STRATEGIC PLAN 2017-2021
KIITOS PALJON
To monitor biodiversity trends we need more than just presence data
Concern ndash Prescence-only data
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-06 12 individuals 1 km Butterfly transect
Vanessa cardui PlotB-2014-06 8 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-06 3 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Vanessa cardui PlotA-2014-06 6 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-06 4 individuals 1 km Butterfly transect
Inachis io PlotA-2014-06 1 individual 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-07 15 individuals 1 km Butterfly transect
Vanessa cardui PlotB-2014-07 4 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-07 1 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-08 8 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-08 2 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Platichthys flesus DiveX-20120301 3 individuals 500 m2 Fish dive survey
Sprattus sprattus DiveX-20120301 71 individuals 500 m2 Fish dive survey
Species Event Quantity Sample size Protocol
Vanessa cardui PlotA-2014-07 3 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-07 8 individuals 1 km Butterfly transect
Thecla betulae PlotA-2014-07 2 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotA-2014-08 1 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-08 3 individuals 1 km Butterfly transect
Comparable
Not comparable
EXTENDING GBIF FOR SAMPLE-BASED DATA
SAMPLE-BASED DATA
httpwwwgbiforgpage82105
SAMPLE-BASED DATA
httpeubon-iptgbiforgresourcedor=butterflies-monitoring-scheme-il
Taxon Concept Institution Collection
Taxon Name
Publication
Species Occurrence
Sequence
GBIF Data Index
Catalogue of Life
Conceptual biodiversity data model
Published data sets
Institution Catalogue
Collection Catalogue
Taxon Concept Catalogue
Taxon Name Catalogue
Publication Catalogue
Species Occurrence Catalogue
Sequence Catalogue Comprehensive
service-centred catalogues
Species occurrence record includes scientific name and no explicit species concept
GBIF in future should use services from a shared catalogue to get the best concept (and to add it if not already included)
Catalogues with compatible services form an ecosystem to organise access to distributed biodiversity information
Catalogues are also best place of offer tools and services to support and organise annotations and corrections
GBIF AND GLOBALLY CONNECTED DATA
- Open biodiversity information international perspectives
- Slide Number 2
- Slide Number 3
- Slide Number 4
- Slide Number 5
- Slide Number 6
- Slide Number 7
- Slide Number 8
- Types of data shared through GBIF
- GBIF BY THE NUMBERS
- Data published through GBIforg
- Data publishers
- Visits to GBIForg by Country
- Data download requests by country
- Citations in peer-reviewed research
- Research examples
- GBIF and Digital Object Identifiers
- Slide Number 18
- Slide Number 19
- GBIF and digital object identifiers
- GBIF and digital object identifiers
- Publishing data from research
- Publishing data from research
- Slide Number 24
- Slide Number 25
- Slide Number 26
- Slide Number 27
- Slide Number 28
- Datamdashby GBIF participant
- Slide Number 30
- Slide Number 31
- Concern ndash Prescence-only data
- Slide Number 33
- sample-based data
- sample-based data
- Slide Number 36
-
httpbiodiversityinformaticsorg httpcatalogueoflifeorg httpbiodiversityl ibraryorg httpboldsystemsorg httpeolorg
DIGITAL BIODIVERSITY KNOWLEDGE
DATA
SC
IEN
CE
POLI
CY
Science-Policy Interface IPBES
IUCN UNEP-WCMC Future Earth
GBIF TraitBank INSDC Catalogue
of Life
Citizen Science
Natural History
Collections Field
Surveys Laboratory
Data Remote Sensing Literature
National Governments
Strategic Plan for Biodiversity Aichi Targets
CBD FAO CMS CITES RAMSAR
Data catalogues
Coordinated analyses
Source data
Data-Science Interface GEO BON Map of Life
Expert assessments
Scientific research
Modeled variables
Commitments
Ecological Research
Taxonomic Research
Conservation Research
Agricultural Research
Human Health
Climate Change
Implementation amp monitoring
BIODIVERSITY EVIDENCE AND POLICY
httpwwwgbiforgwhoweworkwith
GBIF NETWORK PARTNERSHIPS AND AFFILIATIONS
GBIF
TYPES OF DATA SHARED THROUGH GBIF
Observations from field surveys
inventories and citizen scientists
Records extracted from literature
Specimens from museum and
herbarium collections
NEW Research projects surveys expeditions
sample-based data
GBIF BY THE NUMBERS 533667297
species occurrence records
14123 datasets
663 data-publishing
institutions
bull httpwwwgbiforg | 06 MAY 2015
Data published through GBIforg
httpwwwgbiforg | 6 MAY 2015
Trend in primary biodiversity records (millions)
100
150
200
250
300
350
400
450
500
550
600
Data publishers
A sharp rise in the number of data publishers in September 2013 results from institutions choosing to register as separate entities rather than sharing datasets through a single publisher at their national node institution httpwwwgbiforg | 06 MAY 2015
Trend in number of institutions registered as GBIF data publishers
200
250
300
350
400
450
500
550
600
650
700
Visits to GBIForg by Country
Google Analytics report for GBIForg April statistics skewed by errors introduced in late April and resolved in early May Access available upon request from commsgbiforg | 04 MAY 2015
1 United States 118049 6 France 5715
2 China 8083 7 United Kingdom 4984
3 Spain 6388 8 Brazil 4823
4 India 6321 9 Mexico 4577
5 Germany 6075 10 Colombia 3620
Apr 2015
Data download requests by country
Requests for download do not necessarily result in data actually being downloaded Based on country indicated by user login | 06 MAY 2015
1 Mexico 5838 6 Spain 2061
2 United States 4813 7 United Kingdom 1615
3 China 3359 8 Ecuador 1578
4 Denmark 3000 9 Colombia 1143
5 Brazil 2098 10 Germany 895
Total of
33144 requests from 3886 users in
120 countries islands and territories
1 Jan 2015 ndash 30 Apr 2015
Citations in peer-reviewed research
04 MAY 2015
Annual number of peer-reviewed publications using GBIF-mediated data
52
89
148
169
229
249
357
116
0
50
100
150
200
250
300
350
400
2008 2009 2010 2011 2012 2013 2014 2015 (Jan-Apr)
Research examples
bull Brown KA Parks KE Bethell CA et al Predicting plant diversity patterns in Madagascar understanding the effects of climate and land cover change in a biodiversity hotspot
bull Khoury CK Heider B Castantildeeda-Alvarez NP et al Distributions ex situ conservation priorities and genetic resource potential of crop wild relatives of sweet potato [Ipomoea batatas (L) Lam I series Batatas] Plant Science
bull Leach K Kelly R Cameron A Montgomery WI amp Reid N Expertly validated models and phylogenetically-controlled analysis suggests responses to climate change are related to species traits in the order Lagomorpha PLoS ONE
bull Shabani F Kumar L Nojoumian AH et al Projected future distribution of date palm and its potential use in alleviating micronutrient deficiency J Sci Food Agric
A complete archive of research citing used of GBIF can be accessed at httpwwwmendeleycomgroups1068301gbif-public-library 06 MAY 2015
Apr 2015
GBIF and Digital Object Identifiers
DOI ndash Digital Object Identifier bull Persistent resolvable identifiers bull Standard for published papers bull Simplify citing references bull Used in measuring impact
User searches for data through
GBIForg
DataCite Denmark
GBIForg GBIF assigns DOIs to
data downloads
Cleaned data
Data
Data attribution
Dataset DOI
Researcher
Paper
Paper DOI
User deposits cleaned dataset in a repository and gets
DOI for dataset
Published paper can give
resolvable links to GBIF
download andor to
cleaned dataset
User cleans data
User publishes
paper
GBIF download
Data
Data attribution
Download DOI
Download history
Download 1
GBIForg creates a download data set
GBIF AND DIGITAL OBJECT IDENTIFIERS
Researcher
GBIForg
Download history
Download 1
Cleaned data
Data
Data attribution
Dataset DOI
Paper
Paper DOI
GBIF download
Data
Data attribution
Download DOI
Data Publisher
Reader
GBIF
bull Cite data sources bull Linked results to data bull Suggest data
corrections
bull Discover data usage bull Receive suggested
data corrections
bull Monitor data usage bull Enhance fitness-for-
use
bull Retrieve source data bull Reproduce results
GBIF AND DIGITAL OBJECT IDENTIFIERS
GBIF AND DIGITAL OBJECT IDENTIFIERS
httpwwwgbiforgdataset7e380070-f762-11e1-a439-00145eb45e9a
GBIF AND DIGITAL OBJECT IDENTIFIERS
httpwwwgbiforgdataset7e380070-f762-11e1-a439-00145eb45e9a
PUBLISHING DATA FROM RESEARCH
PUBLISHING DATA FROM RESEARCH
httpwwwgbiforgdataset4bde5856-6d9f-41cd-880a-2d64eac05b0d
wwwpnasorgcgidoi101073pnas1308933111
mdash Agricultural biodiversity Chair Elizabeth Arnaud Bioversity International
mdash Distribution modelling Chair Jorge Soberon University of Kansas
Next steps
bull Task group to consult with professional communities and prepare initial recommendations by GB22
bull Continue collaboration with University of Satildeo Paulo Brazil to develop user-based fitness-for-use lsquoprofilesrsquo for GBIForg
bull Future task groups on marine amp invasive species research
ENHANCING DATA FITNESS FOR USE bull 2015-16 objective Enhance fitness of data accessed via GBIForg for key
research uses through engaging expert communities and identify gaps
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
Datamdashby GBIF participant
NOTE Datasets are assigned to countries according to the location of the publishing institution including aggregated datasets with contributors from many other countries httpwwwgbiforg | 06 MAY 2015
1 United States 2433348 6 Finland 1162279
2 United Kingdom 2366907 7 Belgium 707414
3 Australia 2260641 8 Netherlands 628524
4 Sweden 2146770 9 Norway 252036
5 Denmark 1187322 10 Brazil 110487
1 United States 209481914 6 Finland 19626137
2 Sweden 50995697 7 Germany 18792652
3 United Kingdom 49538295 8 France 17549337
4 Australia 36989101 9 Norway 17425011
5 Netherlands 21577009 10 Denmark 10238708
Number of new records publishedmdashTop 10 participant Countries (1 Jan to 30 Apr 2015)
Total number of records publishedmdashTop 10 Participant Countries (as of 30 Apr 2015)
httpwwwgbiforgnewsroomconsultationsstrategicplan
GBIF STRATEGIC PLAN 2017-2021
KIITOS PALJON
To monitor biodiversity trends we need more than just presence data
Concern ndash Prescence-only data
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-06 12 individuals 1 km Butterfly transect
Vanessa cardui PlotB-2014-06 8 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-06 3 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Vanessa cardui PlotA-2014-06 6 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-06 4 individuals 1 km Butterfly transect
Inachis io PlotA-2014-06 1 individual 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-07 15 individuals 1 km Butterfly transect
Vanessa cardui PlotB-2014-07 4 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-07 1 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-08 8 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-08 2 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Platichthys flesus DiveX-20120301 3 individuals 500 m2 Fish dive survey
Sprattus sprattus DiveX-20120301 71 individuals 500 m2 Fish dive survey
Species Event Quantity Sample size Protocol
Vanessa cardui PlotA-2014-07 3 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-07 8 individuals 1 km Butterfly transect
Thecla betulae PlotA-2014-07 2 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotA-2014-08 1 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-08 3 individuals 1 km Butterfly transect
Comparable
Not comparable
EXTENDING GBIF FOR SAMPLE-BASED DATA
SAMPLE-BASED DATA
httpwwwgbiforgpage82105
SAMPLE-BASED DATA
httpeubon-iptgbiforgresourcedor=butterflies-monitoring-scheme-il
Taxon Concept Institution Collection
Taxon Name
Publication
Species Occurrence
Sequence
GBIF Data Index
Catalogue of Life
Conceptual biodiversity data model
Published data sets
Institution Catalogue
Collection Catalogue
Taxon Concept Catalogue
Taxon Name Catalogue
Publication Catalogue
Species Occurrence Catalogue
Sequence Catalogue Comprehensive
service-centred catalogues
Species occurrence record includes scientific name and no explicit species concept
GBIF in future should use services from a shared catalogue to get the best concept (and to add it if not already included)
Catalogues with compatible services form an ecosystem to organise access to distributed biodiversity information
Catalogues are also best place of offer tools and services to support and organise annotations and corrections
GBIF AND GLOBALLY CONNECTED DATA
- Open biodiversity information international perspectives
- Slide Number 2
- Slide Number 3
- Slide Number 4
- Slide Number 5
- Slide Number 6
- Slide Number 7
- Slide Number 8
- Types of data shared through GBIF
- GBIF BY THE NUMBERS
- Data published through GBIforg
- Data publishers
- Visits to GBIForg by Country
- Data download requests by country
- Citations in peer-reviewed research
- Research examples
- GBIF and Digital Object Identifiers
- Slide Number 18
- Slide Number 19
- GBIF and digital object identifiers
- GBIF and digital object identifiers
- Publishing data from research
- Publishing data from research
- Slide Number 24
- Slide Number 25
- Slide Number 26
- Slide Number 27
- Slide Number 28
- Datamdashby GBIF participant
- Slide Number 30
- Slide Number 31
- Concern ndash Prescence-only data
- Slide Number 33
- sample-based data
- sample-based data
- Slide Number 36
-
DATA
SC
IEN
CE
POLI
CY
Science-Policy Interface IPBES
IUCN UNEP-WCMC Future Earth
GBIF TraitBank INSDC Catalogue
of Life
Citizen Science
Natural History
Collections Field
Surveys Laboratory
Data Remote Sensing Literature
National Governments
Strategic Plan for Biodiversity Aichi Targets
CBD FAO CMS CITES RAMSAR
Data catalogues
Coordinated analyses
Source data
Data-Science Interface GEO BON Map of Life
Expert assessments
Scientific research
Modeled variables
Commitments
Ecological Research
Taxonomic Research
Conservation Research
Agricultural Research
Human Health
Climate Change
Implementation amp monitoring
BIODIVERSITY EVIDENCE AND POLICY
httpwwwgbiforgwhoweworkwith
GBIF NETWORK PARTNERSHIPS AND AFFILIATIONS
GBIF
TYPES OF DATA SHARED THROUGH GBIF
Observations from field surveys
inventories and citizen scientists
Records extracted from literature
Specimens from museum and
herbarium collections
NEW Research projects surveys expeditions
sample-based data
GBIF BY THE NUMBERS 533667297
species occurrence records
14123 datasets
663 data-publishing
institutions
bull httpwwwgbiforg | 06 MAY 2015
Data published through GBIforg
httpwwwgbiforg | 6 MAY 2015
Trend in primary biodiversity records (millions)
100
150
200
250
300
350
400
450
500
550
600
Data publishers
A sharp rise in the number of data publishers in September 2013 results from institutions choosing to register as separate entities rather than sharing datasets through a single publisher at their national node institution httpwwwgbiforg | 06 MAY 2015
Trend in number of institutions registered as GBIF data publishers
200
250
300
350
400
450
500
550
600
650
700
Visits to GBIForg by Country
Google Analytics report for GBIForg April statistics skewed by errors introduced in late April and resolved in early May Access available upon request from commsgbiforg | 04 MAY 2015
1 United States 118049 6 France 5715
2 China 8083 7 United Kingdom 4984
3 Spain 6388 8 Brazil 4823
4 India 6321 9 Mexico 4577
5 Germany 6075 10 Colombia 3620
Apr 2015
Data download requests by country
Requests for download do not necessarily result in data actually being downloaded Based on country indicated by user login | 06 MAY 2015
1 Mexico 5838 6 Spain 2061
2 United States 4813 7 United Kingdom 1615
3 China 3359 8 Ecuador 1578
4 Denmark 3000 9 Colombia 1143
5 Brazil 2098 10 Germany 895
Total of
33144 requests from 3886 users in
120 countries islands and territories
1 Jan 2015 ndash 30 Apr 2015
Citations in peer-reviewed research
04 MAY 2015
Annual number of peer-reviewed publications using GBIF-mediated data
52
89
148
169
229
249
357
116
0
50
100
150
200
250
300
350
400
2008 2009 2010 2011 2012 2013 2014 2015 (Jan-Apr)
Research examples
bull Brown KA Parks KE Bethell CA et al Predicting plant diversity patterns in Madagascar understanding the effects of climate and land cover change in a biodiversity hotspot
bull Khoury CK Heider B Castantildeeda-Alvarez NP et al Distributions ex situ conservation priorities and genetic resource potential of crop wild relatives of sweet potato [Ipomoea batatas (L) Lam I series Batatas] Plant Science
bull Leach K Kelly R Cameron A Montgomery WI amp Reid N Expertly validated models and phylogenetically-controlled analysis suggests responses to climate change are related to species traits in the order Lagomorpha PLoS ONE
bull Shabani F Kumar L Nojoumian AH et al Projected future distribution of date palm and its potential use in alleviating micronutrient deficiency J Sci Food Agric
A complete archive of research citing used of GBIF can be accessed at httpwwwmendeleycomgroups1068301gbif-public-library 06 MAY 2015
Apr 2015
GBIF and Digital Object Identifiers
DOI ndash Digital Object Identifier bull Persistent resolvable identifiers bull Standard for published papers bull Simplify citing references bull Used in measuring impact
User searches for data through
GBIForg
DataCite Denmark
GBIForg GBIF assigns DOIs to
data downloads
Cleaned data
Data
Data attribution
Dataset DOI
Researcher
Paper
Paper DOI
User deposits cleaned dataset in a repository and gets
DOI for dataset
Published paper can give
resolvable links to GBIF
download andor to
cleaned dataset
User cleans data
User publishes
paper
GBIF download
Data
Data attribution
Download DOI
Download history
Download 1
GBIForg creates a download data set
GBIF AND DIGITAL OBJECT IDENTIFIERS
Researcher
GBIForg
Download history
Download 1
Cleaned data
Data
Data attribution
Dataset DOI
Paper
Paper DOI
GBIF download
Data
Data attribution
Download DOI
Data Publisher
Reader
GBIF
bull Cite data sources bull Linked results to data bull Suggest data
corrections
bull Discover data usage bull Receive suggested
data corrections
bull Monitor data usage bull Enhance fitness-for-
use
bull Retrieve source data bull Reproduce results
GBIF AND DIGITAL OBJECT IDENTIFIERS
GBIF AND DIGITAL OBJECT IDENTIFIERS
httpwwwgbiforgdataset7e380070-f762-11e1-a439-00145eb45e9a
GBIF AND DIGITAL OBJECT IDENTIFIERS
httpwwwgbiforgdataset7e380070-f762-11e1-a439-00145eb45e9a
PUBLISHING DATA FROM RESEARCH
PUBLISHING DATA FROM RESEARCH
httpwwwgbiforgdataset4bde5856-6d9f-41cd-880a-2d64eac05b0d
wwwpnasorgcgidoi101073pnas1308933111
mdash Agricultural biodiversity Chair Elizabeth Arnaud Bioversity International
mdash Distribution modelling Chair Jorge Soberon University of Kansas
Next steps
bull Task group to consult with professional communities and prepare initial recommendations by GB22
bull Continue collaboration with University of Satildeo Paulo Brazil to develop user-based fitness-for-use lsquoprofilesrsquo for GBIForg
bull Future task groups on marine amp invasive species research
ENHANCING DATA FITNESS FOR USE bull 2015-16 objective Enhance fitness of data accessed via GBIForg for key
research uses through engaging expert communities and identify gaps
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
Datamdashby GBIF participant
NOTE Datasets are assigned to countries according to the location of the publishing institution including aggregated datasets with contributors from many other countries httpwwwgbiforg | 06 MAY 2015
1 United States 2433348 6 Finland 1162279
2 United Kingdom 2366907 7 Belgium 707414
3 Australia 2260641 8 Netherlands 628524
4 Sweden 2146770 9 Norway 252036
5 Denmark 1187322 10 Brazil 110487
1 United States 209481914 6 Finland 19626137
2 Sweden 50995697 7 Germany 18792652
3 United Kingdom 49538295 8 France 17549337
4 Australia 36989101 9 Norway 17425011
5 Netherlands 21577009 10 Denmark 10238708
Number of new records publishedmdashTop 10 participant Countries (1 Jan to 30 Apr 2015)
Total number of records publishedmdashTop 10 Participant Countries (as of 30 Apr 2015)
httpwwwgbiforgnewsroomconsultationsstrategicplan
GBIF STRATEGIC PLAN 2017-2021
KIITOS PALJON
To monitor biodiversity trends we need more than just presence data
Concern ndash Prescence-only data
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-06 12 individuals 1 km Butterfly transect
Vanessa cardui PlotB-2014-06 8 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-06 3 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Vanessa cardui PlotA-2014-06 6 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-06 4 individuals 1 km Butterfly transect
Inachis io PlotA-2014-06 1 individual 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-07 15 individuals 1 km Butterfly transect
Vanessa cardui PlotB-2014-07 4 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-07 1 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-08 8 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-08 2 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Platichthys flesus DiveX-20120301 3 individuals 500 m2 Fish dive survey
Sprattus sprattus DiveX-20120301 71 individuals 500 m2 Fish dive survey
Species Event Quantity Sample size Protocol
Vanessa cardui PlotA-2014-07 3 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-07 8 individuals 1 km Butterfly transect
Thecla betulae PlotA-2014-07 2 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotA-2014-08 1 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-08 3 individuals 1 km Butterfly transect
Comparable
Not comparable
EXTENDING GBIF FOR SAMPLE-BASED DATA
SAMPLE-BASED DATA
httpwwwgbiforgpage82105
SAMPLE-BASED DATA
httpeubon-iptgbiforgresourcedor=butterflies-monitoring-scheme-il
Taxon Concept Institution Collection
Taxon Name
Publication
Species Occurrence
Sequence
GBIF Data Index
Catalogue of Life
Conceptual biodiversity data model
Published data sets
Institution Catalogue
Collection Catalogue
Taxon Concept Catalogue
Taxon Name Catalogue
Publication Catalogue
Species Occurrence Catalogue
Sequence Catalogue Comprehensive
service-centred catalogues
Species occurrence record includes scientific name and no explicit species concept
GBIF in future should use services from a shared catalogue to get the best concept (and to add it if not already included)
Catalogues with compatible services form an ecosystem to organise access to distributed biodiversity information
Catalogues are also best place of offer tools and services to support and organise annotations and corrections
GBIF AND GLOBALLY CONNECTED DATA
- Open biodiversity information international perspectives
- Slide Number 2
- Slide Number 3
- Slide Number 4
- Slide Number 5
- Slide Number 6
- Slide Number 7
- Slide Number 8
- Types of data shared through GBIF
- GBIF BY THE NUMBERS
- Data published through GBIforg
- Data publishers
- Visits to GBIForg by Country
- Data download requests by country
- Citations in peer-reviewed research
- Research examples
- GBIF and Digital Object Identifiers
- Slide Number 18
- Slide Number 19
- GBIF and digital object identifiers
- GBIF and digital object identifiers
- Publishing data from research
- Publishing data from research
- Slide Number 24
- Slide Number 25
- Slide Number 26
- Slide Number 27
- Slide Number 28
- Datamdashby GBIF participant
- Slide Number 30
- Slide Number 31
- Concern ndash Prescence-only data
- Slide Number 33
- sample-based data
- sample-based data
- Slide Number 36
-
httpwwwgbiforgwhoweworkwith
GBIF NETWORK PARTNERSHIPS AND AFFILIATIONS
GBIF
TYPES OF DATA SHARED THROUGH GBIF
Observations from field surveys
inventories and citizen scientists
Records extracted from literature
Specimens from museum and
herbarium collections
NEW Research projects surveys expeditions
sample-based data
GBIF BY THE NUMBERS 533667297
species occurrence records
14123 datasets
663 data-publishing
institutions
bull httpwwwgbiforg | 06 MAY 2015
Data published through GBIforg
httpwwwgbiforg | 6 MAY 2015
Trend in primary biodiversity records (millions)
100
150
200
250
300
350
400
450
500
550
600
Data publishers
A sharp rise in the number of data publishers in September 2013 results from institutions choosing to register as separate entities rather than sharing datasets through a single publisher at their national node institution httpwwwgbiforg | 06 MAY 2015
Trend in number of institutions registered as GBIF data publishers
200
250
300
350
400
450
500
550
600
650
700
Visits to GBIForg by Country
Google Analytics report for GBIForg April statistics skewed by errors introduced in late April and resolved in early May Access available upon request from commsgbiforg | 04 MAY 2015
1 United States 118049 6 France 5715
2 China 8083 7 United Kingdom 4984
3 Spain 6388 8 Brazil 4823
4 India 6321 9 Mexico 4577
5 Germany 6075 10 Colombia 3620
Apr 2015
Data download requests by country
Requests for download do not necessarily result in data actually being downloaded Based on country indicated by user login | 06 MAY 2015
1 Mexico 5838 6 Spain 2061
2 United States 4813 7 United Kingdom 1615
3 China 3359 8 Ecuador 1578
4 Denmark 3000 9 Colombia 1143
5 Brazil 2098 10 Germany 895
Total of
33144 requests from 3886 users in
120 countries islands and territories
1 Jan 2015 ndash 30 Apr 2015
Citations in peer-reviewed research
04 MAY 2015
Annual number of peer-reviewed publications using GBIF-mediated data
52
89
148
169
229
249
357
116
0
50
100
150
200
250
300
350
400
2008 2009 2010 2011 2012 2013 2014 2015 (Jan-Apr)
Research examples
bull Brown KA Parks KE Bethell CA et al Predicting plant diversity patterns in Madagascar understanding the effects of climate and land cover change in a biodiversity hotspot
bull Khoury CK Heider B Castantildeeda-Alvarez NP et al Distributions ex situ conservation priorities and genetic resource potential of crop wild relatives of sweet potato [Ipomoea batatas (L) Lam I series Batatas] Plant Science
bull Leach K Kelly R Cameron A Montgomery WI amp Reid N Expertly validated models and phylogenetically-controlled analysis suggests responses to climate change are related to species traits in the order Lagomorpha PLoS ONE
bull Shabani F Kumar L Nojoumian AH et al Projected future distribution of date palm and its potential use in alleviating micronutrient deficiency J Sci Food Agric
A complete archive of research citing used of GBIF can be accessed at httpwwwmendeleycomgroups1068301gbif-public-library 06 MAY 2015
Apr 2015
GBIF and Digital Object Identifiers
DOI ndash Digital Object Identifier bull Persistent resolvable identifiers bull Standard for published papers bull Simplify citing references bull Used in measuring impact
User searches for data through
GBIForg
DataCite Denmark
GBIForg GBIF assigns DOIs to
data downloads
Cleaned data
Data
Data attribution
Dataset DOI
Researcher
Paper
Paper DOI
User deposits cleaned dataset in a repository and gets
DOI for dataset
Published paper can give
resolvable links to GBIF
download andor to
cleaned dataset
User cleans data
User publishes
paper
GBIF download
Data
Data attribution
Download DOI
Download history
Download 1
GBIForg creates a download data set
GBIF AND DIGITAL OBJECT IDENTIFIERS
Researcher
GBIForg
Download history
Download 1
Cleaned data
Data
Data attribution
Dataset DOI
Paper
Paper DOI
GBIF download
Data
Data attribution
Download DOI
Data Publisher
Reader
GBIF
bull Cite data sources bull Linked results to data bull Suggest data
corrections
bull Discover data usage bull Receive suggested
data corrections
bull Monitor data usage bull Enhance fitness-for-
use
bull Retrieve source data bull Reproduce results
GBIF AND DIGITAL OBJECT IDENTIFIERS
GBIF AND DIGITAL OBJECT IDENTIFIERS
httpwwwgbiforgdataset7e380070-f762-11e1-a439-00145eb45e9a
GBIF AND DIGITAL OBJECT IDENTIFIERS
httpwwwgbiforgdataset7e380070-f762-11e1-a439-00145eb45e9a
PUBLISHING DATA FROM RESEARCH
PUBLISHING DATA FROM RESEARCH
httpwwwgbiforgdataset4bde5856-6d9f-41cd-880a-2d64eac05b0d
wwwpnasorgcgidoi101073pnas1308933111
mdash Agricultural biodiversity Chair Elizabeth Arnaud Bioversity International
mdash Distribution modelling Chair Jorge Soberon University of Kansas
Next steps
bull Task group to consult with professional communities and prepare initial recommendations by GB22
bull Continue collaboration with University of Satildeo Paulo Brazil to develop user-based fitness-for-use lsquoprofilesrsquo for GBIForg
bull Future task groups on marine amp invasive species research
ENHANCING DATA FITNESS FOR USE bull 2015-16 objective Enhance fitness of data accessed via GBIForg for key
research uses through engaging expert communities and identify gaps
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
Datamdashby GBIF participant
NOTE Datasets are assigned to countries according to the location of the publishing institution including aggregated datasets with contributors from many other countries httpwwwgbiforg | 06 MAY 2015
1 United States 2433348 6 Finland 1162279
2 United Kingdom 2366907 7 Belgium 707414
3 Australia 2260641 8 Netherlands 628524
4 Sweden 2146770 9 Norway 252036
5 Denmark 1187322 10 Brazil 110487
1 United States 209481914 6 Finland 19626137
2 Sweden 50995697 7 Germany 18792652
3 United Kingdom 49538295 8 France 17549337
4 Australia 36989101 9 Norway 17425011
5 Netherlands 21577009 10 Denmark 10238708
Number of new records publishedmdashTop 10 participant Countries (1 Jan to 30 Apr 2015)
Total number of records publishedmdashTop 10 Participant Countries (as of 30 Apr 2015)
httpwwwgbiforgnewsroomconsultationsstrategicplan
GBIF STRATEGIC PLAN 2017-2021
KIITOS PALJON
To monitor biodiversity trends we need more than just presence data
Concern ndash Prescence-only data
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-06 12 individuals 1 km Butterfly transect
Vanessa cardui PlotB-2014-06 8 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-06 3 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Vanessa cardui PlotA-2014-06 6 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-06 4 individuals 1 km Butterfly transect
Inachis io PlotA-2014-06 1 individual 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-07 15 individuals 1 km Butterfly transect
Vanessa cardui PlotB-2014-07 4 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-07 1 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-08 8 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-08 2 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Platichthys flesus DiveX-20120301 3 individuals 500 m2 Fish dive survey
Sprattus sprattus DiveX-20120301 71 individuals 500 m2 Fish dive survey
Species Event Quantity Sample size Protocol
Vanessa cardui PlotA-2014-07 3 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-07 8 individuals 1 km Butterfly transect
Thecla betulae PlotA-2014-07 2 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotA-2014-08 1 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-08 3 individuals 1 km Butterfly transect
Comparable
Not comparable
EXTENDING GBIF FOR SAMPLE-BASED DATA
SAMPLE-BASED DATA
httpwwwgbiforgpage82105
SAMPLE-BASED DATA
httpeubon-iptgbiforgresourcedor=butterflies-monitoring-scheme-il
Taxon Concept Institution Collection
Taxon Name
Publication
Species Occurrence
Sequence
GBIF Data Index
Catalogue of Life
Conceptual biodiversity data model
Published data sets
Institution Catalogue
Collection Catalogue
Taxon Concept Catalogue
Taxon Name Catalogue
Publication Catalogue
Species Occurrence Catalogue
Sequence Catalogue Comprehensive
service-centred catalogues
Species occurrence record includes scientific name and no explicit species concept
GBIF in future should use services from a shared catalogue to get the best concept (and to add it if not already included)
Catalogues with compatible services form an ecosystem to organise access to distributed biodiversity information
Catalogues are also best place of offer tools and services to support and organise annotations and corrections
GBIF AND GLOBALLY CONNECTED DATA
- Open biodiversity information international perspectives
- Slide Number 2
- Slide Number 3
- Slide Number 4
- Slide Number 5
- Slide Number 6
- Slide Number 7
- Slide Number 8
- Types of data shared through GBIF
- GBIF BY THE NUMBERS
- Data published through GBIforg
- Data publishers
- Visits to GBIForg by Country
- Data download requests by country
- Citations in peer-reviewed research
- Research examples
- GBIF and Digital Object Identifiers
- Slide Number 18
- Slide Number 19
- GBIF and digital object identifiers
- GBIF and digital object identifiers
- Publishing data from research
- Publishing data from research
- Slide Number 24
- Slide Number 25
- Slide Number 26
- Slide Number 27
- Slide Number 28
- Datamdashby GBIF participant
- Slide Number 30
- Slide Number 31
- Concern ndash Prescence-only data
- Slide Number 33
- sample-based data
- sample-based data
- Slide Number 36
-
GBIF
TYPES OF DATA SHARED THROUGH GBIF
Observations from field surveys
inventories and citizen scientists
Records extracted from literature
Specimens from museum and
herbarium collections
NEW Research projects surveys expeditions
sample-based data
GBIF BY THE NUMBERS 533667297
species occurrence records
14123 datasets
663 data-publishing
institutions
bull httpwwwgbiforg | 06 MAY 2015
Data published through GBIforg
httpwwwgbiforg | 6 MAY 2015
Trend in primary biodiversity records (millions)
100
150
200
250
300
350
400
450
500
550
600
Data publishers
A sharp rise in the number of data publishers in September 2013 results from institutions choosing to register as separate entities rather than sharing datasets through a single publisher at their national node institution httpwwwgbiforg | 06 MAY 2015
Trend in number of institutions registered as GBIF data publishers
200
250
300
350
400
450
500
550
600
650
700
Visits to GBIForg by Country
Google Analytics report for GBIForg April statistics skewed by errors introduced in late April and resolved in early May Access available upon request from commsgbiforg | 04 MAY 2015
1 United States 118049 6 France 5715
2 China 8083 7 United Kingdom 4984
3 Spain 6388 8 Brazil 4823
4 India 6321 9 Mexico 4577
5 Germany 6075 10 Colombia 3620
Apr 2015
Data download requests by country
Requests for download do not necessarily result in data actually being downloaded Based on country indicated by user login | 06 MAY 2015
1 Mexico 5838 6 Spain 2061
2 United States 4813 7 United Kingdom 1615
3 China 3359 8 Ecuador 1578
4 Denmark 3000 9 Colombia 1143
5 Brazil 2098 10 Germany 895
Total of
33144 requests from 3886 users in
120 countries islands and territories
1 Jan 2015 ndash 30 Apr 2015
Citations in peer-reviewed research
04 MAY 2015
Annual number of peer-reviewed publications using GBIF-mediated data
52
89
148
169
229
249
357
116
0
50
100
150
200
250
300
350
400
2008 2009 2010 2011 2012 2013 2014 2015 (Jan-Apr)
Research examples
bull Brown KA Parks KE Bethell CA et al Predicting plant diversity patterns in Madagascar understanding the effects of climate and land cover change in a biodiversity hotspot
bull Khoury CK Heider B Castantildeeda-Alvarez NP et al Distributions ex situ conservation priorities and genetic resource potential of crop wild relatives of sweet potato [Ipomoea batatas (L) Lam I series Batatas] Plant Science
bull Leach K Kelly R Cameron A Montgomery WI amp Reid N Expertly validated models and phylogenetically-controlled analysis suggests responses to climate change are related to species traits in the order Lagomorpha PLoS ONE
bull Shabani F Kumar L Nojoumian AH et al Projected future distribution of date palm and its potential use in alleviating micronutrient deficiency J Sci Food Agric
A complete archive of research citing used of GBIF can be accessed at httpwwwmendeleycomgroups1068301gbif-public-library 06 MAY 2015
Apr 2015
GBIF and Digital Object Identifiers
DOI ndash Digital Object Identifier bull Persistent resolvable identifiers bull Standard for published papers bull Simplify citing references bull Used in measuring impact
User searches for data through
GBIForg
DataCite Denmark
GBIForg GBIF assigns DOIs to
data downloads
Cleaned data
Data
Data attribution
Dataset DOI
Researcher
Paper
Paper DOI
User deposits cleaned dataset in a repository and gets
DOI for dataset
Published paper can give
resolvable links to GBIF
download andor to
cleaned dataset
User cleans data
User publishes
paper
GBIF download
Data
Data attribution
Download DOI
Download history
Download 1
GBIForg creates a download data set
GBIF AND DIGITAL OBJECT IDENTIFIERS
Researcher
GBIForg
Download history
Download 1
Cleaned data
Data
Data attribution
Dataset DOI
Paper
Paper DOI
GBIF download
Data
Data attribution
Download DOI
Data Publisher
Reader
GBIF
bull Cite data sources bull Linked results to data bull Suggest data
corrections
bull Discover data usage bull Receive suggested
data corrections
bull Monitor data usage bull Enhance fitness-for-
use
bull Retrieve source data bull Reproduce results
GBIF AND DIGITAL OBJECT IDENTIFIERS
GBIF AND DIGITAL OBJECT IDENTIFIERS
httpwwwgbiforgdataset7e380070-f762-11e1-a439-00145eb45e9a
GBIF AND DIGITAL OBJECT IDENTIFIERS
httpwwwgbiforgdataset7e380070-f762-11e1-a439-00145eb45e9a
PUBLISHING DATA FROM RESEARCH
PUBLISHING DATA FROM RESEARCH
httpwwwgbiforgdataset4bde5856-6d9f-41cd-880a-2d64eac05b0d
wwwpnasorgcgidoi101073pnas1308933111
mdash Agricultural biodiversity Chair Elizabeth Arnaud Bioversity International
mdash Distribution modelling Chair Jorge Soberon University of Kansas
Next steps
bull Task group to consult with professional communities and prepare initial recommendations by GB22
bull Continue collaboration with University of Satildeo Paulo Brazil to develop user-based fitness-for-use lsquoprofilesrsquo for GBIForg
bull Future task groups on marine amp invasive species research
ENHANCING DATA FITNESS FOR USE bull 2015-16 objective Enhance fitness of data accessed via GBIForg for key
research uses through engaging expert communities and identify gaps
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
Datamdashby GBIF participant
NOTE Datasets are assigned to countries according to the location of the publishing institution including aggregated datasets with contributors from many other countries httpwwwgbiforg | 06 MAY 2015
1 United States 2433348 6 Finland 1162279
2 United Kingdom 2366907 7 Belgium 707414
3 Australia 2260641 8 Netherlands 628524
4 Sweden 2146770 9 Norway 252036
5 Denmark 1187322 10 Brazil 110487
1 United States 209481914 6 Finland 19626137
2 Sweden 50995697 7 Germany 18792652
3 United Kingdom 49538295 8 France 17549337
4 Australia 36989101 9 Norway 17425011
5 Netherlands 21577009 10 Denmark 10238708
Number of new records publishedmdashTop 10 participant Countries (1 Jan to 30 Apr 2015)
Total number of records publishedmdashTop 10 Participant Countries (as of 30 Apr 2015)
httpwwwgbiforgnewsroomconsultationsstrategicplan
GBIF STRATEGIC PLAN 2017-2021
KIITOS PALJON
To monitor biodiversity trends we need more than just presence data
Concern ndash Prescence-only data
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-06 12 individuals 1 km Butterfly transect
Vanessa cardui PlotB-2014-06 8 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-06 3 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Vanessa cardui PlotA-2014-06 6 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-06 4 individuals 1 km Butterfly transect
Inachis io PlotA-2014-06 1 individual 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-07 15 individuals 1 km Butterfly transect
Vanessa cardui PlotB-2014-07 4 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-07 1 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-08 8 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-08 2 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Platichthys flesus DiveX-20120301 3 individuals 500 m2 Fish dive survey
Sprattus sprattus DiveX-20120301 71 individuals 500 m2 Fish dive survey
Species Event Quantity Sample size Protocol
Vanessa cardui PlotA-2014-07 3 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-07 8 individuals 1 km Butterfly transect
Thecla betulae PlotA-2014-07 2 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotA-2014-08 1 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-08 3 individuals 1 km Butterfly transect
Comparable
Not comparable
EXTENDING GBIF FOR SAMPLE-BASED DATA
SAMPLE-BASED DATA
httpwwwgbiforgpage82105
SAMPLE-BASED DATA
httpeubon-iptgbiforgresourcedor=butterflies-monitoring-scheme-il
Taxon Concept Institution Collection
Taxon Name
Publication
Species Occurrence
Sequence
GBIF Data Index
Catalogue of Life
Conceptual biodiversity data model
Published data sets
Institution Catalogue
Collection Catalogue
Taxon Concept Catalogue
Taxon Name Catalogue
Publication Catalogue
Species Occurrence Catalogue
Sequence Catalogue Comprehensive
service-centred catalogues
Species occurrence record includes scientific name and no explicit species concept
GBIF in future should use services from a shared catalogue to get the best concept (and to add it if not already included)
Catalogues with compatible services form an ecosystem to organise access to distributed biodiversity information
Catalogues are also best place of offer tools and services to support and organise annotations and corrections
GBIF AND GLOBALLY CONNECTED DATA
- Open biodiversity information international perspectives
- Slide Number 2
- Slide Number 3
- Slide Number 4
- Slide Number 5
- Slide Number 6
- Slide Number 7
- Slide Number 8
- Types of data shared through GBIF
- GBIF BY THE NUMBERS
- Data published through GBIforg
- Data publishers
- Visits to GBIForg by Country
- Data download requests by country
- Citations in peer-reviewed research
- Research examples
- GBIF and Digital Object Identifiers
- Slide Number 18
- Slide Number 19
- GBIF and digital object identifiers
- GBIF and digital object identifiers
- Publishing data from research
- Publishing data from research
- Slide Number 24
- Slide Number 25
- Slide Number 26
- Slide Number 27
- Slide Number 28
- Datamdashby GBIF participant
- Slide Number 30
- Slide Number 31
- Concern ndash Prescence-only data
- Slide Number 33
- sample-based data
- sample-based data
- Slide Number 36
-
TYPES OF DATA SHARED THROUGH GBIF
Observations from field surveys
inventories and citizen scientists
Records extracted from literature
Specimens from museum and
herbarium collections
NEW Research projects surveys expeditions
sample-based data
GBIF BY THE NUMBERS 533667297
species occurrence records
14123 datasets
663 data-publishing
institutions
bull httpwwwgbiforg | 06 MAY 2015
Data published through GBIforg
httpwwwgbiforg | 6 MAY 2015
Trend in primary biodiversity records (millions)
100
150
200
250
300
350
400
450
500
550
600
Data publishers
A sharp rise in the number of data publishers in September 2013 results from institutions choosing to register as separate entities rather than sharing datasets through a single publisher at their national node institution httpwwwgbiforg | 06 MAY 2015
Trend in number of institutions registered as GBIF data publishers
200
250
300
350
400
450
500
550
600
650
700
Visits to GBIForg by Country
Google Analytics report for GBIForg April statistics skewed by errors introduced in late April and resolved in early May Access available upon request from commsgbiforg | 04 MAY 2015
1 United States 118049 6 France 5715
2 China 8083 7 United Kingdom 4984
3 Spain 6388 8 Brazil 4823
4 India 6321 9 Mexico 4577
5 Germany 6075 10 Colombia 3620
Apr 2015
Data download requests by country
Requests for download do not necessarily result in data actually being downloaded Based on country indicated by user login | 06 MAY 2015
1 Mexico 5838 6 Spain 2061
2 United States 4813 7 United Kingdom 1615
3 China 3359 8 Ecuador 1578
4 Denmark 3000 9 Colombia 1143
5 Brazil 2098 10 Germany 895
Total of
33144 requests from 3886 users in
120 countries islands and territories
1 Jan 2015 ndash 30 Apr 2015
Citations in peer-reviewed research
04 MAY 2015
Annual number of peer-reviewed publications using GBIF-mediated data
52
89
148
169
229
249
357
116
0
50
100
150
200
250
300
350
400
2008 2009 2010 2011 2012 2013 2014 2015 (Jan-Apr)
Research examples
bull Brown KA Parks KE Bethell CA et al Predicting plant diversity patterns in Madagascar understanding the effects of climate and land cover change in a biodiversity hotspot
bull Khoury CK Heider B Castantildeeda-Alvarez NP et al Distributions ex situ conservation priorities and genetic resource potential of crop wild relatives of sweet potato [Ipomoea batatas (L) Lam I series Batatas] Plant Science
bull Leach K Kelly R Cameron A Montgomery WI amp Reid N Expertly validated models and phylogenetically-controlled analysis suggests responses to climate change are related to species traits in the order Lagomorpha PLoS ONE
bull Shabani F Kumar L Nojoumian AH et al Projected future distribution of date palm and its potential use in alleviating micronutrient deficiency J Sci Food Agric
A complete archive of research citing used of GBIF can be accessed at httpwwwmendeleycomgroups1068301gbif-public-library 06 MAY 2015
Apr 2015
GBIF and Digital Object Identifiers
DOI ndash Digital Object Identifier bull Persistent resolvable identifiers bull Standard for published papers bull Simplify citing references bull Used in measuring impact
User searches for data through
GBIForg
DataCite Denmark
GBIForg GBIF assigns DOIs to
data downloads
Cleaned data
Data
Data attribution
Dataset DOI
Researcher
Paper
Paper DOI
User deposits cleaned dataset in a repository and gets
DOI for dataset
Published paper can give
resolvable links to GBIF
download andor to
cleaned dataset
User cleans data
User publishes
paper
GBIF download
Data
Data attribution
Download DOI
Download history
Download 1
GBIForg creates a download data set
GBIF AND DIGITAL OBJECT IDENTIFIERS
Researcher
GBIForg
Download history
Download 1
Cleaned data
Data
Data attribution
Dataset DOI
Paper
Paper DOI
GBIF download
Data
Data attribution
Download DOI
Data Publisher
Reader
GBIF
bull Cite data sources bull Linked results to data bull Suggest data
corrections
bull Discover data usage bull Receive suggested
data corrections
bull Monitor data usage bull Enhance fitness-for-
use
bull Retrieve source data bull Reproduce results
GBIF AND DIGITAL OBJECT IDENTIFIERS
GBIF AND DIGITAL OBJECT IDENTIFIERS
httpwwwgbiforgdataset7e380070-f762-11e1-a439-00145eb45e9a
GBIF AND DIGITAL OBJECT IDENTIFIERS
httpwwwgbiforgdataset7e380070-f762-11e1-a439-00145eb45e9a
PUBLISHING DATA FROM RESEARCH
PUBLISHING DATA FROM RESEARCH
httpwwwgbiforgdataset4bde5856-6d9f-41cd-880a-2d64eac05b0d
wwwpnasorgcgidoi101073pnas1308933111
mdash Agricultural biodiversity Chair Elizabeth Arnaud Bioversity International
mdash Distribution modelling Chair Jorge Soberon University of Kansas
Next steps
bull Task group to consult with professional communities and prepare initial recommendations by GB22
bull Continue collaboration with University of Satildeo Paulo Brazil to develop user-based fitness-for-use lsquoprofilesrsquo for GBIForg
bull Future task groups on marine amp invasive species research
ENHANCING DATA FITNESS FOR USE bull 2015-16 objective Enhance fitness of data accessed via GBIForg for key
research uses through engaging expert communities and identify gaps
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
Datamdashby GBIF participant
NOTE Datasets are assigned to countries according to the location of the publishing institution including aggregated datasets with contributors from many other countries httpwwwgbiforg | 06 MAY 2015
1 United States 2433348 6 Finland 1162279
2 United Kingdom 2366907 7 Belgium 707414
3 Australia 2260641 8 Netherlands 628524
4 Sweden 2146770 9 Norway 252036
5 Denmark 1187322 10 Brazil 110487
1 United States 209481914 6 Finland 19626137
2 Sweden 50995697 7 Germany 18792652
3 United Kingdom 49538295 8 France 17549337
4 Australia 36989101 9 Norway 17425011
5 Netherlands 21577009 10 Denmark 10238708
Number of new records publishedmdashTop 10 participant Countries (1 Jan to 30 Apr 2015)
Total number of records publishedmdashTop 10 Participant Countries (as of 30 Apr 2015)
httpwwwgbiforgnewsroomconsultationsstrategicplan
GBIF STRATEGIC PLAN 2017-2021
KIITOS PALJON
To monitor biodiversity trends we need more than just presence data
Concern ndash Prescence-only data
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-06 12 individuals 1 km Butterfly transect
Vanessa cardui PlotB-2014-06 8 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-06 3 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Vanessa cardui PlotA-2014-06 6 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-06 4 individuals 1 km Butterfly transect
Inachis io PlotA-2014-06 1 individual 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-07 15 individuals 1 km Butterfly transect
Vanessa cardui PlotB-2014-07 4 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-07 1 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-08 8 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-08 2 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Platichthys flesus DiveX-20120301 3 individuals 500 m2 Fish dive survey
Sprattus sprattus DiveX-20120301 71 individuals 500 m2 Fish dive survey
Species Event Quantity Sample size Protocol
Vanessa cardui PlotA-2014-07 3 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-07 8 individuals 1 km Butterfly transect
Thecla betulae PlotA-2014-07 2 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotA-2014-08 1 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-08 3 individuals 1 km Butterfly transect
Comparable
Not comparable
EXTENDING GBIF FOR SAMPLE-BASED DATA
SAMPLE-BASED DATA
httpwwwgbiforgpage82105
SAMPLE-BASED DATA
httpeubon-iptgbiforgresourcedor=butterflies-monitoring-scheme-il
Taxon Concept Institution Collection
Taxon Name
Publication
Species Occurrence
Sequence
GBIF Data Index
Catalogue of Life
Conceptual biodiversity data model
Published data sets
Institution Catalogue
Collection Catalogue
Taxon Concept Catalogue
Taxon Name Catalogue
Publication Catalogue
Species Occurrence Catalogue
Sequence Catalogue Comprehensive
service-centred catalogues
Species occurrence record includes scientific name and no explicit species concept
GBIF in future should use services from a shared catalogue to get the best concept (and to add it if not already included)
Catalogues with compatible services form an ecosystem to organise access to distributed biodiversity information
Catalogues are also best place of offer tools and services to support and organise annotations and corrections
GBIF AND GLOBALLY CONNECTED DATA
- Open biodiversity information international perspectives
- Slide Number 2
- Slide Number 3
- Slide Number 4
- Slide Number 5
- Slide Number 6
- Slide Number 7
- Slide Number 8
- Types of data shared through GBIF
- GBIF BY THE NUMBERS
- Data published through GBIforg
- Data publishers
- Visits to GBIForg by Country
- Data download requests by country
- Citations in peer-reviewed research
- Research examples
- GBIF and Digital Object Identifiers
- Slide Number 18
- Slide Number 19
- GBIF and digital object identifiers
- GBIF and digital object identifiers
- Publishing data from research
- Publishing data from research
- Slide Number 24
- Slide Number 25
- Slide Number 26
- Slide Number 27
- Slide Number 28
- Datamdashby GBIF participant
- Slide Number 30
- Slide Number 31
- Concern ndash Prescence-only data
- Slide Number 33
- sample-based data
- sample-based data
- Slide Number 36
-
GBIF BY THE NUMBERS 533667297
species occurrence records
14123 datasets
663 data-publishing
institutions
bull httpwwwgbiforg | 06 MAY 2015
Data published through GBIforg
httpwwwgbiforg | 6 MAY 2015
Trend in primary biodiversity records (millions)
100
150
200
250
300
350
400
450
500
550
600
Data publishers
A sharp rise in the number of data publishers in September 2013 results from institutions choosing to register as separate entities rather than sharing datasets through a single publisher at their national node institution httpwwwgbiforg | 06 MAY 2015
Trend in number of institutions registered as GBIF data publishers
200
250
300
350
400
450
500
550
600
650
700
Visits to GBIForg by Country
Google Analytics report for GBIForg April statistics skewed by errors introduced in late April and resolved in early May Access available upon request from commsgbiforg | 04 MAY 2015
1 United States 118049 6 France 5715
2 China 8083 7 United Kingdom 4984
3 Spain 6388 8 Brazil 4823
4 India 6321 9 Mexico 4577
5 Germany 6075 10 Colombia 3620
Apr 2015
Data download requests by country
Requests for download do not necessarily result in data actually being downloaded Based on country indicated by user login | 06 MAY 2015
1 Mexico 5838 6 Spain 2061
2 United States 4813 7 United Kingdom 1615
3 China 3359 8 Ecuador 1578
4 Denmark 3000 9 Colombia 1143
5 Brazil 2098 10 Germany 895
Total of
33144 requests from 3886 users in
120 countries islands and territories
1 Jan 2015 ndash 30 Apr 2015
Citations in peer-reviewed research
04 MAY 2015
Annual number of peer-reviewed publications using GBIF-mediated data
52
89
148
169
229
249
357
116
0
50
100
150
200
250
300
350
400
2008 2009 2010 2011 2012 2013 2014 2015 (Jan-Apr)
Research examples
bull Brown KA Parks KE Bethell CA et al Predicting plant diversity patterns in Madagascar understanding the effects of climate and land cover change in a biodiversity hotspot
bull Khoury CK Heider B Castantildeeda-Alvarez NP et al Distributions ex situ conservation priorities and genetic resource potential of crop wild relatives of sweet potato [Ipomoea batatas (L) Lam I series Batatas] Plant Science
bull Leach K Kelly R Cameron A Montgomery WI amp Reid N Expertly validated models and phylogenetically-controlled analysis suggests responses to climate change are related to species traits in the order Lagomorpha PLoS ONE
bull Shabani F Kumar L Nojoumian AH et al Projected future distribution of date palm and its potential use in alleviating micronutrient deficiency J Sci Food Agric
A complete archive of research citing used of GBIF can be accessed at httpwwwmendeleycomgroups1068301gbif-public-library 06 MAY 2015
Apr 2015
GBIF and Digital Object Identifiers
DOI ndash Digital Object Identifier bull Persistent resolvable identifiers bull Standard for published papers bull Simplify citing references bull Used in measuring impact
User searches for data through
GBIForg
DataCite Denmark
GBIForg GBIF assigns DOIs to
data downloads
Cleaned data
Data
Data attribution
Dataset DOI
Researcher
Paper
Paper DOI
User deposits cleaned dataset in a repository and gets
DOI for dataset
Published paper can give
resolvable links to GBIF
download andor to
cleaned dataset
User cleans data
User publishes
paper
GBIF download
Data
Data attribution
Download DOI
Download history
Download 1
GBIForg creates a download data set
GBIF AND DIGITAL OBJECT IDENTIFIERS
Researcher
GBIForg
Download history
Download 1
Cleaned data
Data
Data attribution
Dataset DOI
Paper
Paper DOI
GBIF download
Data
Data attribution
Download DOI
Data Publisher
Reader
GBIF
bull Cite data sources bull Linked results to data bull Suggest data
corrections
bull Discover data usage bull Receive suggested
data corrections
bull Monitor data usage bull Enhance fitness-for-
use
bull Retrieve source data bull Reproduce results
GBIF AND DIGITAL OBJECT IDENTIFIERS
GBIF AND DIGITAL OBJECT IDENTIFIERS
httpwwwgbiforgdataset7e380070-f762-11e1-a439-00145eb45e9a
GBIF AND DIGITAL OBJECT IDENTIFIERS
httpwwwgbiforgdataset7e380070-f762-11e1-a439-00145eb45e9a
PUBLISHING DATA FROM RESEARCH
PUBLISHING DATA FROM RESEARCH
httpwwwgbiforgdataset4bde5856-6d9f-41cd-880a-2d64eac05b0d
wwwpnasorgcgidoi101073pnas1308933111
mdash Agricultural biodiversity Chair Elizabeth Arnaud Bioversity International
mdash Distribution modelling Chair Jorge Soberon University of Kansas
Next steps
bull Task group to consult with professional communities and prepare initial recommendations by GB22
bull Continue collaboration with University of Satildeo Paulo Brazil to develop user-based fitness-for-use lsquoprofilesrsquo for GBIForg
bull Future task groups on marine amp invasive species research
ENHANCING DATA FITNESS FOR USE bull 2015-16 objective Enhance fitness of data accessed via GBIForg for key
research uses through engaging expert communities and identify gaps
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
Datamdashby GBIF participant
NOTE Datasets are assigned to countries according to the location of the publishing institution including aggregated datasets with contributors from many other countries httpwwwgbiforg | 06 MAY 2015
1 United States 2433348 6 Finland 1162279
2 United Kingdom 2366907 7 Belgium 707414
3 Australia 2260641 8 Netherlands 628524
4 Sweden 2146770 9 Norway 252036
5 Denmark 1187322 10 Brazil 110487
1 United States 209481914 6 Finland 19626137
2 Sweden 50995697 7 Germany 18792652
3 United Kingdom 49538295 8 France 17549337
4 Australia 36989101 9 Norway 17425011
5 Netherlands 21577009 10 Denmark 10238708
Number of new records publishedmdashTop 10 participant Countries (1 Jan to 30 Apr 2015)
Total number of records publishedmdashTop 10 Participant Countries (as of 30 Apr 2015)
httpwwwgbiforgnewsroomconsultationsstrategicplan
GBIF STRATEGIC PLAN 2017-2021
KIITOS PALJON
To monitor biodiversity trends we need more than just presence data
Concern ndash Prescence-only data
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-06 12 individuals 1 km Butterfly transect
Vanessa cardui PlotB-2014-06 8 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-06 3 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Vanessa cardui PlotA-2014-06 6 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-06 4 individuals 1 km Butterfly transect
Inachis io PlotA-2014-06 1 individual 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-07 15 individuals 1 km Butterfly transect
Vanessa cardui PlotB-2014-07 4 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-07 1 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-08 8 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-08 2 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Platichthys flesus DiveX-20120301 3 individuals 500 m2 Fish dive survey
Sprattus sprattus DiveX-20120301 71 individuals 500 m2 Fish dive survey
Species Event Quantity Sample size Protocol
Vanessa cardui PlotA-2014-07 3 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-07 8 individuals 1 km Butterfly transect
Thecla betulae PlotA-2014-07 2 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotA-2014-08 1 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-08 3 individuals 1 km Butterfly transect
Comparable
Not comparable
EXTENDING GBIF FOR SAMPLE-BASED DATA
SAMPLE-BASED DATA
httpwwwgbiforgpage82105
SAMPLE-BASED DATA
httpeubon-iptgbiforgresourcedor=butterflies-monitoring-scheme-il
Taxon Concept Institution Collection
Taxon Name
Publication
Species Occurrence
Sequence
GBIF Data Index
Catalogue of Life
Conceptual biodiversity data model
Published data sets
Institution Catalogue
Collection Catalogue
Taxon Concept Catalogue
Taxon Name Catalogue
Publication Catalogue
Species Occurrence Catalogue
Sequence Catalogue Comprehensive
service-centred catalogues
Species occurrence record includes scientific name and no explicit species concept
GBIF in future should use services from a shared catalogue to get the best concept (and to add it if not already included)
Catalogues with compatible services form an ecosystem to organise access to distributed biodiversity information
Catalogues are also best place of offer tools and services to support and organise annotations and corrections
GBIF AND GLOBALLY CONNECTED DATA
- Open biodiversity information international perspectives
- Slide Number 2
- Slide Number 3
- Slide Number 4
- Slide Number 5
- Slide Number 6
- Slide Number 7
- Slide Number 8
- Types of data shared through GBIF
- GBIF BY THE NUMBERS
- Data published through GBIforg
- Data publishers
- Visits to GBIForg by Country
- Data download requests by country
- Citations in peer-reviewed research
- Research examples
- GBIF and Digital Object Identifiers
- Slide Number 18
- Slide Number 19
- GBIF and digital object identifiers
- GBIF and digital object identifiers
- Publishing data from research
- Publishing data from research
- Slide Number 24
- Slide Number 25
- Slide Number 26
- Slide Number 27
- Slide Number 28
- Datamdashby GBIF participant
- Slide Number 30
- Slide Number 31
- Concern ndash Prescence-only data
- Slide Number 33
- sample-based data
- sample-based data
- Slide Number 36
-
Data published through GBIforg
httpwwwgbiforg | 6 MAY 2015
Trend in primary biodiversity records (millions)
100
150
200
250
300
350
400
450
500
550
600
Data publishers
A sharp rise in the number of data publishers in September 2013 results from institutions choosing to register as separate entities rather than sharing datasets through a single publisher at their national node institution httpwwwgbiforg | 06 MAY 2015
Trend in number of institutions registered as GBIF data publishers
200
250
300
350
400
450
500
550
600
650
700
Visits to GBIForg by Country
Google Analytics report for GBIForg April statistics skewed by errors introduced in late April and resolved in early May Access available upon request from commsgbiforg | 04 MAY 2015
1 United States 118049 6 France 5715
2 China 8083 7 United Kingdom 4984
3 Spain 6388 8 Brazil 4823
4 India 6321 9 Mexico 4577
5 Germany 6075 10 Colombia 3620
Apr 2015
Data download requests by country
Requests for download do not necessarily result in data actually being downloaded Based on country indicated by user login | 06 MAY 2015
1 Mexico 5838 6 Spain 2061
2 United States 4813 7 United Kingdom 1615
3 China 3359 8 Ecuador 1578
4 Denmark 3000 9 Colombia 1143
5 Brazil 2098 10 Germany 895
Total of
33144 requests from 3886 users in
120 countries islands and territories
1 Jan 2015 ndash 30 Apr 2015
Citations in peer-reviewed research
04 MAY 2015
Annual number of peer-reviewed publications using GBIF-mediated data
52
89
148
169
229
249
357
116
0
50
100
150
200
250
300
350
400
2008 2009 2010 2011 2012 2013 2014 2015 (Jan-Apr)
Research examples
bull Brown KA Parks KE Bethell CA et al Predicting plant diversity patterns in Madagascar understanding the effects of climate and land cover change in a biodiversity hotspot
bull Khoury CK Heider B Castantildeeda-Alvarez NP et al Distributions ex situ conservation priorities and genetic resource potential of crop wild relatives of sweet potato [Ipomoea batatas (L) Lam I series Batatas] Plant Science
bull Leach K Kelly R Cameron A Montgomery WI amp Reid N Expertly validated models and phylogenetically-controlled analysis suggests responses to climate change are related to species traits in the order Lagomorpha PLoS ONE
bull Shabani F Kumar L Nojoumian AH et al Projected future distribution of date palm and its potential use in alleviating micronutrient deficiency J Sci Food Agric
A complete archive of research citing used of GBIF can be accessed at httpwwwmendeleycomgroups1068301gbif-public-library 06 MAY 2015
Apr 2015
GBIF and Digital Object Identifiers
DOI ndash Digital Object Identifier bull Persistent resolvable identifiers bull Standard for published papers bull Simplify citing references bull Used in measuring impact
User searches for data through
GBIForg
DataCite Denmark
GBIForg GBIF assigns DOIs to
data downloads
Cleaned data
Data
Data attribution
Dataset DOI
Researcher
Paper
Paper DOI
User deposits cleaned dataset in a repository and gets
DOI for dataset
Published paper can give
resolvable links to GBIF
download andor to
cleaned dataset
User cleans data
User publishes
paper
GBIF download
Data
Data attribution
Download DOI
Download history
Download 1
GBIForg creates a download data set
GBIF AND DIGITAL OBJECT IDENTIFIERS
Researcher
GBIForg
Download history
Download 1
Cleaned data
Data
Data attribution
Dataset DOI
Paper
Paper DOI
GBIF download
Data
Data attribution
Download DOI
Data Publisher
Reader
GBIF
bull Cite data sources bull Linked results to data bull Suggest data
corrections
bull Discover data usage bull Receive suggested
data corrections
bull Monitor data usage bull Enhance fitness-for-
use
bull Retrieve source data bull Reproduce results
GBIF AND DIGITAL OBJECT IDENTIFIERS
GBIF AND DIGITAL OBJECT IDENTIFIERS
httpwwwgbiforgdataset7e380070-f762-11e1-a439-00145eb45e9a
GBIF AND DIGITAL OBJECT IDENTIFIERS
httpwwwgbiforgdataset7e380070-f762-11e1-a439-00145eb45e9a
PUBLISHING DATA FROM RESEARCH
PUBLISHING DATA FROM RESEARCH
httpwwwgbiforgdataset4bde5856-6d9f-41cd-880a-2d64eac05b0d
wwwpnasorgcgidoi101073pnas1308933111
mdash Agricultural biodiversity Chair Elizabeth Arnaud Bioversity International
mdash Distribution modelling Chair Jorge Soberon University of Kansas
Next steps
bull Task group to consult with professional communities and prepare initial recommendations by GB22
bull Continue collaboration with University of Satildeo Paulo Brazil to develop user-based fitness-for-use lsquoprofilesrsquo for GBIForg
bull Future task groups on marine amp invasive species research
ENHANCING DATA FITNESS FOR USE bull 2015-16 objective Enhance fitness of data accessed via GBIForg for key
research uses through engaging expert communities and identify gaps
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
Datamdashby GBIF participant
NOTE Datasets are assigned to countries according to the location of the publishing institution including aggregated datasets with contributors from many other countries httpwwwgbiforg | 06 MAY 2015
1 United States 2433348 6 Finland 1162279
2 United Kingdom 2366907 7 Belgium 707414
3 Australia 2260641 8 Netherlands 628524
4 Sweden 2146770 9 Norway 252036
5 Denmark 1187322 10 Brazil 110487
1 United States 209481914 6 Finland 19626137
2 Sweden 50995697 7 Germany 18792652
3 United Kingdom 49538295 8 France 17549337
4 Australia 36989101 9 Norway 17425011
5 Netherlands 21577009 10 Denmark 10238708
Number of new records publishedmdashTop 10 participant Countries (1 Jan to 30 Apr 2015)
Total number of records publishedmdashTop 10 Participant Countries (as of 30 Apr 2015)
httpwwwgbiforgnewsroomconsultationsstrategicplan
GBIF STRATEGIC PLAN 2017-2021
KIITOS PALJON
To monitor biodiversity trends we need more than just presence data
Concern ndash Prescence-only data
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-06 12 individuals 1 km Butterfly transect
Vanessa cardui PlotB-2014-06 8 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-06 3 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Vanessa cardui PlotA-2014-06 6 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-06 4 individuals 1 km Butterfly transect
Inachis io PlotA-2014-06 1 individual 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-07 15 individuals 1 km Butterfly transect
Vanessa cardui PlotB-2014-07 4 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-07 1 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-08 8 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-08 2 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Platichthys flesus DiveX-20120301 3 individuals 500 m2 Fish dive survey
Sprattus sprattus DiveX-20120301 71 individuals 500 m2 Fish dive survey
Species Event Quantity Sample size Protocol
Vanessa cardui PlotA-2014-07 3 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-07 8 individuals 1 km Butterfly transect
Thecla betulae PlotA-2014-07 2 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotA-2014-08 1 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-08 3 individuals 1 km Butterfly transect
Comparable
Not comparable
EXTENDING GBIF FOR SAMPLE-BASED DATA
SAMPLE-BASED DATA
httpwwwgbiforgpage82105
SAMPLE-BASED DATA
httpeubon-iptgbiforgresourcedor=butterflies-monitoring-scheme-il
Taxon Concept Institution Collection
Taxon Name
Publication
Species Occurrence
Sequence
GBIF Data Index
Catalogue of Life
Conceptual biodiversity data model
Published data sets
Institution Catalogue
Collection Catalogue
Taxon Concept Catalogue
Taxon Name Catalogue
Publication Catalogue
Species Occurrence Catalogue
Sequence Catalogue Comprehensive
service-centred catalogues
Species occurrence record includes scientific name and no explicit species concept
GBIF in future should use services from a shared catalogue to get the best concept (and to add it if not already included)
Catalogues with compatible services form an ecosystem to organise access to distributed biodiversity information
Catalogues are also best place of offer tools and services to support and organise annotations and corrections
GBIF AND GLOBALLY CONNECTED DATA
- Open biodiversity information international perspectives
- Slide Number 2
- Slide Number 3
- Slide Number 4
- Slide Number 5
- Slide Number 6
- Slide Number 7
- Slide Number 8
- Types of data shared through GBIF
- GBIF BY THE NUMBERS
- Data published through GBIforg
- Data publishers
- Visits to GBIForg by Country
- Data download requests by country
- Citations in peer-reviewed research
- Research examples
- GBIF and Digital Object Identifiers
- Slide Number 18
- Slide Number 19
- GBIF and digital object identifiers
- GBIF and digital object identifiers
- Publishing data from research
- Publishing data from research
- Slide Number 24
- Slide Number 25
- Slide Number 26
- Slide Number 27
- Slide Number 28
- Datamdashby GBIF participant
- Slide Number 30
- Slide Number 31
- Concern ndash Prescence-only data
- Slide Number 33
- sample-based data
- sample-based data
- Slide Number 36
-
Data publishers
A sharp rise in the number of data publishers in September 2013 results from institutions choosing to register as separate entities rather than sharing datasets through a single publisher at their national node institution httpwwwgbiforg | 06 MAY 2015
Trend in number of institutions registered as GBIF data publishers
200
250
300
350
400
450
500
550
600
650
700
Visits to GBIForg by Country
Google Analytics report for GBIForg April statistics skewed by errors introduced in late April and resolved in early May Access available upon request from commsgbiforg | 04 MAY 2015
1 United States 118049 6 France 5715
2 China 8083 7 United Kingdom 4984
3 Spain 6388 8 Brazil 4823
4 India 6321 9 Mexico 4577
5 Germany 6075 10 Colombia 3620
Apr 2015
Data download requests by country
Requests for download do not necessarily result in data actually being downloaded Based on country indicated by user login | 06 MAY 2015
1 Mexico 5838 6 Spain 2061
2 United States 4813 7 United Kingdom 1615
3 China 3359 8 Ecuador 1578
4 Denmark 3000 9 Colombia 1143
5 Brazil 2098 10 Germany 895
Total of
33144 requests from 3886 users in
120 countries islands and territories
1 Jan 2015 ndash 30 Apr 2015
Citations in peer-reviewed research
04 MAY 2015
Annual number of peer-reviewed publications using GBIF-mediated data
52
89
148
169
229
249
357
116
0
50
100
150
200
250
300
350
400
2008 2009 2010 2011 2012 2013 2014 2015 (Jan-Apr)
Research examples
bull Brown KA Parks KE Bethell CA et al Predicting plant diversity patterns in Madagascar understanding the effects of climate and land cover change in a biodiversity hotspot
bull Khoury CK Heider B Castantildeeda-Alvarez NP et al Distributions ex situ conservation priorities and genetic resource potential of crop wild relatives of sweet potato [Ipomoea batatas (L) Lam I series Batatas] Plant Science
bull Leach K Kelly R Cameron A Montgomery WI amp Reid N Expertly validated models and phylogenetically-controlled analysis suggests responses to climate change are related to species traits in the order Lagomorpha PLoS ONE
bull Shabani F Kumar L Nojoumian AH et al Projected future distribution of date palm and its potential use in alleviating micronutrient deficiency J Sci Food Agric
A complete archive of research citing used of GBIF can be accessed at httpwwwmendeleycomgroups1068301gbif-public-library 06 MAY 2015
Apr 2015
GBIF and Digital Object Identifiers
DOI ndash Digital Object Identifier bull Persistent resolvable identifiers bull Standard for published papers bull Simplify citing references bull Used in measuring impact
User searches for data through
GBIForg
DataCite Denmark
GBIForg GBIF assigns DOIs to
data downloads
Cleaned data
Data
Data attribution
Dataset DOI
Researcher
Paper
Paper DOI
User deposits cleaned dataset in a repository and gets
DOI for dataset
Published paper can give
resolvable links to GBIF
download andor to
cleaned dataset
User cleans data
User publishes
paper
GBIF download
Data
Data attribution
Download DOI
Download history
Download 1
GBIForg creates a download data set
GBIF AND DIGITAL OBJECT IDENTIFIERS
Researcher
GBIForg
Download history
Download 1
Cleaned data
Data
Data attribution
Dataset DOI
Paper
Paper DOI
GBIF download
Data
Data attribution
Download DOI
Data Publisher
Reader
GBIF
bull Cite data sources bull Linked results to data bull Suggest data
corrections
bull Discover data usage bull Receive suggested
data corrections
bull Monitor data usage bull Enhance fitness-for-
use
bull Retrieve source data bull Reproduce results
GBIF AND DIGITAL OBJECT IDENTIFIERS
GBIF AND DIGITAL OBJECT IDENTIFIERS
httpwwwgbiforgdataset7e380070-f762-11e1-a439-00145eb45e9a
GBIF AND DIGITAL OBJECT IDENTIFIERS
httpwwwgbiforgdataset7e380070-f762-11e1-a439-00145eb45e9a
PUBLISHING DATA FROM RESEARCH
PUBLISHING DATA FROM RESEARCH
httpwwwgbiforgdataset4bde5856-6d9f-41cd-880a-2d64eac05b0d
wwwpnasorgcgidoi101073pnas1308933111
mdash Agricultural biodiversity Chair Elizabeth Arnaud Bioversity International
mdash Distribution modelling Chair Jorge Soberon University of Kansas
Next steps
bull Task group to consult with professional communities and prepare initial recommendations by GB22
bull Continue collaboration with University of Satildeo Paulo Brazil to develop user-based fitness-for-use lsquoprofilesrsquo for GBIForg
bull Future task groups on marine amp invasive species research
ENHANCING DATA FITNESS FOR USE bull 2015-16 objective Enhance fitness of data accessed via GBIForg for key
research uses through engaging expert communities and identify gaps
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
Datamdashby GBIF participant
NOTE Datasets are assigned to countries according to the location of the publishing institution including aggregated datasets with contributors from many other countries httpwwwgbiforg | 06 MAY 2015
1 United States 2433348 6 Finland 1162279
2 United Kingdom 2366907 7 Belgium 707414
3 Australia 2260641 8 Netherlands 628524
4 Sweden 2146770 9 Norway 252036
5 Denmark 1187322 10 Brazil 110487
1 United States 209481914 6 Finland 19626137
2 Sweden 50995697 7 Germany 18792652
3 United Kingdom 49538295 8 France 17549337
4 Australia 36989101 9 Norway 17425011
5 Netherlands 21577009 10 Denmark 10238708
Number of new records publishedmdashTop 10 participant Countries (1 Jan to 30 Apr 2015)
Total number of records publishedmdashTop 10 Participant Countries (as of 30 Apr 2015)
httpwwwgbiforgnewsroomconsultationsstrategicplan
GBIF STRATEGIC PLAN 2017-2021
KIITOS PALJON
To monitor biodiversity trends we need more than just presence data
Concern ndash Prescence-only data
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-06 12 individuals 1 km Butterfly transect
Vanessa cardui PlotB-2014-06 8 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-06 3 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Vanessa cardui PlotA-2014-06 6 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-06 4 individuals 1 km Butterfly transect
Inachis io PlotA-2014-06 1 individual 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-07 15 individuals 1 km Butterfly transect
Vanessa cardui PlotB-2014-07 4 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-07 1 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-08 8 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-08 2 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Platichthys flesus DiveX-20120301 3 individuals 500 m2 Fish dive survey
Sprattus sprattus DiveX-20120301 71 individuals 500 m2 Fish dive survey
Species Event Quantity Sample size Protocol
Vanessa cardui PlotA-2014-07 3 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-07 8 individuals 1 km Butterfly transect
Thecla betulae PlotA-2014-07 2 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotA-2014-08 1 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-08 3 individuals 1 km Butterfly transect
Comparable
Not comparable
EXTENDING GBIF FOR SAMPLE-BASED DATA
SAMPLE-BASED DATA
httpwwwgbiforgpage82105
SAMPLE-BASED DATA
httpeubon-iptgbiforgresourcedor=butterflies-monitoring-scheme-il
Taxon Concept Institution Collection
Taxon Name
Publication
Species Occurrence
Sequence
GBIF Data Index
Catalogue of Life
Conceptual biodiversity data model
Published data sets
Institution Catalogue
Collection Catalogue
Taxon Concept Catalogue
Taxon Name Catalogue
Publication Catalogue
Species Occurrence Catalogue
Sequence Catalogue Comprehensive
service-centred catalogues
Species occurrence record includes scientific name and no explicit species concept
GBIF in future should use services from a shared catalogue to get the best concept (and to add it if not already included)
Catalogues with compatible services form an ecosystem to organise access to distributed biodiversity information
Catalogues are also best place of offer tools and services to support and organise annotations and corrections
GBIF AND GLOBALLY CONNECTED DATA
- Open biodiversity information international perspectives
- Slide Number 2
- Slide Number 3
- Slide Number 4
- Slide Number 5
- Slide Number 6
- Slide Number 7
- Slide Number 8
- Types of data shared through GBIF
- GBIF BY THE NUMBERS
- Data published through GBIforg
- Data publishers
- Visits to GBIForg by Country
- Data download requests by country
- Citations in peer-reviewed research
- Research examples
- GBIF and Digital Object Identifiers
- Slide Number 18
- Slide Number 19
- GBIF and digital object identifiers
- GBIF and digital object identifiers
- Publishing data from research
- Publishing data from research
- Slide Number 24
- Slide Number 25
- Slide Number 26
- Slide Number 27
- Slide Number 28
- Datamdashby GBIF participant
- Slide Number 30
- Slide Number 31
- Concern ndash Prescence-only data
- Slide Number 33
- sample-based data
- sample-based data
- Slide Number 36
-
Visits to GBIForg by Country
Google Analytics report for GBIForg April statistics skewed by errors introduced in late April and resolved in early May Access available upon request from commsgbiforg | 04 MAY 2015
1 United States 118049 6 France 5715
2 China 8083 7 United Kingdom 4984
3 Spain 6388 8 Brazil 4823
4 India 6321 9 Mexico 4577
5 Germany 6075 10 Colombia 3620
Apr 2015
Data download requests by country
Requests for download do not necessarily result in data actually being downloaded Based on country indicated by user login | 06 MAY 2015
1 Mexico 5838 6 Spain 2061
2 United States 4813 7 United Kingdom 1615
3 China 3359 8 Ecuador 1578
4 Denmark 3000 9 Colombia 1143
5 Brazil 2098 10 Germany 895
Total of
33144 requests from 3886 users in
120 countries islands and territories
1 Jan 2015 ndash 30 Apr 2015
Citations in peer-reviewed research
04 MAY 2015
Annual number of peer-reviewed publications using GBIF-mediated data
52
89
148
169
229
249
357
116
0
50
100
150
200
250
300
350
400
2008 2009 2010 2011 2012 2013 2014 2015 (Jan-Apr)
Research examples
bull Brown KA Parks KE Bethell CA et al Predicting plant diversity patterns in Madagascar understanding the effects of climate and land cover change in a biodiversity hotspot
bull Khoury CK Heider B Castantildeeda-Alvarez NP et al Distributions ex situ conservation priorities and genetic resource potential of crop wild relatives of sweet potato [Ipomoea batatas (L) Lam I series Batatas] Plant Science
bull Leach K Kelly R Cameron A Montgomery WI amp Reid N Expertly validated models and phylogenetically-controlled analysis suggests responses to climate change are related to species traits in the order Lagomorpha PLoS ONE
bull Shabani F Kumar L Nojoumian AH et al Projected future distribution of date palm and its potential use in alleviating micronutrient deficiency J Sci Food Agric
A complete archive of research citing used of GBIF can be accessed at httpwwwmendeleycomgroups1068301gbif-public-library 06 MAY 2015
Apr 2015
GBIF and Digital Object Identifiers
DOI ndash Digital Object Identifier bull Persistent resolvable identifiers bull Standard for published papers bull Simplify citing references bull Used in measuring impact
User searches for data through
GBIForg
DataCite Denmark
GBIForg GBIF assigns DOIs to
data downloads
Cleaned data
Data
Data attribution
Dataset DOI
Researcher
Paper
Paper DOI
User deposits cleaned dataset in a repository and gets
DOI for dataset
Published paper can give
resolvable links to GBIF
download andor to
cleaned dataset
User cleans data
User publishes
paper
GBIF download
Data
Data attribution
Download DOI
Download history
Download 1
GBIForg creates a download data set
GBIF AND DIGITAL OBJECT IDENTIFIERS
Researcher
GBIForg
Download history
Download 1
Cleaned data
Data
Data attribution
Dataset DOI
Paper
Paper DOI
GBIF download
Data
Data attribution
Download DOI
Data Publisher
Reader
GBIF
bull Cite data sources bull Linked results to data bull Suggest data
corrections
bull Discover data usage bull Receive suggested
data corrections
bull Monitor data usage bull Enhance fitness-for-
use
bull Retrieve source data bull Reproduce results
GBIF AND DIGITAL OBJECT IDENTIFIERS
GBIF AND DIGITAL OBJECT IDENTIFIERS
httpwwwgbiforgdataset7e380070-f762-11e1-a439-00145eb45e9a
GBIF AND DIGITAL OBJECT IDENTIFIERS
httpwwwgbiforgdataset7e380070-f762-11e1-a439-00145eb45e9a
PUBLISHING DATA FROM RESEARCH
PUBLISHING DATA FROM RESEARCH
httpwwwgbiforgdataset4bde5856-6d9f-41cd-880a-2d64eac05b0d
wwwpnasorgcgidoi101073pnas1308933111
mdash Agricultural biodiversity Chair Elizabeth Arnaud Bioversity International
mdash Distribution modelling Chair Jorge Soberon University of Kansas
Next steps
bull Task group to consult with professional communities and prepare initial recommendations by GB22
bull Continue collaboration with University of Satildeo Paulo Brazil to develop user-based fitness-for-use lsquoprofilesrsquo for GBIForg
bull Future task groups on marine amp invasive species research
ENHANCING DATA FITNESS FOR USE bull 2015-16 objective Enhance fitness of data accessed via GBIForg for key
research uses through engaging expert communities and identify gaps
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
Datamdashby GBIF participant
NOTE Datasets are assigned to countries according to the location of the publishing institution including aggregated datasets with contributors from many other countries httpwwwgbiforg | 06 MAY 2015
1 United States 2433348 6 Finland 1162279
2 United Kingdom 2366907 7 Belgium 707414
3 Australia 2260641 8 Netherlands 628524
4 Sweden 2146770 9 Norway 252036
5 Denmark 1187322 10 Brazil 110487
1 United States 209481914 6 Finland 19626137
2 Sweden 50995697 7 Germany 18792652
3 United Kingdom 49538295 8 France 17549337
4 Australia 36989101 9 Norway 17425011
5 Netherlands 21577009 10 Denmark 10238708
Number of new records publishedmdashTop 10 participant Countries (1 Jan to 30 Apr 2015)
Total number of records publishedmdashTop 10 Participant Countries (as of 30 Apr 2015)
httpwwwgbiforgnewsroomconsultationsstrategicplan
GBIF STRATEGIC PLAN 2017-2021
KIITOS PALJON
To monitor biodiversity trends we need more than just presence data
Concern ndash Prescence-only data
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-06 12 individuals 1 km Butterfly transect
Vanessa cardui PlotB-2014-06 8 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-06 3 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Vanessa cardui PlotA-2014-06 6 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-06 4 individuals 1 km Butterfly transect
Inachis io PlotA-2014-06 1 individual 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-07 15 individuals 1 km Butterfly transect
Vanessa cardui PlotB-2014-07 4 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-07 1 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-08 8 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-08 2 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Platichthys flesus DiveX-20120301 3 individuals 500 m2 Fish dive survey
Sprattus sprattus DiveX-20120301 71 individuals 500 m2 Fish dive survey
Species Event Quantity Sample size Protocol
Vanessa cardui PlotA-2014-07 3 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-07 8 individuals 1 km Butterfly transect
Thecla betulae PlotA-2014-07 2 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotA-2014-08 1 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-08 3 individuals 1 km Butterfly transect
Comparable
Not comparable
EXTENDING GBIF FOR SAMPLE-BASED DATA
SAMPLE-BASED DATA
httpwwwgbiforgpage82105
SAMPLE-BASED DATA
httpeubon-iptgbiforgresourcedor=butterflies-monitoring-scheme-il
Taxon Concept Institution Collection
Taxon Name
Publication
Species Occurrence
Sequence
GBIF Data Index
Catalogue of Life
Conceptual biodiversity data model
Published data sets
Institution Catalogue
Collection Catalogue
Taxon Concept Catalogue
Taxon Name Catalogue
Publication Catalogue
Species Occurrence Catalogue
Sequence Catalogue Comprehensive
service-centred catalogues
Species occurrence record includes scientific name and no explicit species concept
GBIF in future should use services from a shared catalogue to get the best concept (and to add it if not already included)
Catalogues with compatible services form an ecosystem to organise access to distributed biodiversity information
Catalogues are also best place of offer tools and services to support and organise annotations and corrections
GBIF AND GLOBALLY CONNECTED DATA
- Open biodiversity information international perspectives
- Slide Number 2
- Slide Number 3
- Slide Number 4
- Slide Number 5
- Slide Number 6
- Slide Number 7
- Slide Number 8
- Types of data shared through GBIF
- GBIF BY THE NUMBERS
- Data published through GBIforg
- Data publishers
- Visits to GBIForg by Country
- Data download requests by country
- Citations in peer-reviewed research
- Research examples
- GBIF and Digital Object Identifiers
- Slide Number 18
- Slide Number 19
- GBIF and digital object identifiers
- GBIF and digital object identifiers
- Publishing data from research
- Publishing data from research
- Slide Number 24
- Slide Number 25
- Slide Number 26
- Slide Number 27
- Slide Number 28
- Datamdashby GBIF participant
- Slide Number 30
- Slide Number 31
- Concern ndash Prescence-only data
- Slide Number 33
- sample-based data
- sample-based data
- Slide Number 36
-
Data download requests by country
Requests for download do not necessarily result in data actually being downloaded Based on country indicated by user login | 06 MAY 2015
1 Mexico 5838 6 Spain 2061
2 United States 4813 7 United Kingdom 1615
3 China 3359 8 Ecuador 1578
4 Denmark 3000 9 Colombia 1143
5 Brazil 2098 10 Germany 895
Total of
33144 requests from 3886 users in
120 countries islands and territories
1 Jan 2015 ndash 30 Apr 2015
Citations in peer-reviewed research
04 MAY 2015
Annual number of peer-reviewed publications using GBIF-mediated data
52
89
148
169
229
249
357
116
0
50
100
150
200
250
300
350
400
2008 2009 2010 2011 2012 2013 2014 2015 (Jan-Apr)
Research examples
bull Brown KA Parks KE Bethell CA et al Predicting plant diversity patterns in Madagascar understanding the effects of climate and land cover change in a biodiversity hotspot
bull Khoury CK Heider B Castantildeeda-Alvarez NP et al Distributions ex situ conservation priorities and genetic resource potential of crop wild relatives of sweet potato [Ipomoea batatas (L) Lam I series Batatas] Plant Science
bull Leach K Kelly R Cameron A Montgomery WI amp Reid N Expertly validated models and phylogenetically-controlled analysis suggests responses to climate change are related to species traits in the order Lagomorpha PLoS ONE
bull Shabani F Kumar L Nojoumian AH et al Projected future distribution of date palm and its potential use in alleviating micronutrient deficiency J Sci Food Agric
A complete archive of research citing used of GBIF can be accessed at httpwwwmendeleycomgroups1068301gbif-public-library 06 MAY 2015
Apr 2015
GBIF and Digital Object Identifiers
DOI ndash Digital Object Identifier bull Persistent resolvable identifiers bull Standard for published papers bull Simplify citing references bull Used in measuring impact
User searches for data through
GBIForg
DataCite Denmark
GBIForg GBIF assigns DOIs to
data downloads
Cleaned data
Data
Data attribution
Dataset DOI
Researcher
Paper
Paper DOI
User deposits cleaned dataset in a repository and gets
DOI for dataset
Published paper can give
resolvable links to GBIF
download andor to
cleaned dataset
User cleans data
User publishes
paper
GBIF download
Data
Data attribution
Download DOI
Download history
Download 1
GBIForg creates a download data set
GBIF AND DIGITAL OBJECT IDENTIFIERS
Researcher
GBIForg
Download history
Download 1
Cleaned data
Data
Data attribution
Dataset DOI
Paper
Paper DOI
GBIF download
Data
Data attribution
Download DOI
Data Publisher
Reader
GBIF
bull Cite data sources bull Linked results to data bull Suggest data
corrections
bull Discover data usage bull Receive suggested
data corrections
bull Monitor data usage bull Enhance fitness-for-
use
bull Retrieve source data bull Reproduce results
GBIF AND DIGITAL OBJECT IDENTIFIERS
GBIF AND DIGITAL OBJECT IDENTIFIERS
httpwwwgbiforgdataset7e380070-f762-11e1-a439-00145eb45e9a
GBIF AND DIGITAL OBJECT IDENTIFIERS
httpwwwgbiforgdataset7e380070-f762-11e1-a439-00145eb45e9a
PUBLISHING DATA FROM RESEARCH
PUBLISHING DATA FROM RESEARCH
httpwwwgbiforgdataset4bde5856-6d9f-41cd-880a-2d64eac05b0d
wwwpnasorgcgidoi101073pnas1308933111
mdash Agricultural biodiversity Chair Elizabeth Arnaud Bioversity International
mdash Distribution modelling Chair Jorge Soberon University of Kansas
Next steps
bull Task group to consult with professional communities and prepare initial recommendations by GB22
bull Continue collaboration with University of Satildeo Paulo Brazil to develop user-based fitness-for-use lsquoprofilesrsquo for GBIForg
bull Future task groups on marine amp invasive species research
ENHANCING DATA FITNESS FOR USE bull 2015-16 objective Enhance fitness of data accessed via GBIForg for key
research uses through engaging expert communities and identify gaps
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
Datamdashby GBIF participant
NOTE Datasets are assigned to countries according to the location of the publishing institution including aggregated datasets with contributors from many other countries httpwwwgbiforg | 06 MAY 2015
1 United States 2433348 6 Finland 1162279
2 United Kingdom 2366907 7 Belgium 707414
3 Australia 2260641 8 Netherlands 628524
4 Sweden 2146770 9 Norway 252036
5 Denmark 1187322 10 Brazil 110487
1 United States 209481914 6 Finland 19626137
2 Sweden 50995697 7 Germany 18792652
3 United Kingdom 49538295 8 France 17549337
4 Australia 36989101 9 Norway 17425011
5 Netherlands 21577009 10 Denmark 10238708
Number of new records publishedmdashTop 10 participant Countries (1 Jan to 30 Apr 2015)
Total number of records publishedmdashTop 10 Participant Countries (as of 30 Apr 2015)
httpwwwgbiforgnewsroomconsultationsstrategicplan
GBIF STRATEGIC PLAN 2017-2021
KIITOS PALJON
To monitor biodiversity trends we need more than just presence data
Concern ndash Prescence-only data
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-06 12 individuals 1 km Butterfly transect
Vanessa cardui PlotB-2014-06 8 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-06 3 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Vanessa cardui PlotA-2014-06 6 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-06 4 individuals 1 km Butterfly transect
Inachis io PlotA-2014-06 1 individual 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-07 15 individuals 1 km Butterfly transect
Vanessa cardui PlotB-2014-07 4 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-07 1 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-08 8 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-08 2 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Platichthys flesus DiveX-20120301 3 individuals 500 m2 Fish dive survey
Sprattus sprattus DiveX-20120301 71 individuals 500 m2 Fish dive survey
Species Event Quantity Sample size Protocol
Vanessa cardui PlotA-2014-07 3 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-07 8 individuals 1 km Butterfly transect
Thecla betulae PlotA-2014-07 2 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotA-2014-08 1 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-08 3 individuals 1 km Butterfly transect
Comparable
Not comparable
EXTENDING GBIF FOR SAMPLE-BASED DATA
SAMPLE-BASED DATA
httpwwwgbiforgpage82105
SAMPLE-BASED DATA
httpeubon-iptgbiforgresourcedor=butterflies-monitoring-scheme-il
Taxon Concept Institution Collection
Taxon Name
Publication
Species Occurrence
Sequence
GBIF Data Index
Catalogue of Life
Conceptual biodiversity data model
Published data sets
Institution Catalogue
Collection Catalogue
Taxon Concept Catalogue
Taxon Name Catalogue
Publication Catalogue
Species Occurrence Catalogue
Sequence Catalogue Comprehensive
service-centred catalogues
Species occurrence record includes scientific name and no explicit species concept
GBIF in future should use services from a shared catalogue to get the best concept (and to add it if not already included)
Catalogues with compatible services form an ecosystem to organise access to distributed biodiversity information
Catalogues are also best place of offer tools and services to support and organise annotations and corrections
GBIF AND GLOBALLY CONNECTED DATA
- Open biodiversity information international perspectives
- Slide Number 2
- Slide Number 3
- Slide Number 4
- Slide Number 5
- Slide Number 6
- Slide Number 7
- Slide Number 8
- Types of data shared through GBIF
- GBIF BY THE NUMBERS
- Data published through GBIforg
- Data publishers
- Visits to GBIForg by Country
- Data download requests by country
- Citations in peer-reviewed research
- Research examples
- GBIF and Digital Object Identifiers
- Slide Number 18
- Slide Number 19
- GBIF and digital object identifiers
- GBIF and digital object identifiers
- Publishing data from research
- Publishing data from research
- Slide Number 24
- Slide Number 25
- Slide Number 26
- Slide Number 27
- Slide Number 28
- Datamdashby GBIF participant
- Slide Number 30
- Slide Number 31
- Concern ndash Prescence-only data
- Slide Number 33
- sample-based data
- sample-based data
- Slide Number 36
-
Citations in peer-reviewed research
04 MAY 2015
Annual number of peer-reviewed publications using GBIF-mediated data
52
89
148
169
229
249
357
116
0
50
100
150
200
250
300
350
400
2008 2009 2010 2011 2012 2013 2014 2015 (Jan-Apr)
Research examples
bull Brown KA Parks KE Bethell CA et al Predicting plant diversity patterns in Madagascar understanding the effects of climate and land cover change in a biodiversity hotspot
bull Khoury CK Heider B Castantildeeda-Alvarez NP et al Distributions ex situ conservation priorities and genetic resource potential of crop wild relatives of sweet potato [Ipomoea batatas (L) Lam I series Batatas] Plant Science
bull Leach K Kelly R Cameron A Montgomery WI amp Reid N Expertly validated models and phylogenetically-controlled analysis suggests responses to climate change are related to species traits in the order Lagomorpha PLoS ONE
bull Shabani F Kumar L Nojoumian AH et al Projected future distribution of date palm and its potential use in alleviating micronutrient deficiency J Sci Food Agric
A complete archive of research citing used of GBIF can be accessed at httpwwwmendeleycomgroups1068301gbif-public-library 06 MAY 2015
Apr 2015
GBIF and Digital Object Identifiers
DOI ndash Digital Object Identifier bull Persistent resolvable identifiers bull Standard for published papers bull Simplify citing references bull Used in measuring impact
User searches for data through
GBIForg
DataCite Denmark
GBIForg GBIF assigns DOIs to
data downloads
Cleaned data
Data
Data attribution
Dataset DOI
Researcher
Paper
Paper DOI
User deposits cleaned dataset in a repository and gets
DOI for dataset
Published paper can give
resolvable links to GBIF
download andor to
cleaned dataset
User cleans data
User publishes
paper
GBIF download
Data
Data attribution
Download DOI
Download history
Download 1
GBIForg creates a download data set
GBIF AND DIGITAL OBJECT IDENTIFIERS
Researcher
GBIForg
Download history
Download 1
Cleaned data
Data
Data attribution
Dataset DOI
Paper
Paper DOI
GBIF download
Data
Data attribution
Download DOI
Data Publisher
Reader
GBIF
bull Cite data sources bull Linked results to data bull Suggest data
corrections
bull Discover data usage bull Receive suggested
data corrections
bull Monitor data usage bull Enhance fitness-for-
use
bull Retrieve source data bull Reproduce results
GBIF AND DIGITAL OBJECT IDENTIFIERS
GBIF AND DIGITAL OBJECT IDENTIFIERS
httpwwwgbiforgdataset7e380070-f762-11e1-a439-00145eb45e9a
GBIF AND DIGITAL OBJECT IDENTIFIERS
httpwwwgbiforgdataset7e380070-f762-11e1-a439-00145eb45e9a
PUBLISHING DATA FROM RESEARCH
PUBLISHING DATA FROM RESEARCH
httpwwwgbiforgdataset4bde5856-6d9f-41cd-880a-2d64eac05b0d
wwwpnasorgcgidoi101073pnas1308933111
mdash Agricultural biodiversity Chair Elizabeth Arnaud Bioversity International
mdash Distribution modelling Chair Jorge Soberon University of Kansas
Next steps
bull Task group to consult with professional communities and prepare initial recommendations by GB22
bull Continue collaboration with University of Satildeo Paulo Brazil to develop user-based fitness-for-use lsquoprofilesrsquo for GBIForg
bull Future task groups on marine amp invasive species research
ENHANCING DATA FITNESS FOR USE bull 2015-16 objective Enhance fitness of data accessed via GBIForg for key
research uses through engaging expert communities and identify gaps
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
Datamdashby GBIF participant
NOTE Datasets are assigned to countries according to the location of the publishing institution including aggregated datasets with contributors from many other countries httpwwwgbiforg | 06 MAY 2015
1 United States 2433348 6 Finland 1162279
2 United Kingdom 2366907 7 Belgium 707414
3 Australia 2260641 8 Netherlands 628524
4 Sweden 2146770 9 Norway 252036
5 Denmark 1187322 10 Brazil 110487
1 United States 209481914 6 Finland 19626137
2 Sweden 50995697 7 Germany 18792652
3 United Kingdom 49538295 8 France 17549337
4 Australia 36989101 9 Norway 17425011
5 Netherlands 21577009 10 Denmark 10238708
Number of new records publishedmdashTop 10 participant Countries (1 Jan to 30 Apr 2015)
Total number of records publishedmdashTop 10 Participant Countries (as of 30 Apr 2015)
httpwwwgbiforgnewsroomconsultationsstrategicplan
GBIF STRATEGIC PLAN 2017-2021
KIITOS PALJON
To monitor biodiversity trends we need more than just presence data
Concern ndash Prescence-only data
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-06 12 individuals 1 km Butterfly transect
Vanessa cardui PlotB-2014-06 8 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-06 3 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Vanessa cardui PlotA-2014-06 6 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-06 4 individuals 1 km Butterfly transect
Inachis io PlotA-2014-06 1 individual 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-07 15 individuals 1 km Butterfly transect
Vanessa cardui PlotB-2014-07 4 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-07 1 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-08 8 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-08 2 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Platichthys flesus DiveX-20120301 3 individuals 500 m2 Fish dive survey
Sprattus sprattus DiveX-20120301 71 individuals 500 m2 Fish dive survey
Species Event Quantity Sample size Protocol
Vanessa cardui PlotA-2014-07 3 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-07 8 individuals 1 km Butterfly transect
Thecla betulae PlotA-2014-07 2 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotA-2014-08 1 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-08 3 individuals 1 km Butterfly transect
Comparable
Not comparable
EXTENDING GBIF FOR SAMPLE-BASED DATA
SAMPLE-BASED DATA
httpwwwgbiforgpage82105
SAMPLE-BASED DATA
httpeubon-iptgbiforgresourcedor=butterflies-monitoring-scheme-il
Taxon Concept Institution Collection
Taxon Name
Publication
Species Occurrence
Sequence
GBIF Data Index
Catalogue of Life
Conceptual biodiversity data model
Published data sets
Institution Catalogue
Collection Catalogue
Taxon Concept Catalogue
Taxon Name Catalogue
Publication Catalogue
Species Occurrence Catalogue
Sequence Catalogue Comprehensive
service-centred catalogues
Species occurrence record includes scientific name and no explicit species concept
GBIF in future should use services from a shared catalogue to get the best concept (and to add it if not already included)
Catalogues with compatible services form an ecosystem to organise access to distributed biodiversity information
Catalogues are also best place of offer tools and services to support and organise annotations and corrections
GBIF AND GLOBALLY CONNECTED DATA
- Open biodiversity information international perspectives
- Slide Number 2
- Slide Number 3
- Slide Number 4
- Slide Number 5
- Slide Number 6
- Slide Number 7
- Slide Number 8
- Types of data shared through GBIF
- GBIF BY THE NUMBERS
- Data published through GBIforg
- Data publishers
- Visits to GBIForg by Country
- Data download requests by country
- Citations in peer-reviewed research
- Research examples
- GBIF and Digital Object Identifiers
- Slide Number 18
- Slide Number 19
- GBIF and digital object identifiers
- GBIF and digital object identifiers
- Publishing data from research
- Publishing data from research
- Slide Number 24
- Slide Number 25
- Slide Number 26
- Slide Number 27
- Slide Number 28
- Datamdashby GBIF participant
- Slide Number 30
- Slide Number 31
- Concern ndash Prescence-only data
- Slide Number 33
- sample-based data
- sample-based data
- Slide Number 36
-
Research examples
bull Brown KA Parks KE Bethell CA et al Predicting plant diversity patterns in Madagascar understanding the effects of climate and land cover change in a biodiversity hotspot
bull Khoury CK Heider B Castantildeeda-Alvarez NP et al Distributions ex situ conservation priorities and genetic resource potential of crop wild relatives of sweet potato [Ipomoea batatas (L) Lam I series Batatas] Plant Science
bull Leach K Kelly R Cameron A Montgomery WI amp Reid N Expertly validated models and phylogenetically-controlled analysis suggests responses to climate change are related to species traits in the order Lagomorpha PLoS ONE
bull Shabani F Kumar L Nojoumian AH et al Projected future distribution of date palm and its potential use in alleviating micronutrient deficiency J Sci Food Agric
A complete archive of research citing used of GBIF can be accessed at httpwwwmendeleycomgroups1068301gbif-public-library 06 MAY 2015
Apr 2015
GBIF and Digital Object Identifiers
DOI ndash Digital Object Identifier bull Persistent resolvable identifiers bull Standard for published papers bull Simplify citing references bull Used in measuring impact
User searches for data through
GBIForg
DataCite Denmark
GBIForg GBIF assigns DOIs to
data downloads
Cleaned data
Data
Data attribution
Dataset DOI
Researcher
Paper
Paper DOI
User deposits cleaned dataset in a repository and gets
DOI for dataset
Published paper can give
resolvable links to GBIF
download andor to
cleaned dataset
User cleans data
User publishes
paper
GBIF download
Data
Data attribution
Download DOI
Download history
Download 1
GBIForg creates a download data set
GBIF AND DIGITAL OBJECT IDENTIFIERS
Researcher
GBIForg
Download history
Download 1
Cleaned data
Data
Data attribution
Dataset DOI
Paper
Paper DOI
GBIF download
Data
Data attribution
Download DOI
Data Publisher
Reader
GBIF
bull Cite data sources bull Linked results to data bull Suggest data
corrections
bull Discover data usage bull Receive suggested
data corrections
bull Monitor data usage bull Enhance fitness-for-
use
bull Retrieve source data bull Reproduce results
GBIF AND DIGITAL OBJECT IDENTIFIERS
GBIF AND DIGITAL OBJECT IDENTIFIERS
httpwwwgbiforgdataset7e380070-f762-11e1-a439-00145eb45e9a
GBIF AND DIGITAL OBJECT IDENTIFIERS
httpwwwgbiforgdataset7e380070-f762-11e1-a439-00145eb45e9a
PUBLISHING DATA FROM RESEARCH
PUBLISHING DATA FROM RESEARCH
httpwwwgbiforgdataset4bde5856-6d9f-41cd-880a-2d64eac05b0d
wwwpnasorgcgidoi101073pnas1308933111
mdash Agricultural biodiversity Chair Elizabeth Arnaud Bioversity International
mdash Distribution modelling Chair Jorge Soberon University of Kansas
Next steps
bull Task group to consult with professional communities and prepare initial recommendations by GB22
bull Continue collaboration with University of Satildeo Paulo Brazil to develop user-based fitness-for-use lsquoprofilesrsquo for GBIForg
bull Future task groups on marine amp invasive species research
ENHANCING DATA FITNESS FOR USE bull 2015-16 objective Enhance fitness of data accessed via GBIForg for key
research uses through engaging expert communities and identify gaps
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
Datamdashby GBIF participant
NOTE Datasets are assigned to countries according to the location of the publishing institution including aggregated datasets with contributors from many other countries httpwwwgbiforg | 06 MAY 2015
1 United States 2433348 6 Finland 1162279
2 United Kingdom 2366907 7 Belgium 707414
3 Australia 2260641 8 Netherlands 628524
4 Sweden 2146770 9 Norway 252036
5 Denmark 1187322 10 Brazil 110487
1 United States 209481914 6 Finland 19626137
2 Sweden 50995697 7 Germany 18792652
3 United Kingdom 49538295 8 France 17549337
4 Australia 36989101 9 Norway 17425011
5 Netherlands 21577009 10 Denmark 10238708
Number of new records publishedmdashTop 10 participant Countries (1 Jan to 30 Apr 2015)
Total number of records publishedmdashTop 10 Participant Countries (as of 30 Apr 2015)
httpwwwgbiforgnewsroomconsultationsstrategicplan
GBIF STRATEGIC PLAN 2017-2021
KIITOS PALJON
To monitor biodiversity trends we need more than just presence data
Concern ndash Prescence-only data
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-06 12 individuals 1 km Butterfly transect
Vanessa cardui PlotB-2014-06 8 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-06 3 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Vanessa cardui PlotA-2014-06 6 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-06 4 individuals 1 km Butterfly transect
Inachis io PlotA-2014-06 1 individual 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-07 15 individuals 1 km Butterfly transect
Vanessa cardui PlotB-2014-07 4 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-07 1 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-08 8 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-08 2 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Platichthys flesus DiveX-20120301 3 individuals 500 m2 Fish dive survey
Sprattus sprattus DiveX-20120301 71 individuals 500 m2 Fish dive survey
Species Event Quantity Sample size Protocol
Vanessa cardui PlotA-2014-07 3 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-07 8 individuals 1 km Butterfly transect
Thecla betulae PlotA-2014-07 2 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotA-2014-08 1 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-08 3 individuals 1 km Butterfly transect
Comparable
Not comparable
EXTENDING GBIF FOR SAMPLE-BASED DATA
SAMPLE-BASED DATA
httpwwwgbiforgpage82105
SAMPLE-BASED DATA
httpeubon-iptgbiforgresourcedor=butterflies-monitoring-scheme-il
Taxon Concept Institution Collection
Taxon Name
Publication
Species Occurrence
Sequence
GBIF Data Index
Catalogue of Life
Conceptual biodiversity data model
Published data sets
Institution Catalogue
Collection Catalogue
Taxon Concept Catalogue
Taxon Name Catalogue
Publication Catalogue
Species Occurrence Catalogue
Sequence Catalogue Comprehensive
service-centred catalogues
Species occurrence record includes scientific name and no explicit species concept
GBIF in future should use services from a shared catalogue to get the best concept (and to add it if not already included)
Catalogues with compatible services form an ecosystem to organise access to distributed biodiversity information
Catalogues are also best place of offer tools and services to support and organise annotations and corrections
GBIF AND GLOBALLY CONNECTED DATA
- Open biodiversity information international perspectives
- Slide Number 2
- Slide Number 3
- Slide Number 4
- Slide Number 5
- Slide Number 6
- Slide Number 7
- Slide Number 8
- Types of data shared through GBIF
- GBIF BY THE NUMBERS
- Data published through GBIforg
- Data publishers
- Visits to GBIForg by Country
- Data download requests by country
- Citations in peer-reviewed research
- Research examples
- GBIF and Digital Object Identifiers
- Slide Number 18
- Slide Number 19
- GBIF and digital object identifiers
- GBIF and digital object identifiers
- Publishing data from research
- Publishing data from research
- Slide Number 24
- Slide Number 25
- Slide Number 26
- Slide Number 27
- Slide Number 28
- Datamdashby GBIF participant
- Slide Number 30
- Slide Number 31
- Concern ndash Prescence-only data
- Slide Number 33
- sample-based data
- sample-based data
- Slide Number 36
-
GBIF and Digital Object Identifiers
DOI ndash Digital Object Identifier bull Persistent resolvable identifiers bull Standard for published papers bull Simplify citing references bull Used in measuring impact
User searches for data through
GBIForg
DataCite Denmark
GBIForg GBIF assigns DOIs to
data downloads
Cleaned data
Data
Data attribution
Dataset DOI
Researcher
Paper
Paper DOI
User deposits cleaned dataset in a repository and gets
DOI for dataset
Published paper can give
resolvable links to GBIF
download andor to
cleaned dataset
User cleans data
User publishes
paper
GBIF download
Data
Data attribution
Download DOI
Download history
Download 1
GBIForg creates a download data set
GBIF AND DIGITAL OBJECT IDENTIFIERS
Researcher
GBIForg
Download history
Download 1
Cleaned data
Data
Data attribution
Dataset DOI
Paper
Paper DOI
GBIF download
Data
Data attribution
Download DOI
Data Publisher
Reader
GBIF
bull Cite data sources bull Linked results to data bull Suggest data
corrections
bull Discover data usage bull Receive suggested
data corrections
bull Monitor data usage bull Enhance fitness-for-
use
bull Retrieve source data bull Reproduce results
GBIF AND DIGITAL OBJECT IDENTIFIERS
GBIF AND DIGITAL OBJECT IDENTIFIERS
httpwwwgbiforgdataset7e380070-f762-11e1-a439-00145eb45e9a
GBIF AND DIGITAL OBJECT IDENTIFIERS
httpwwwgbiforgdataset7e380070-f762-11e1-a439-00145eb45e9a
PUBLISHING DATA FROM RESEARCH
PUBLISHING DATA FROM RESEARCH
httpwwwgbiforgdataset4bde5856-6d9f-41cd-880a-2d64eac05b0d
wwwpnasorgcgidoi101073pnas1308933111
mdash Agricultural biodiversity Chair Elizabeth Arnaud Bioversity International
mdash Distribution modelling Chair Jorge Soberon University of Kansas
Next steps
bull Task group to consult with professional communities and prepare initial recommendations by GB22
bull Continue collaboration with University of Satildeo Paulo Brazil to develop user-based fitness-for-use lsquoprofilesrsquo for GBIForg
bull Future task groups on marine amp invasive species research
ENHANCING DATA FITNESS FOR USE bull 2015-16 objective Enhance fitness of data accessed via GBIForg for key
research uses through engaging expert communities and identify gaps
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
Datamdashby GBIF participant
NOTE Datasets are assigned to countries according to the location of the publishing institution including aggregated datasets with contributors from many other countries httpwwwgbiforg | 06 MAY 2015
1 United States 2433348 6 Finland 1162279
2 United Kingdom 2366907 7 Belgium 707414
3 Australia 2260641 8 Netherlands 628524
4 Sweden 2146770 9 Norway 252036
5 Denmark 1187322 10 Brazil 110487
1 United States 209481914 6 Finland 19626137
2 Sweden 50995697 7 Germany 18792652
3 United Kingdom 49538295 8 France 17549337
4 Australia 36989101 9 Norway 17425011
5 Netherlands 21577009 10 Denmark 10238708
Number of new records publishedmdashTop 10 participant Countries (1 Jan to 30 Apr 2015)
Total number of records publishedmdashTop 10 Participant Countries (as of 30 Apr 2015)
httpwwwgbiforgnewsroomconsultationsstrategicplan
GBIF STRATEGIC PLAN 2017-2021
KIITOS PALJON
To monitor biodiversity trends we need more than just presence data
Concern ndash Prescence-only data
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-06 12 individuals 1 km Butterfly transect
Vanessa cardui PlotB-2014-06 8 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-06 3 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Vanessa cardui PlotA-2014-06 6 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-06 4 individuals 1 km Butterfly transect
Inachis io PlotA-2014-06 1 individual 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-07 15 individuals 1 km Butterfly transect
Vanessa cardui PlotB-2014-07 4 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-07 1 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-08 8 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-08 2 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Platichthys flesus DiveX-20120301 3 individuals 500 m2 Fish dive survey
Sprattus sprattus DiveX-20120301 71 individuals 500 m2 Fish dive survey
Species Event Quantity Sample size Protocol
Vanessa cardui PlotA-2014-07 3 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-07 8 individuals 1 km Butterfly transect
Thecla betulae PlotA-2014-07 2 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotA-2014-08 1 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-08 3 individuals 1 km Butterfly transect
Comparable
Not comparable
EXTENDING GBIF FOR SAMPLE-BASED DATA
SAMPLE-BASED DATA
httpwwwgbiforgpage82105
SAMPLE-BASED DATA
httpeubon-iptgbiforgresourcedor=butterflies-monitoring-scheme-il
Taxon Concept Institution Collection
Taxon Name
Publication
Species Occurrence
Sequence
GBIF Data Index
Catalogue of Life
Conceptual biodiversity data model
Published data sets
Institution Catalogue
Collection Catalogue
Taxon Concept Catalogue
Taxon Name Catalogue
Publication Catalogue
Species Occurrence Catalogue
Sequence Catalogue Comprehensive
service-centred catalogues
Species occurrence record includes scientific name and no explicit species concept
GBIF in future should use services from a shared catalogue to get the best concept (and to add it if not already included)
Catalogues with compatible services form an ecosystem to organise access to distributed biodiversity information
Catalogues are also best place of offer tools and services to support and organise annotations and corrections
GBIF AND GLOBALLY CONNECTED DATA
- Open biodiversity information international perspectives
- Slide Number 2
- Slide Number 3
- Slide Number 4
- Slide Number 5
- Slide Number 6
- Slide Number 7
- Slide Number 8
- Types of data shared through GBIF
- GBIF BY THE NUMBERS
- Data published through GBIforg
- Data publishers
- Visits to GBIForg by Country
- Data download requests by country
- Citations in peer-reviewed research
- Research examples
- GBIF and Digital Object Identifiers
- Slide Number 18
- Slide Number 19
- GBIF and digital object identifiers
- GBIF and digital object identifiers
- Publishing data from research
- Publishing data from research
- Slide Number 24
- Slide Number 25
- Slide Number 26
- Slide Number 27
- Slide Number 28
- Datamdashby GBIF participant
- Slide Number 30
- Slide Number 31
- Concern ndash Prescence-only data
- Slide Number 33
- sample-based data
- sample-based data
- Slide Number 36
-
User searches for data through
GBIForg
DataCite Denmark
GBIForg GBIF assigns DOIs to
data downloads
Cleaned data
Data
Data attribution
Dataset DOI
Researcher
Paper
Paper DOI
User deposits cleaned dataset in a repository and gets
DOI for dataset
Published paper can give
resolvable links to GBIF
download andor to
cleaned dataset
User cleans data
User publishes
paper
GBIF download
Data
Data attribution
Download DOI
Download history
Download 1
GBIForg creates a download data set
GBIF AND DIGITAL OBJECT IDENTIFIERS
Researcher
GBIForg
Download history
Download 1
Cleaned data
Data
Data attribution
Dataset DOI
Paper
Paper DOI
GBIF download
Data
Data attribution
Download DOI
Data Publisher
Reader
GBIF
bull Cite data sources bull Linked results to data bull Suggest data
corrections
bull Discover data usage bull Receive suggested
data corrections
bull Monitor data usage bull Enhance fitness-for-
use
bull Retrieve source data bull Reproduce results
GBIF AND DIGITAL OBJECT IDENTIFIERS
GBIF AND DIGITAL OBJECT IDENTIFIERS
httpwwwgbiforgdataset7e380070-f762-11e1-a439-00145eb45e9a
GBIF AND DIGITAL OBJECT IDENTIFIERS
httpwwwgbiforgdataset7e380070-f762-11e1-a439-00145eb45e9a
PUBLISHING DATA FROM RESEARCH
PUBLISHING DATA FROM RESEARCH
httpwwwgbiforgdataset4bde5856-6d9f-41cd-880a-2d64eac05b0d
wwwpnasorgcgidoi101073pnas1308933111
mdash Agricultural biodiversity Chair Elizabeth Arnaud Bioversity International
mdash Distribution modelling Chair Jorge Soberon University of Kansas
Next steps
bull Task group to consult with professional communities and prepare initial recommendations by GB22
bull Continue collaboration with University of Satildeo Paulo Brazil to develop user-based fitness-for-use lsquoprofilesrsquo for GBIForg
bull Future task groups on marine amp invasive species research
ENHANCING DATA FITNESS FOR USE bull 2015-16 objective Enhance fitness of data accessed via GBIForg for key
research uses through engaging expert communities and identify gaps
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
Datamdashby GBIF participant
NOTE Datasets are assigned to countries according to the location of the publishing institution including aggregated datasets with contributors from many other countries httpwwwgbiforg | 06 MAY 2015
1 United States 2433348 6 Finland 1162279
2 United Kingdom 2366907 7 Belgium 707414
3 Australia 2260641 8 Netherlands 628524
4 Sweden 2146770 9 Norway 252036
5 Denmark 1187322 10 Brazil 110487
1 United States 209481914 6 Finland 19626137
2 Sweden 50995697 7 Germany 18792652
3 United Kingdom 49538295 8 France 17549337
4 Australia 36989101 9 Norway 17425011
5 Netherlands 21577009 10 Denmark 10238708
Number of new records publishedmdashTop 10 participant Countries (1 Jan to 30 Apr 2015)
Total number of records publishedmdashTop 10 Participant Countries (as of 30 Apr 2015)
httpwwwgbiforgnewsroomconsultationsstrategicplan
GBIF STRATEGIC PLAN 2017-2021
KIITOS PALJON
To monitor biodiversity trends we need more than just presence data
Concern ndash Prescence-only data
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-06 12 individuals 1 km Butterfly transect
Vanessa cardui PlotB-2014-06 8 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-06 3 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Vanessa cardui PlotA-2014-06 6 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-06 4 individuals 1 km Butterfly transect
Inachis io PlotA-2014-06 1 individual 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-07 15 individuals 1 km Butterfly transect
Vanessa cardui PlotB-2014-07 4 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-07 1 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-08 8 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-08 2 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Platichthys flesus DiveX-20120301 3 individuals 500 m2 Fish dive survey
Sprattus sprattus DiveX-20120301 71 individuals 500 m2 Fish dive survey
Species Event Quantity Sample size Protocol
Vanessa cardui PlotA-2014-07 3 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-07 8 individuals 1 km Butterfly transect
Thecla betulae PlotA-2014-07 2 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotA-2014-08 1 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-08 3 individuals 1 km Butterfly transect
Comparable
Not comparable
EXTENDING GBIF FOR SAMPLE-BASED DATA
SAMPLE-BASED DATA
httpwwwgbiforgpage82105
SAMPLE-BASED DATA
httpeubon-iptgbiforgresourcedor=butterflies-monitoring-scheme-il
Taxon Concept Institution Collection
Taxon Name
Publication
Species Occurrence
Sequence
GBIF Data Index
Catalogue of Life
Conceptual biodiversity data model
Published data sets
Institution Catalogue
Collection Catalogue
Taxon Concept Catalogue
Taxon Name Catalogue
Publication Catalogue
Species Occurrence Catalogue
Sequence Catalogue Comprehensive
service-centred catalogues
Species occurrence record includes scientific name and no explicit species concept
GBIF in future should use services from a shared catalogue to get the best concept (and to add it if not already included)
Catalogues with compatible services form an ecosystem to organise access to distributed biodiversity information
Catalogues are also best place of offer tools and services to support and organise annotations and corrections
GBIF AND GLOBALLY CONNECTED DATA
- Open biodiversity information international perspectives
- Slide Number 2
- Slide Number 3
- Slide Number 4
- Slide Number 5
- Slide Number 6
- Slide Number 7
- Slide Number 8
- Types of data shared through GBIF
- GBIF BY THE NUMBERS
- Data published through GBIforg
- Data publishers
- Visits to GBIForg by Country
- Data download requests by country
- Citations in peer-reviewed research
- Research examples
- GBIF and Digital Object Identifiers
- Slide Number 18
- Slide Number 19
- GBIF and digital object identifiers
- GBIF and digital object identifiers
- Publishing data from research
- Publishing data from research
- Slide Number 24
- Slide Number 25
- Slide Number 26
- Slide Number 27
- Slide Number 28
- Datamdashby GBIF participant
- Slide Number 30
- Slide Number 31
- Concern ndash Prescence-only data
- Slide Number 33
- sample-based data
- sample-based data
- Slide Number 36
-
Researcher
GBIForg
Download history
Download 1
Cleaned data
Data
Data attribution
Dataset DOI
Paper
Paper DOI
GBIF download
Data
Data attribution
Download DOI
Data Publisher
Reader
GBIF
bull Cite data sources bull Linked results to data bull Suggest data
corrections
bull Discover data usage bull Receive suggested
data corrections
bull Monitor data usage bull Enhance fitness-for-
use
bull Retrieve source data bull Reproduce results
GBIF AND DIGITAL OBJECT IDENTIFIERS
GBIF AND DIGITAL OBJECT IDENTIFIERS
httpwwwgbiforgdataset7e380070-f762-11e1-a439-00145eb45e9a
GBIF AND DIGITAL OBJECT IDENTIFIERS
httpwwwgbiforgdataset7e380070-f762-11e1-a439-00145eb45e9a
PUBLISHING DATA FROM RESEARCH
PUBLISHING DATA FROM RESEARCH
httpwwwgbiforgdataset4bde5856-6d9f-41cd-880a-2d64eac05b0d
wwwpnasorgcgidoi101073pnas1308933111
mdash Agricultural biodiversity Chair Elizabeth Arnaud Bioversity International
mdash Distribution modelling Chair Jorge Soberon University of Kansas
Next steps
bull Task group to consult with professional communities and prepare initial recommendations by GB22
bull Continue collaboration with University of Satildeo Paulo Brazil to develop user-based fitness-for-use lsquoprofilesrsquo for GBIForg
bull Future task groups on marine amp invasive species research
ENHANCING DATA FITNESS FOR USE bull 2015-16 objective Enhance fitness of data accessed via GBIForg for key
research uses through engaging expert communities and identify gaps
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
Datamdashby GBIF participant
NOTE Datasets are assigned to countries according to the location of the publishing institution including aggregated datasets with contributors from many other countries httpwwwgbiforg | 06 MAY 2015
1 United States 2433348 6 Finland 1162279
2 United Kingdom 2366907 7 Belgium 707414
3 Australia 2260641 8 Netherlands 628524
4 Sweden 2146770 9 Norway 252036
5 Denmark 1187322 10 Brazil 110487
1 United States 209481914 6 Finland 19626137
2 Sweden 50995697 7 Germany 18792652
3 United Kingdom 49538295 8 France 17549337
4 Australia 36989101 9 Norway 17425011
5 Netherlands 21577009 10 Denmark 10238708
Number of new records publishedmdashTop 10 participant Countries (1 Jan to 30 Apr 2015)
Total number of records publishedmdashTop 10 Participant Countries (as of 30 Apr 2015)
httpwwwgbiforgnewsroomconsultationsstrategicplan
GBIF STRATEGIC PLAN 2017-2021
KIITOS PALJON
To monitor biodiversity trends we need more than just presence data
Concern ndash Prescence-only data
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-06 12 individuals 1 km Butterfly transect
Vanessa cardui PlotB-2014-06 8 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-06 3 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Vanessa cardui PlotA-2014-06 6 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-06 4 individuals 1 km Butterfly transect
Inachis io PlotA-2014-06 1 individual 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-07 15 individuals 1 km Butterfly transect
Vanessa cardui PlotB-2014-07 4 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-07 1 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-08 8 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-08 2 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Platichthys flesus DiveX-20120301 3 individuals 500 m2 Fish dive survey
Sprattus sprattus DiveX-20120301 71 individuals 500 m2 Fish dive survey
Species Event Quantity Sample size Protocol
Vanessa cardui PlotA-2014-07 3 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-07 8 individuals 1 km Butterfly transect
Thecla betulae PlotA-2014-07 2 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotA-2014-08 1 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-08 3 individuals 1 km Butterfly transect
Comparable
Not comparable
EXTENDING GBIF FOR SAMPLE-BASED DATA
SAMPLE-BASED DATA
httpwwwgbiforgpage82105
SAMPLE-BASED DATA
httpeubon-iptgbiforgresourcedor=butterflies-monitoring-scheme-il
Taxon Concept Institution Collection
Taxon Name
Publication
Species Occurrence
Sequence
GBIF Data Index
Catalogue of Life
Conceptual biodiversity data model
Published data sets
Institution Catalogue
Collection Catalogue
Taxon Concept Catalogue
Taxon Name Catalogue
Publication Catalogue
Species Occurrence Catalogue
Sequence Catalogue Comprehensive
service-centred catalogues
Species occurrence record includes scientific name and no explicit species concept
GBIF in future should use services from a shared catalogue to get the best concept (and to add it if not already included)
Catalogues with compatible services form an ecosystem to organise access to distributed biodiversity information
Catalogues are also best place of offer tools and services to support and organise annotations and corrections
GBIF AND GLOBALLY CONNECTED DATA
- Open biodiversity information international perspectives
- Slide Number 2
- Slide Number 3
- Slide Number 4
- Slide Number 5
- Slide Number 6
- Slide Number 7
- Slide Number 8
- Types of data shared through GBIF
- GBIF BY THE NUMBERS
- Data published through GBIforg
- Data publishers
- Visits to GBIForg by Country
- Data download requests by country
- Citations in peer-reviewed research
- Research examples
- GBIF and Digital Object Identifiers
- Slide Number 18
- Slide Number 19
- GBIF and digital object identifiers
- GBIF and digital object identifiers
- Publishing data from research
- Publishing data from research
- Slide Number 24
- Slide Number 25
- Slide Number 26
- Slide Number 27
- Slide Number 28
- Datamdashby GBIF participant
- Slide Number 30
- Slide Number 31
- Concern ndash Prescence-only data
- Slide Number 33
- sample-based data
- sample-based data
- Slide Number 36
-
GBIF AND DIGITAL OBJECT IDENTIFIERS
httpwwwgbiforgdataset7e380070-f762-11e1-a439-00145eb45e9a
GBIF AND DIGITAL OBJECT IDENTIFIERS
httpwwwgbiforgdataset7e380070-f762-11e1-a439-00145eb45e9a
PUBLISHING DATA FROM RESEARCH
PUBLISHING DATA FROM RESEARCH
httpwwwgbiforgdataset4bde5856-6d9f-41cd-880a-2d64eac05b0d
wwwpnasorgcgidoi101073pnas1308933111
mdash Agricultural biodiversity Chair Elizabeth Arnaud Bioversity International
mdash Distribution modelling Chair Jorge Soberon University of Kansas
Next steps
bull Task group to consult with professional communities and prepare initial recommendations by GB22
bull Continue collaboration with University of Satildeo Paulo Brazil to develop user-based fitness-for-use lsquoprofilesrsquo for GBIForg
bull Future task groups on marine amp invasive species research
ENHANCING DATA FITNESS FOR USE bull 2015-16 objective Enhance fitness of data accessed via GBIForg for key
research uses through engaging expert communities and identify gaps
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
Datamdashby GBIF participant
NOTE Datasets are assigned to countries according to the location of the publishing institution including aggregated datasets with contributors from many other countries httpwwwgbiforg | 06 MAY 2015
1 United States 2433348 6 Finland 1162279
2 United Kingdom 2366907 7 Belgium 707414
3 Australia 2260641 8 Netherlands 628524
4 Sweden 2146770 9 Norway 252036
5 Denmark 1187322 10 Brazil 110487
1 United States 209481914 6 Finland 19626137
2 Sweden 50995697 7 Germany 18792652
3 United Kingdom 49538295 8 France 17549337
4 Australia 36989101 9 Norway 17425011
5 Netherlands 21577009 10 Denmark 10238708
Number of new records publishedmdashTop 10 participant Countries (1 Jan to 30 Apr 2015)
Total number of records publishedmdashTop 10 Participant Countries (as of 30 Apr 2015)
httpwwwgbiforgnewsroomconsultationsstrategicplan
GBIF STRATEGIC PLAN 2017-2021
KIITOS PALJON
To monitor biodiversity trends we need more than just presence data
Concern ndash Prescence-only data
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-06 12 individuals 1 km Butterfly transect
Vanessa cardui PlotB-2014-06 8 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-06 3 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Vanessa cardui PlotA-2014-06 6 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-06 4 individuals 1 km Butterfly transect
Inachis io PlotA-2014-06 1 individual 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-07 15 individuals 1 km Butterfly transect
Vanessa cardui PlotB-2014-07 4 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-07 1 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-08 8 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-08 2 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Platichthys flesus DiveX-20120301 3 individuals 500 m2 Fish dive survey
Sprattus sprattus DiveX-20120301 71 individuals 500 m2 Fish dive survey
Species Event Quantity Sample size Protocol
Vanessa cardui PlotA-2014-07 3 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-07 8 individuals 1 km Butterfly transect
Thecla betulae PlotA-2014-07 2 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotA-2014-08 1 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-08 3 individuals 1 km Butterfly transect
Comparable
Not comparable
EXTENDING GBIF FOR SAMPLE-BASED DATA
SAMPLE-BASED DATA
httpwwwgbiforgpage82105
SAMPLE-BASED DATA
httpeubon-iptgbiforgresourcedor=butterflies-monitoring-scheme-il
Taxon Concept Institution Collection
Taxon Name
Publication
Species Occurrence
Sequence
GBIF Data Index
Catalogue of Life
Conceptual biodiversity data model
Published data sets
Institution Catalogue
Collection Catalogue
Taxon Concept Catalogue
Taxon Name Catalogue
Publication Catalogue
Species Occurrence Catalogue
Sequence Catalogue Comprehensive
service-centred catalogues
Species occurrence record includes scientific name and no explicit species concept
GBIF in future should use services from a shared catalogue to get the best concept (and to add it if not already included)
Catalogues with compatible services form an ecosystem to organise access to distributed biodiversity information
Catalogues are also best place of offer tools and services to support and organise annotations and corrections
GBIF AND GLOBALLY CONNECTED DATA
- Open biodiversity information international perspectives
- Slide Number 2
- Slide Number 3
- Slide Number 4
- Slide Number 5
- Slide Number 6
- Slide Number 7
- Slide Number 8
- Types of data shared through GBIF
- GBIF BY THE NUMBERS
- Data published through GBIforg
- Data publishers
- Visits to GBIForg by Country
- Data download requests by country
- Citations in peer-reviewed research
- Research examples
- GBIF and Digital Object Identifiers
- Slide Number 18
- Slide Number 19
- GBIF and digital object identifiers
- GBIF and digital object identifiers
- Publishing data from research
- Publishing data from research
- Slide Number 24
- Slide Number 25
- Slide Number 26
- Slide Number 27
- Slide Number 28
- Datamdashby GBIF participant
- Slide Number 30
- Slide Number 31
- Concern ndash Prescence-only data
- Slide Number 33
- sample-based data
- sample-based data
- Slide Number 36
-
GBIF AND DIGITAL OBJECT IDENTIFIERS
httpwwwgbiforgdataset7e380070-f762-11e1-a439-00145eb45e9a
PUBLISHING DATA FROM RESEARCH
PUBLISHING DATA FROM RESEARCH
httpwwwgbiforgdataset4bde5856-6d9f-41cd-880a-2d64eac05b0d
wwwpnasorgcgidoi101073pnas1308933111
mdash Agricultural biodiversity Chair Elizabeth Arnaud Bioversity International
mdash Distribution modelling Chair Jorge Soberon University of Kansas
Next steps
bull Task group to consult with professional communities and prepare initial recommendations by GB22
bull Continue collaboration with University of Satildeo Paulo Brazil to develop user-based fitness-for-use lsquoprofilesrsquo for GBIForg
bull Future task groups on marine amp invasive species research
ENHANCING DATA FITNESS FOR USE bull 2015-16 objective Enhance fitness of data accessed via GBIForg for key
research uses through engaging expert communities and identify gaps
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
Datamdashby GBIF participant
NOTE Datasets are assigned to countries according to the location of the publishing institution including aggregated datasets with contributors from many other countries httpwwwgbiforg | 06 MAY 2015
1 United States 2433348 6 Finland 1162279
2 United Kingdom 2366907 7 Belgium 707414
3 Australia 2260641 8 Netherlands 628524
4 Sweden 2146770 9 Norway 252036
5 Denmark 1187322 10 Brazil 110487
1 United States 209481914 6 Finland 19626137
2 Sweden 50995697 7 Germany 18792652
3 United Kingdom 49538295 8 France 17549337
4 Australia 36989101 9 Norway 17425011
5 Netherlands 21577009 10 Denmark 10238708
Number of new records publishedmdashTop 10 participant Countries (1 Jan to 30 Apr 2015)
Total number of records publishedmdashTop 10 Participant Countries (as of 30 Apr 2015)
httpwwwgbiforgnewsroomconsultationsstrategicplan
GBIF STRATEGIC PLAN 2017-2021
KIITOS PALJON
To monitor biodiversity trends we need more than just presence data
Concern ndash Prescence-only data
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-06 12 individuals 1 km Butterfly transect
Vanessa cardui PlotB-2014-06 8 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-06 3 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Vanessa cardui PlotA-2014-06 6 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-06 4 individuals 1 km Butterfly transect
Inachis io PlotA-2014-06 1 individual 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-07 15 individuals 1 km Butterfly transect
Vanessa cardui PlotB-2014-07 4 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-07 1 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-08 8 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-08 2 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Platichthys flesus DiveX-20120301 3 individuals 500 m2 Fish dive survey
Sprattus sprattus DiveX-20120301 71 individuals 500 m2 Fish dive survey
Species Event Quantity Sample size Protocol
Vanessa cardui PlotA-2014-07 3 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-07 8 individuals 1 km Butterfly transect
Thecla betulae PlotA-2014-07 2 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotA-2014-08 1 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-08 3 individuals 1 km Butterfly transect
Comparable
Not comparable
EXTENDING GBIF FOR SAMPLE-BASED DATA
SAMPLE-BASED DATA
httpwwwgbiforgpage82105
SAMPLE-BASED DATA
httpeubon-iptgbiforgresourcedor=butterflies-monitoring-scheme-il
Taxon Concept Institution Collection
Taxon Name
Publication
Species Occurrence
Sequence
GBIF Data Index
Catalogue of Life
Conceptual biodiversity data model
Published data sets
Institution Catalogue
Collection Catalogue
Taxon Concept Catalogue
Taxon Name Catalogue
Publication Catalogue
Species Occurrence Catalogue
Sequence Catalogue Comprehensive
service-centred catalogues
Species occurrence record includes scientific name and no explicit species concept
GBIF in future should use services from a shared catalogue to get the best concept (and to add it if not already included)
Catalogues with compatible services form an ecosystem to organise access to distributed biodiversity information
Catalogues are also best place of offer tools and services to support and organise annotations and corrections
GBIF AND GLOBALLY CONNECTED DATA
- Open biodiversity information international perspectives
- Slide Number 2
- Slide Number 3
- Slide Number 4
- Slide Number 5
- Slide Number 6
- Slide Number 7
- Slide Number 8
- Types of data shared through GBIF
- GBIF BY THE NUMBERS
- Data published through GBIforg
- Data publishers
- Visits to GBIForg by Country
- Data download requests by country
- Citations in peer-reviewed research
- Research examples
- GBIF and Digital Object Identifiers
- Slide Number 18
- Slide Number 19
- GBIF and digital object identifiers
- GBIF and digital object identifiers
- Publishing data from research
- Publishing data from research
- Slide Number 24
- Slide Number 25
- Slide Number 26
- Slide Number 27
- Slide Number 28
- Datamdashby GBIF participant
- Slide Number 30
- Slide Number 31
- Concern ndash Prescence-only data
- Slide Number 33
- sample-based data
- sample-based data
- Slide Number 36
-
PUBLISHING DATA FROM RESEARCH
PUBLISHING DATA FROM RESEARCH
httpwwwgbiforgdataset4bde5856-6d9f-41cd-880a-2d64eac05b0d
wwwpnasorgcgidoi101073pnas1308933111
mdash Agricultural biodiversity Chair Elizabeth Arnaud Bioversity International
mdash Distribution modelling Chair Jorge Soberon University of Kansas
Next steps
bull Task group to consult with professional communities and prepare initial recommendations by GB22
bull Continue collaboration with University of Satildeo Paulo Brazil to develop user-based fitness-for-use lsquoprofilesrsquo for GBIForg
bull Future task groups on marine amp invasive species research
ENHANCING DATA FITNESS FOR USE bull 2015-16 objective Enhance fitness of data accessed via GBIForg for key
research uses through engaging expert communities and identify gaps
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
Datamdashby GBIF participant
NOTE Datasets are assigned to countries according to the location of the publishing institution including aggregated datasets with contributors from many other countries httpwwwgbiforg | 06 MAY 2015
1 United States 2433348 6 Finland 1162279
2 United Kingdom 2366907 7 Belgium 707414
3 Australia 2260641 8 Netherlands 628524
4 Sweden 2146770 9 Norway 252036
5 Denmark 1187322 10 Brazil 110487
1 United States 209481914 6 Finland 19626137
2 Sweden 50995697 7 Germany 18792652
3 United Kingdom 49538295 8 France 17549337
4 Australia 36989101 9 Norway 17425011
5 Netherlands 21577009 10 Denmark 10238708
Number of new records publishedmdashTop 10 participant Countries (1 Jan to 30 Apr 2015)
Total number of records publishedmdashTop 10 Participant Countries (as of 30 Apr 2015)
httpwwwgbiforgnewsroomconsultationsstrategicplan
GBIF STRATEGIC PLAN 2017-2021
KIITOS PALJON
To monitor biodiversity trends we need more than just presence data
Concern ndash Prescence-only data
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-06 12 individuals 1 km Butterfly transect
Vanessa cardui PlotB-2014-06 8 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-06 3 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Vanessa cardui PlotA-2014-06 6 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-06 4 individuals 1 km Butterfly transect
Inachis io PlotA-2014-06 1 individual 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-07 15 individuals 1 km Butterfly transect
Vanessa cardui PlotB-2014-07 4 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-07 1 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-08 8 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-08 2 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Platichthys flesus DiveX-20120301 3 individuals 500 m2 Fish dive survey
Sprattus sprattus DiveX-20120301 71 individuals 500 m2 Fish dive survey
Species Event Quantity Sample size Protocol
Vanessa cardui PlotA-2014-07 3 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-07 8 individuals 1 km Butterfly transect
Thecla betulae PlotA-2014-07 2 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotA-2014-08 1 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-08 3 individuals 1 km Butterfly transect
Comparable
Not comparable
EXTENDING GBIF FOR SAMPLE-BASED DATA
SAMPLE-BASED DATA
httpwwwgbiforgpage82105
SAMPLE-BASED DATA
httpeubon-iptgbiforgresourcedor=butterflies-monitoring-scheme-il
Taxon Concept Institution Collection
Taxon Name
Publication
Species Occurrence
Sequence
GBIF Data Index
Catalogue of Life
Conceptual biodiversity data model
Published data sets
Institution Catalogue
Collection Catalogue
Taxon Concept Catalogue
Taxon Name Catalogue
Publication Catalogue
Species Occurrence Catalogue
Sequence Catalogue Comprehensive
service-centred catalogues
Species occurrence record includes scientific name and no explicit species concept
GBIF in future should use services from a shared catalogue to get the best concept (and to add it if not already included)
Catalogues with compatible services form an ecosystem to organise access to distributed biodiversity information
Catalogues are also best place of offer tools and services to support and organise annotations and corrections
GBIF AND GLOBALLY CONNECTED DATA
- Open biodiversity information international perspectives
- Slide Number 2
- Slide Number 3
- Slide Number 4
- Slide Number 5
- Slide Number 6
- Slide Number 7
- Slide Number 8
- Types of data shared through GBIF
- GBIF BY THE NUMBERS
- Data published through GBIforg
- Data publishers
- Visits to GBIForg by Country
- Data download requests by country
- Citations in peer-reviewed research
- Research examples
- GBIF and Digital Object Identifiers
- Slide Number 18
- Slide Number 19
- GBIF and digital object identifiers
- GBIF and digital object identifiers
- Publishing data from research
- Publishing data from research
- Slide Number 24
- Slide Number 25
- Slide Number 26
- Slide Number 27
- Slide Number 28
- Datamdashby GBIF participant
- Slide Number 30
- Slide Number 31
- Concern ndash Prescence-only data
- Slide Number 33
- sample-based data
- sample-based data
- Slide Number 36
-
PUBLISHING DATA FROM RESEARCH
httpwwwgbiforgdataset4bde5856-6d9f-41cd-880a-2d64eac05b0d
wwwpnasorgcgidoi101073pnas1308933111
mdash Agricultural biodiversity Chair Elizabeth Arnaud Bioversity International
mdash Distribution modelling Chair Jorge Soberon University of Kansas
Next steps
bull Task group to consult with professional communities and prepare initial recommendations by GB22
bull Continue collaboration with University of Satildeo Paulo Brazil to develop user-based fitness-for-use lsquoprofilesrsquo for GBIForg
bull Future task groups on marine amp invasive species research
ENHANCING DATA FITNESS FOR USE bull 2015-16 objective Enhance fitness of data accessed via GBIForg for key
research uses through engaging expert communities and identify gaps
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
Datamdashby GBIF participant
NOTE Datasets are assigned to countries according to the location of the publishing institution including aggregated datasets with contributors from many other countries httpwwwgbiforg | 06 MAY 2015
1 United States 2433348 6 Finland 1162279
2 United Kingdom 2366907 7 Belgium 707414
3 Australia 2260641 8 Netherlands 628524
4 Sweden 2146770 9 Norway 252036
5 Denmark 1187322 10 Brazil 110487
1 United States 209481914 6 Finland 19626137
2 Sweden 50995697 7 Germany 18792652
3 United Kingdom 49538295 8 France 17549337
4 Australia 36989101 9 Norway 17425011
5 Netherlands 21577009 10 Denmark 10238708
Number of new records publishedmdashTop 10 participant Countries (1 Jan to 30 Apr 2015)
Total number of records publishedmdashTop 10 Participant Countries (as of 30 Apr 2015)
httpwwwgbiforgnewsroomconsultationsstrategicplan
GBIF STRATEGIC PLAN 2017-2021
KIITOS PALJON
To monitor biodiversity trends we need more than just presence data
Concern ndash Prescence-only data
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-06 12 individuals 1 km Butterfly transect
Vanessa cardui PlotB-2014-06 8 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-06 3 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Vanessa cardui PlotA-2014-06 6 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-06 4 individuals 1 km Butterfly transect
Inachis io PlotA-2014-06 1 individual 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-07 15 individuals 1 km Butterfly transect
Vanessa cardui PlotB-2014-07 4 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-07 1 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-08 8 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-08 2 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Platichthys flesus DiveX-20120301 3 individuals 500 m2 Fish dive survey
Sprattus sprattus DiveX-20120301 71 individuals 500 m2 Fish dive survey
Species Event Quantity Sample size Protocol
Vanessa cardui PlotA-2014-07 3 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-07 8 individuals 1 km Butterfly transect
Thecla betulae PlotA-2014-07 2 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotA-2014-08 1 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-08 3 individuals 1 km Butterfly transect
Comparable
Not comparable
EXTENDING GBIF FOR SAMPLE-BASED DATA
SAMPLE-BASED DATA
httpwwwgbiforgpage82105
SAMPLE-BASED DATA
httpeubon-iptgbiforgresourcedor=butterflies-monitoring-scheme-il
Taxon Concept Institution Collection
Taxon Name
Publication
Species Occurrence
Sequence
GBIF Data Index
Catalogue of Life
Conceptual biodiversity data model
Published data sets
Institution Catalogue
Collection Catalogue
Taxon Concept Catalogue
Taxon Name Catalogue
Publication Catalogue
Species Occurrence Catalogue
Sequence Catalogue Comprehensive
service-centred catalogues
Species occurrence record includes scientific name and no explicit species concept
GBIF in future should use services from a shared catalogue to get the best concept (and to add it if not already included)
Catalogues with compatible services form an ecosystem to organise access to distributed biodiversity information
Catalogues are also best place of offer tools and services to support and organise annotations and corrections
GBIF AND GLOBALLY CONNECTED DATA
- Open biodiversity information international perspectives
- Slide Number 2
- Slide Number 3
- Slide Number 4
- Slide Number 5
- Slide Number 6
- Slide Number 7
- Slide Number 8
- Types of data shared through GBIF
- GBIF BY THE NUMBERS
- Data published through GBIforg
- Data publishers
- Visits to GBIForg by Country
- Data download requests by country
- Citations in peer-reviewed research
- Research examples
- GBIF and Digital Object Identifiers
- Slide Number 18
- Slide Number 19
- GBIF and digital object identifiers
- GBIF and digital object identifiers
- Publishing data from research
- Publishing data from research
- Slide Number 24
- Slide Number 25
- Slide Number 26
- Slide Number 27
- Slide Number 28
- Datamdashby GBIF participant
- Slide Number 30
- Slide Number 31
- Concern ndash Prescence-only data
- Slide Number 33
- sample-based data
- sample-based data
- Slide Number 36
-
wwwpnasorgcgidoi101073pnas1308933111
mdash Agricultural biodiversity Chair Elizabeth Arnaud Bioversity International
mdash Distribution modelling Chair Jorge Soberon University of Kansas
Next steps
bull Task group to consult with professional communities and prepare initial recommendations by GB22
bull Continue collaboration with University of Satildeo Paulo Brazil to develop user-based fitness-for-use lsquoprofilesrsquo for GBIForg
bull Future task groups on marine amp invasive species research
ENHANCING DATA FITNESS FOR USE bull 2015-16 objective Enhance fitness of data accessed via GBIForg for key
research uses through engaging expert communities and identify gaps
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
Datamdashby GBIF participant
NOTE Datasets are assigned to countries according to the location of the publishing institution including aggregated datasets with contributors from many other countries httpwwwgbiforg | 06 MAY 2015
1 United States 2433348 6 Finland 1162279
2 United Kingdom 2366907 7 Belgium 707414
3 Australia 2260641 8 Netherlands 628524
4 Sweden 2146770 9 Norway 252036
5 Denmark 1187322 10 Brazil 110487
1 United States 209481914 6 Finland 19626137
2 Sweden 50995697 7 Germany 18792652
3 United Kingdom 49538295 8 France 17549337
4 Australia 36989101 9 Norway 17425011
5 Netherlands 21577009 10 Denmark 10238708
Number of new records publishedmdashTop 10 participant Countries (1 Jan to 30 Apr 2015)
Total number of records publishedmdashTop 10 Participant Countries (as of 30 Apr 2015)
httpwwwgbiforgnewsroomconsultationsstrategicplan
GBIF STRATEGIC PLAN 2017-2021
KIITOS PALJON
To monitor biodiversity trends we need more than just presence data
Concern ndash Prescence-only data
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-06 12 individuals 1 km Butterfly transect
Vanessa cardui PlotB-2014-06 8 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-06 3 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Vanessa cardui PlotA-2014-06 6 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-06 4 individuals 1 km Butterfly transect
Inachis io PlotA-2014-06 1 individual 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-07 15 individuals 1 km Butterfly transect
Vanessa cardui PlotB-2014-07 4 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-07 1 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-08 8 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-08 2 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Platichthys flesus DiveX-20120301 3 individuals 500 m2 Fish dive survey
Sprattus sprattus DiveX-20120301 71 individuals 500 m2 Fish dive survey
Species Event Quantity Sample size Protocol
Vanessa cardui PlotA-2014-07 3 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-07 8 individuals 1 km Butterfly transect
Thecla betulae PlotA-2014-07 2 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotA-2014-08 1 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-08 3 individuals 1 km Butterfly transect
Comparable
Not comparable
EXTENDING GBIF FOR SAMPLE-BASED DATA
SAMPLE-BASED DATA
httpwwwgbiforgpage82105
SAMPLE-BASED DATA
httpeubon-iptgbiforgresourcedor=butterflies-monitoring-scheme-il
Taxon Concept Institution Collection
Taxon Name
Publication
Species Occurrence
Sequence
GBIF Data Index
Catalogue of Life
Conceptual biodiversity data model
Published data sets
Institution Catalogue
Collection Catalogue
Taxon Concept Catalogue
Taxon Name Catalogue
Publication Catalogue
Species Occurrence Catalogue
Sequence Catalogue Comprehensive
service-centred catalogues
Species occurrence record includes scientific name and no explicit species concept
GBIF in future should use services from a shared catalogue to get the best concept (and to add it if not already included)
Catalogues with compatible services form an ecosystem to organise access to distributed biodiversity information
Catalogues are also best place of offer tools and services to support and organise annotations and corrections
GBIF AND GLOBALLY CONNECTED DATA
- Open biodiversity information international perspectives
- Slide Number 2
- Slide Number 3
- Slide Number 4
- Slide Number 5
- Slide Number 6
- Slide Number 7
- Slide Number 8
- Types of data shared through GBIF
- GBIF BY THE NUMBERS
- Data published through GBIforg
- Data publishers
- Visits to GBIForg by Country
- Data download requests by country
- Citations in peer-reviewed research
- Research examples
- GBIF and Digital Object Identifiers
- Slide Number 18
- Slide Number 19
- GBIF and digital object identifiers
- GBIF and digital object identifiers
- Publishing data from research
- Publishing data from research
- Slide Number 24
- Slide Number 25
- Slide Number 26
- Slide Number 27
- Slide Number 28
- Datamdashby GBIF participant
- Slide Number 30
- Slide Number 31
- Concern ndash Prescence-only data
- Slide Number 33
- sample-based data
- sample-based data
- Slide Number 36
-
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
Datamdashby GBIF participant
NOTE Datasets are assigned to countries according to the location of the publishing institution including aggregated datasets with contributors from many other countries httpwwwgbiforg | 06 MAY 2015
1 United States 2433348 6 Finland 1162279
2 United Kingdom 2366907 7 Belgium 707414
3 Australia 2260641 8 Netherlands 628524
4 Sweden 2146770 9 Norway 252036
5 Denmark 1187322 10 Brazil 110487
1 United States 209481914 6 Finland 19626137
2 Sweden 50995697 7 Germany 18792652
3 United Kingdom 49538295 8 France 17549337
4 Australia 36989101 9 Norway 17425011
5 Netherlands 21577009 10 Denmark 10238708
Number of new records publishedmdashTop 10 participant Countries (1 Jan to 30 Apr 2015)
Total number of records publishedmdashTop 10 Participant Countries (as of 30 Apr 2015)
httpwwwgbiforgnewsroomconsultationsstrategicplan
GBIF STRATEGIC PLAN 2017-2021
KIITOS PALJON
To monitor biodiversity trends we need more than just presence data
Concern ndash Prescence-only data
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-06 12 individuals 1 km Butterfly transect
Vanessa cardui PlotB-2014-06 8 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-06 3 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Vanessa cardui PlotA-2014-06 6 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-06 4 individuals 1 km Butterfly transect
Inachis io PlotA-2014-06 1 individual 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-07 15 individuals 1 km Butterfly transect
Vanessa cardui PlotB-2014-07 4 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-07 1 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-08 8 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-08 2 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Platichthys flesus DiveX-20120301 3 individuals 500 m2 Fish dive survey
Sprattus sprattus DiveX-20120301 71 individuals 500 m2 Fish dive survey
Species Event Quantity Sample size Protocol
Vanessa cardui PlotA-2014-07 3 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-07 8 individuals 1 km Butterfly transect
Thecla betulae PlotA-2014-07 2 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotA-2014-08 1 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-08 3 individuals 1 km Butterfly transect
Comparable
Not comparable
EXTENDING GBIF FOR SAMPLE-BASED DATA
SAMPLE-BASED DATA
httpwwwgbiforgpage82105
SAMPLE-BASED DATA
httpeubon-iptgbiforgresourcedor=butterflies-monitoring-scheme-il
Taxon Concept Institution Collection
Taxon Name
Publication
Species Occurrence
Sequence
GBIF Data Index
Catalogue of Life
Conceptual biodiversity data model
Published data sets
Institution Catalogue
Collection Catalogue
Taxon Concept Catalogue
Taxon Name Catalogue
Publication Catalogue
Species Occurrence Catalogue
Sequence Catalogue Comprehensive
service-centred catalogues
Species occurrence record includes scientific name and no explicit species concept
GBIF in future should use services from a shared catalogue to get the best concept (and to add it if not already included)
Catalogues with compatible services form an ecosystem to organise access to distributed biodiversity information
Catalogues are also best place of offer tools and services to support and organise annotations and corrections
GBIF AND GLOBALLY CONNECTED DATA
- Open biodiversity information international perspectives
- Slide Number 2
- Slide Number 3
- Slide Number 4
- Slide Number 5
- Slide Number 6
- Slide Number 7
- Slide Number 8
- Types of data shared through GBIF
- GBIF BY THE NUMBERS
- Data published through GBIforg
- Data publishers
- Visits to GBIForg by Country
- Data download requests by country
- Citations in peer-reviewed research
- Research examples
- GBIF and Digital Object Identifiers
- Slide Number 18
- Slide Number 19
- GBIF and digital object identifiers
- GBIF and digital object identifiers
- Publishing data from research
- Publishing data from research
- Slide Number 24
- Slide Number 25
- Slide Number 26
- Slide Number 27
- Slide Number 28
- Datamdashby GBIF participant
- Slide Number 30
- Slide Number 31
- Concern ndash Prescence-only data
- Slide Number 33
- sample-based data
- sample-based data
- Slide Number 36
-
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
Datamdashby GBIF participant
NOTE Datasets are assigned to countries according to the location of the publishing institution including aggregated datasets with contributors from many other countries httpwwwgbiforg | 06 MAY 2015
1 United States 2433348 6 Finland 1162279
2 United Kingdom 2366907 7 Belgium 707414
3 Australia 2260641 8 Netherlands 628524
4 Sweden 2146770 9 Norway 252036
5 Denmark 1187322 10 Brazil 110487
1 United States 209481914 6 Finland 19626137
2 Sweden 50995697 7 Germany 18792652
3 United Kingdom 49538295 8 France 17549337
4 Australia 36989101 9 Norway 17425011
5 Netherlands 21577009 10 Denmark 10238708
Number of new records publishedmdashTop 10 participant Countries (1 Jan to 30 Apr 2015)
Total number of records publishedmdashTop 10 Participant Countries (as of 30 Apr 2015)
httpwwwgbiforgnewsroomconsultationsstrategicplan
GBIF STRATEGIC PLAN 2017-2021
KIITOS PALJON
To monitor biodiversity trends we need more than just presence data
Concern ndash Prescence-only data
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-06 12 individuals 1 km Butterfly transect
Vanessa cardui PlotB-2014-06 8 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-06 3 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Vanessa cardui PlotA-2014-06 6 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-06 4 individuals 1 km Butterfly transect
Inachis io PlotA-2014-06 1 individual 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-07 15 individuals 1 km Butterfly transect
Vanessa cardui PlotB-2014-07 4 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-07 1 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-08 8 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-08 2 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Platichthys flesus DiveX-20120301 3 individuals 500 m2 Fish dive survey
Sprattus sprattus DiveX-20120301 71 individuals 500 m2 Fish dive survey
Species Event Quantity Sample size Protocol
Vanessa cardui PlotA-2014-07 3 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-07 8 individuals 1 km Butterfly transect
Thecla betulae PlotA-2014-07 2 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotA-2014-08 1 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-08 3 individuals 1 km Butterfly transect
Comparable
Not comparable
EXTENDING GBIF FOR SAMPLE-BASED DATA
SAMPLE-BASED DATA
httpwwwgbiforgpage82105
SAMPLE-BASED DATA
httpeubon-iptgbiforgresourcedor=butterflies-monitoring-scheme-il
Taxon Concept Institution Collection
Taxon Name
Publication
Species Occurrence
Sequence
GBIF Data Index
Catalogue of Life
Conceptual biodiversity data model
Published data sets
Institution Catalogue
Collection Catalogue
Taxon Concept Catalogue
Taxon Name Catalogue
Publication Catalogue
Species Occurrence Catalogue
Sequence Catalogue Comprehensive
service-centred catalogues
Species occurrence record includes scientific name and no explicit species concept
GBIF in future should use services from a shared catalogue to get the best concept (and to add it if not already included)
Catalogues with compatible services form an ecosystem to organise access to distributed biodiversity information
Catalogues are also best place of offer tools and services to support and organise annotations and corrections
GBIF AND GLOBALLY CONNECTED DATA
- Open biodiversity information international perspectives
- Slide Number 2
- Slide Number 3
- Slide Number 4
- Slide Number 5
- Slide Number 6
- Slide Number 7
- Slide Number 8
- Types of data shared through GBIF
- GBIF BY THE NUMBERS
- Data published through GBIforg
- Data publishers
- Visits to GBIForg by Country
- Data download requests by country
- Citations in peer-reviewed research
- Research examples
- GBIF and Digital Object Identifiers
- Slide Number 18
- Slide Number 19
- GBIF and digital object identifiers
- GBIF and digital object identifiers
- Publishing data from research
- Publishing data from research
- Slide Number 24
- Slide Number 25
- Slide Number 26
- Slide Number 27
- Slide Number 28
- Datamdashby GBIF participant
- Slide Number 30
- Slide Number 31
- Concern ndash Prescence-only data
- Slide Number 33
- sample-based data
- sample-based data
- Slide Number 36
-
FINLAND AND GLOBAL BIODIVERSITY DATA
FINLAND AND GLOBAL BIODIVERSITY DATA
Datamdashby GBIF participant
NOTE Datasets are assigned to countries according to the location of the publishing institution including aggregated datasets with contributors from many other countries httpwwwgbiforg | 06 MAY 2015
1 United States 2433348 6 Finland 1162279
2 United Kingdom 2366907 7 Belgium 707414
3 Australia 2260641 8 Netherlands 628524
4 Sweden 2146770 9 Norway 252036
5 Denmark 1187322 10 Brazil 110487
1 United States 209481914 6 Finland 19626137
2 Sweden 50995697 7 Germany 18792652
3 United Kingdom 49538295 8 France 17549337
4 Australia 36989101 9 Norway 17425011
5 Netherlands 21577009 10 Denmark 10238708
Number of new records publishedmdashTop 10 participant Countries (1 Jan to 30 Apr 2015)
Total number of records publishedmdashTop 10 Participant Countries (as of 30 Apr 2015)
httpwwwgbiforgnewsroomconsultationsstrategicplan
GBIF STRATEGIC PLAN 2017-2021
KIITOS PALJON
To monitor biodiversity trends we need more than just presence data
Concern ndash Prescence-only data
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-06 12 individuals 1 km Butterfly transect
Vanessa cardui PlotB-2014-06 8 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-06 3 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Vanessa cardui PlotA-2014-06 6 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-06 4 individuals 1 km Butterfly transect
Inachis io PlotA-2014-06 1 individual 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-07 15 individuals 1 km Butterfly transect
Vanessa cardui PlotB-2014-07 4 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-07 1 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-08 8 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-08 2 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Platichthys flesus DiveX-20120301 3 individuals 500 m2 Fish dive survey
Sprattus sprattus DiveX-20120301 71 individuals 500 m2 Fish dive survey
Species Event Quantity Sample size Protocol
Vanessa cardui PlotA-2014-07 3 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-07 8 individuals 1 km Butterfly transect
Thecla betulae PlotA-2014-07 2 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotA-2014-08 1 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-08 3 individuals 1 km Butterfly transect
Comparable
Not comparable
EXTENDING GBIF FOR SAMPLE-BASED DATA
SAMPLE-BASED DATA
httpwwwgbiforgpage82105
SAMPLE-BASED DATA
httpeubon-iptgbiforgresourcedor=butterflies-monitoring-scheme-il
Taxon Concept Institution Collection
Taxon Name
Publication
Species Occurrence
Sequence
GBIF Data Index
Catalogue of Life
Conceptual biodiversity data model
Published data sets
Institution Catalogue
Collection Catalogue
Taxon Concept Catalogue
Taxon Name Catalogue
Publication Catalogue
Species Occurrence Catalogue
Sequence Catalogue Comprehensive
service-centred catalogues
Species occurrence record includes scientific name and no explicit species concept
GBIF in future should use services from a shared catalogue to get the best concept (and to add it if not already included)
Catalogues with compatible services form an ecosystem to organise access to distributed biodiversity information
Catalogues are also best place of offer tools and services to support and organise annotations and corrections
GBIF AND GLOBALLY CONNECTED DATA
- Open biodiversity information international perspectives
- Slide Number 2
- Slide Number 3
- Slide Number 4
- Slide Number 5
- Slide Number 6
- Slide Number 7
- Slide Number 8
- Types of data shared through GBIF
- GBIF BY THE NUMBERS
- Data published through GBIforg
- Data publishers
- Visits to GBIForg by Country
- Data download requests by country
- Citations in peer-reviewed research
- Research examples
- GBIF and Digital Object Identifiers
- Slide Number 18
- Slide Number 19
- GBIF and digital object identifiers
- GBIF and digital object identifiers
- Publishing data from research
- Publishing data from research
- Slide Number 24
- Slide Number 25
- Slide Number 26
- Slide Number 27
- Slide Number 28
- Datamdashby GBIF participant
- Slide Number 30
- Slide Number 31
- Concern ndash Prescence-only data
- Slide Number 33
- sample-based data
- sample-based data
- Slide Number 36
-
FINLAND AND GLOBAL BIODIVERSITY DATA
Datamdashby GBIF participant
NOTE Datasets are assigned to countries according to the location of the publishing institution including aggregated datasets with contributors from many other countries httpwwwgbiforg | 06 MAY 2015
1 United States 2433348 6 Finland 1162279
2 United Kingdom 2366907 7 Belgium 707414
3 Australia 2260641 8 Netherlands 628524
4 Sweden 2146770 9 Norway 252036
5 Denmark 1187322 10 Brazil 110487
1 United States 209481914 6 Finland 19626137
2 Sweden 50995697 7 Germany 18792652
3 United Kingdom 49538295 8 France 17549337
4 Australia 36989101 9 Norway 17425011
5 Netherlands 21577009 10 Denmark 10238708
Number of new records publishedmdashTop 10 participant Countries (1 Jan to 30 Apr 2015)
Total number of records publishedmdashTop 10 Participant Countries (as of 30 Apr 2015)
httpwwwgbiforgnewsroomconsultationsstrategicplan
GBIF STRATEGIC PLAN 2017-2021
KIITOS PALJON
To monitor biodiversity trends we need more than just presence data
Concern ndash Prescence-only data
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-06 12 individuals 1 km Butterfly transect
Vanessa cardui PlotB-2014-06 8 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-06 3 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Vanessa cardui PlotA-2014-06 6 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-06 4 individuals 1 km Butterfly transect
Inachis io PlotA-2014-06 1 individual 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-07 15 individuals 1 km Butterfly transect
Vanessa cardui PlotB-2014-07 4 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-07 1 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-08 8 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-08 2 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Platichthys flesus DiveX-20120301 3 individuals 500 m2 Fish dive survey
Sprattus sprattus DiveX-20120301 71 individuals 500 m2 Fish dive survey
Species Event Quantity Sample size Protocol
Vanessa cardui PlotA-2014-07 3 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-07 8 individuals 1 km Butterfly transect
Thecla betulae PlotA-2014-07 2 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotA-2014-08 1 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-08 3 individuals 1 km Butterfly transect
Comparable
Not comparable
EXTENDING GBIF FOR SAMPLE-BASED DATA
SAMPLE-BASED DATA
httpwwwgbiforgpage82105
SAMPLE-BASED DATA
httpeubon-iptgbiforgresourcedor=butterflies-monitoring-scheme-il
Taxon Concept Institution Collection
Taxon Name
Publication
Species Occurrence
Sequence
GBIF Data Index
Catalogue of Life
Conceptual biodiversity data model
Published data sets
Institution Catalogue
Collection Catalogue
Taxon Concept Catalogue
Taxon Name Catalogue
Publication Catalogue
Species Occurrence Catalogue
Sequence Catalogue Comprehensive
service-centred catalogues
Species occurrence record includes scientific name and no explicit species concept
GBIF in future should use services from a shared catalogue to get the best concept (and to add it if not already included)
Catalogues with compatible services form an ecosystem to organise access to distributed biodiversity information
Catalogues are also best place of offer tools and services to support and organise annotations and corrections
GBIF AND GLOBALLY CONNECTED DATA
- Open biodiversity information international perspectives
- Slide Number 2
- Slide Number 3
- Slide Number 4
- Slide Number 5
- Slide Number 6
- Slide Number 7
- Slide Number 8
- Types of data shared through GBIF
- GBIF BY THE NUMBERS
- Data published through GBIforg
- Data publishers
- Visits to GBIForg by Country
- Data download requests by country
- Citations in peer-reviewed research
- Research examples
- GBIF and Digital Object Identifiers
- Slide Number 18
- Slide Number 19
- GBIF and digital object identifiers
- GBIF and digital object identifiers
- Publishing data from research
- Publishing data from research
- Slide Number 24
- Slide Number 25
- Slide Number 26
- Slide Number 27
- Slide Number 28
- Datamdashby GBIF participant
- Slide Number 30
- Slide Number 31
- Concern ndash Prescence-only data
- Slide Number 33
- sample-based data
- sample-based data
- Slide Number 36
-
Datamdashby GBIF participant
NOTE Datasets are assigned to countries according to the location of the publishing institution including aggregated datasets with contributors from many other countries httpwwwgbiforg | 06 MAY 2015
1 United States 2433348 6 Finland 1162279
2 United Kingdom 2366907 7 Belgium 707414
3 Australia 2260641 8 Netherlands 628524
4 Sweden 2146770 9 Norway 252036
5 Denmark 1187322 10 Brazil 110487
1 United States 209481914 6 Finland 19626137
2 Sweden 50995697 7 Germany 18792652
3 United Kingdom 49538295 8 France 17549337
4 Australia 36989101 9 Norway 17425011
5 Netherlands 21577009 10 Denmark 10238708
Number of new records publishedmdashTop 10 participant Countries (1 Jan to 30 Apr 2015)
Total number of records publishedmdashTop 10 Participant Countries (as of 30 Apr 2015)
httpwwwgbiforgnewsroomconsultationsstrategicplan
GBIF STRATEGIC PLAN 2017-2021
KIITOS PALJON
To monitor biodiversity trends we need more than just presence data
Concern ndash Prescence-only data
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-06 12 individuals 1 km Butterfly transect
Vanessa cardui PlotB-2014-06 8 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-06 3 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Vanessa cardui PlotA-2014-06 6 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-06 4 individuals 1 km Butterfly transect
Inachis io PlotA-2014-06 1 individual 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-07 15 individuals 1 km Butterfly transect
Vanessa cardui PlotB-2014-07 4 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-07 1 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-08 8 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-08 2 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Platichthys flesus DiveX-20120301 3 individuals 500 m2 Fish dive survey
Sprattus sprattus DiveX-20120301 71 individuals 500 m2 Fish dive survey
Species Event Quantity Sample size Protocol
Vanessa cardui PlotA-2014-07 3 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-07 8 individuals 1 km Butterfly transect
Thecla betulae PlotA-2014-07 2 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotA-2014-08 1 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-08 3 individuals 1 km Butterfly transect
Comparable
Not comparable
EXTENDING GBIF FOR SAMPLE-BASED DATA
SAMPLE-BASED DATA
httpwwwgbiforgpage82105
SAMPLE-BASED DATA
httpeubon-iptgbiforgresourcedor=butterflies-monitoring-scheme-il
Taxon Concept Institution Collection
Taxon Name
Publication
Species Occurrence
Sequence
GBIF Data Index
Catalogue of Life
Conceptual biodiversity data model
Published data sets
Institution Catalogue
Collection Catalogue
Taxon Concept Catalogue
Taxon Name Catalogue
Publication Catalogue
Species Occurrence Catalogue
Sequence Catalogue Comprehensive
service-centred catalogues
Species occurrence record includes scientific name and no explicit species concept
GBIF in future should use services from a shared catalogue to get the best concept (and to add it if not already included)
Catalogues with compatible services form an ecosystem to organise access to distributed biodiversity information
Catalogues are also best place of offer tools and services to support and organise annotations and corrections
GBIF AND GLOBALLY CONNECTED DATA
- Open biodiversity information international perspectives
- Slide Number 2
- Slide Number 3
- Slide Number 4
- Slide Number 5
- Slide Number 6
- Slide Number 7
- Slide Number 8
- Types of data shared through GBIF
- GBIF BY THE NUMBERS
- Data published through GBIforg
- Data publishers
- Visits to GBIForg by Country
- Data download requests by country
- Citations in peer-reviewed research
- Research examples
- GBIF and Digital Object Identifiers
- Slide Number 18
- Slide Number 19
- GBIF and digital object identifiers
- GBIF and digital object identifiers
- Publishing data from research
- Publishing data from research
- Slide Number 24
- Slide Number 25
- Slide Number 26
- Slide Number 27
- Slide Number 28
- Datamdashby GBIF participant
- Slide Number 30
- Slide Number 31
- Concern ndash Prescence-only data
- Slide Number 33
- sample-based data
- sample-based data
- Slide Number 36
-
httpwwwgbiforgnewsroomconsultationsstrategicplan
GBIF STRATEGIC PLAN 2017-2021
KIITOS PALJON
To monitor biodiversity trends we need more than just presence data
Concern ndash Prescence-only data
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-06 12 individuals 1 km Butterfly transect
Vanessa cardui PlotB-2014-06 8 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-06 3 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Vanessa cardui PlotA-2014-06 6 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-06 4 individuals 1 km Butterfly transect
Inachis io PlotA-2014-06 1 individual 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-07 15 individuals 1 km Butterfly transect
Vanessa cardui PlotB-2014-07 4 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-07 1 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-08 8 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-08 2 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Platichthys flesus DiveX-20120301 3 individuals 500 m2 Fish dive survey
Sprattus sprattus DiveX-20120301 71 individuals 500 m2 Fish dive survey
Species Event Quantity Sample size Protocol
Vanessa cardui PlotA-2014-07 3 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-07 8 individuals 1 km Butterfly transect
Thecla betulae PlotA-2014-07 2 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotA-2014-08 1 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-08 3 individuals 1 km Butterfly transect
Comparable
Not comparable
EXTENDING GBIF FOR SAMPLE-BASED DATA
SAMPLE-BASED DATA
httpwwwgbiforgpage82105
SAMPLE-BASED DATA
httpeubon-iptgbiforgresourcedor=butterflies-monitoring-scheme-il
Taxon Concept Institution Collection
Taxon Name
Publication
Species Occurrence
Sequence
GBIF Data Index
Catalogue of Life
Conceptual biodiversity data model
Published data sets
Institution Catalogue
Collection Catalogue
Taxon Concept Catalogue
Taxon Name Catalogue
Publication Catalogue
Species Occurrence Catalogue
Sequence Catalogue Comprehensive
service-centred catalogues
Species occurrence record includes scientific name and no explicit species concept
GBIF in future should use services from a shared catalogue to get the best concept (and to add it if not already included)
Catalogues with compatible services form an ecosystem to organise access to distributed biodiversity information
Catalogues are also best place of offer tools and services to support and organise annotations and corrections
GBIF AND GLOBALLY CONNECTED DATA
- Open biodiversity information international perspectives
- Slide Number 2
- Slide Number 3
- Slide Number 4
- Slide Number 5
- Slide Number 6
- Slide Number 7
- Slide Number 8
- Types of data shared through GBIF
- GBIF BY THE NUMBERS
- Data published through GBIforg
- Data publishers
- Visits to GBIForg by Country
- Data download requests by country
- Citations in peer-reviewed research
- Research examples
- GBIF and Digital Object Identifiers
- Slide Number 18
- Slide Number 19
- GBIF and digital object identifiers
- GBIF and digital object identifiers
- Publishing data from research
- Publishing data from research
- Slide Number 24
- Slide Number 25
- Slide Number 26
- Slide Number 27
- Slide Number 28
- Datamdashby GBIF participant
- Slide Number 30
- Slide Number 31
- Concern ndash Prescence-only data
- Slide Number 33
- sample-based data
- sample-based data
- Slide Number 36
-
KIITOS PALJON
To monitor biodiversity trends we need more than just presence data
Concern ndash Prescence-only data
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-06 12 individuals 1 km Butterfly transect
Vanessa cardui PlotB-2014-06 8 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-06 3 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Vanessa cardui PlotA-2014-06 6 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-06 4 individuals 1 km Butterfly transect
Inachis io PlotA-2014-06 1 individual 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-07 15 individuals 1 km Butterfly transect
Vanessa cardui PlotB-2014-07 4 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-07 1 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-08 8 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-08 2 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Platichthys flesus DiveX-20120301 3 individuals 500 m2 Fish dive survey
Sprattus sprattus DiveX-20120301 71 individuals 500 m2 Fish dive survey
Species Event Quantity Sample size Protocol
Vanessa cardui PlotA-2014-07 3 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-07 8 individuals 1 km Butterfly transect
Thecla betulae PlotA-2014-07 2 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotA-2014-08 1 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-08 3 individuals 1 km Butterfly transect
Comparable
Not comparable
EXTENDING GBIF FOR SAMPLE-BASED DATA
SAMPLE-BASED DATA
httpwwwgbiforgpage82105
SAMPLE-BASED DATA
httpeubon-iptgbiforgresourcedor=butterflies-monitoring-scheme-il
Taxon Concept Institution Collection
Taxon Name
Publication
Species Occurrence
Sequence
GBIF Data Index
Catalogue of Life
Conceptual biodiversity data model
Published data sets
Institution Catalogue
Collection Catalogue
Taxon Concept Catalogue
Taxon Name Catalogue
Publication Catalogue
Species Occurrence Catalogue
Sequence Catalogue Comprehensive
service-centred catalogues
Species occurrence record includes scientific name and no explicit species concept
GBIF in future should use services from a shared catalogue to get the best concept (and to add it if not already included)
Catalogues with compatible services form an ecosystem to organise access to distributed biodiversity information
Catalogues are also best place of offer tools and services to support and organise annotations and corrections
GBIF AND GLOBALLY CONNECTED DATA
- Open biodiversity information international perspectives
- Slide Number 2
- Slide Number 3
- Slide Number 4
- Slide Number 5
- Slide Number 6
- Slide Number 7
- Slide Number 8
- Types of data shared through GBIF
- GBIF BY THE NUMBERS
- Data published through GBIforg
- Data publishers
- Visits to GBIForg by Country
- Data download requests by country
- Citations in peer-reviewed research
- Research examples
- GBIF and Digital Object Identifiers
- Slide Number 18
- Slide Number 19
- GBIF and digital object identifiers
- GBIF and digital object identifiers
- Publishing data from research
- Publishing data from research
- Slide Number 24
- Slide Number 25
- Slide Number 26
- Slide Number 27
- Slide Number 28
- Datamdashby GBIF participant
- Slide Number 30
- Slide Number 31
- Concern ndash Prescence-only data
- Slide Number 33
- sample-based data
- sample-based data
- Slide Number 36
-
To monitor biodiversity trends we need more than just presence data
Concern ndash Prescence-only data
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-06 12 individuals 1 km Butterfly transect
Vanessa cardui PlotB-2014-06 8 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-06 3 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Vanessa cardui PlotA-2014-06 6 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-06 4 individuals 1 km Butterfly transect
Inachis io PlotA-2014-06 1 individual 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-07 15 individuals 1 km Butterfly transect
Vanessa cardui PlotB-2014-07 4 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-07 1 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-08 8 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-08 2 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Platichthys flesus DiveX-20120301 3 individuals 500 m2 Fish dive survey
Sprattus sprattus DiveX-20120301 71 individuals 500 m2 Fish dive survey
Species Event Quantity Sample size Protocol
Vanessa cardui PlotA-2014-07 3 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-07 8 individuals 1 km Butterfly transect
Thecla betulae PlotA-2014-07 2 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotA-2014-08 1 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-08 3 individuals 1 km Butterfly transect
Comparable
Not comparable
EXTENDING GBIF FOR SAMPLE-BASED DATA
SAMPLE-BASED DATA
httpwwwgbiforgpage82105
SAMPLE-BASED DATA
httpeubon-iptgbiforgresourcedor=butterflies-monitoring-scheme-il
Taxon Concept Institution Collection
Taxon Name
Publication
Species Occurrence
Sequence
GBIF Data Index
Catalogue of Life
Conceptual biodiversity data model
Published data sets
Institution Catalogue
Collection Catalogue
Taxon Concept Catalogue
Taxon Name Catalogue
Publication Catalogue
Species Occurrence Catalogue
Sequence Catalogue Comprehensive
service-centred catalogues
Species occurrence record includes scientific name and no explicit species concept
GBIF in future should use services from a shared catalogue to get the best concept (and to add it if not already included)
Catalogues with compatible services form an ecosystem to organise access to distributed biodiversity information
Catalogues are also best place of offer tools and services to support and organise annotations and corrections
GBIF AND GLOBALLY CONNECTED DATA
- Open biodiversity information international perspectives
- Slide Number 2
- Slide Number 3
- Slide Number 4
- Slide Number 5
- Slide Number 6
- Slide Number 7
- Slide Number 8
- Types of data shared through GBIF
- GBIF BY THE NUMBERS
- Data published through GBIforg
- Data publishers
- Visits to GBIForg by Country
- Data download requests by country
- Citations in peer-reviewed research
- Research examples
- GBIF and Digital Object Identifiers
- Slide Number 18
- Slide Number 19
- GBIF and digital object identifiers
- GBIF and digital object identifiers
- Publishing data from research
- Publishing data from research
- Slide Number 24
- Slide Number 25
- Slide Number 26
- Slide Number 27
- Slide Number 28
- Datamdashby GBIF participant
- Slide Number 30
- Slide Number 31
- Concern ndash Prescence-only data
- Slide Number 33
- sample-based data
- sample-based data
- Slide Number 36
-
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-06 12 individuals 1 km Butterfly transect
Vanessa cardui PlotB-2014-06 8 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-06 3 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Vanessa cardui PlotA-2014-06 6 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-06 4 individuals 1 km Butterfly transect
Inachis io PlotA-2014-06 1 individual 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-07 15 individuals 1 km Butterfly transect
Vanessa cardui PlotB-2014-07 4 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-07 1 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-08 8 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-08 2 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Platichthys flesus DiveX-20120301 3 individuals 500 m2 Fish dive survey
Sprattus sprattus DiveX-20120301 71 individuals 500 m2 Fish dive survey
Species Event Quantity Sample size Protocol
Vanessa cardui PlotA-2014-07 3 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-07 8 individuals 1 km Butterfly transect
Thecla betulae PlotA-2014-07 2 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotA-2014-08 1 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-08 3 individuals 1 km Butterfly transect
Comparable
Not comparable
EXTENDING GBIF FOR SAMPLE-BASED DATA
SAMPLE-BASED DATA
httpwwwgbiforgpage82105
SAMPLE-BASED DATA
httpeubon-iptgbiforgresourcedor=butterflies-monitoring-scheme-il
Taxon Concept Institution Collection
Taxon Name
Publication
Species Occurrence
Sequence
GBIF Data Index
Catalogue of Life
Conceptual biodiversity data model
Published data sets
Institution Catalogue
Collection Catalogue
Taxon Concept Catalogue
Taxon Name Catalogue
Publication Catalogue
Species Occurrence Catalogue
Sequence Catalogue Comprehensive
service-centred catalogues
Species occurrence record includes scientific name and no explicit species concept
GBIF in future should use services from a shared catalogue to get the best concept (and to add it if not already included)
Catalogues with compatible services form an ecosystem to organise access to distributed biodiversity information
Catalogues are also best place of offer tools and services to support and organise annotations and corrections
GBIF AND GLOBALLY CONNECTED DATA
- Open biodiversity information international perspectives
- Slide Number 2
- Slide Number 3
- Slide Number 4
- Slide Number 5
- Slide Number 6
- Slide Number 7
- Slide Number 8
- Types of data shared through GBIF
- GBIF BY THE NUMBERS
- Data published through GBIforg
- Data publishers
- Visits to GBIForg by Country
- Data download requests by country
- Citations in peer-reviewed research
- Research examples
- GBIF and Digital Object Identifiers
- Slide Number 18
- Slide Number 19
- GBIF and digital object identifiers
- GBIF and digital object identifiers
- Publishing data from research
- Publishing data from research
- Slide Number 24
- Slide Number 25
- Slide Number 26
- Slide Number 27
- Slide Number 28
- Datamdashby GBIF participant
- Slide Number 30
- Slide Number 31
- Concern ndash Prescence-only data
- Slide Number 33
- sample-based data
- sample-based data
- Slide Number 36
-
SAMPLE-BASED DATA
httpwwwgbiforgpage82105
SAMPLE-BASED DATA
httpeubon-iptgbiforgresourcedor=butterflies-monitoring-scheme-il
Taxon Concept Institution Collection
Taxon Name
Publication
Species Occurrence
Sequence
GBIF Data Index
Catalogue of Life
Conceptual biodiversity data model
Published data sets
Institution Catalogue
Collection Catalogue
Taxon Concept Catalogue
Taxon Name Catalogue
Publication Catalogue
Species Occurrence Catalogue
Sequence Catalogue Comprehensive
service-centred catalogues
Species occurrence record includes scientific name and no explicit species concept
GBIF in future should use services from a shared catalogue to get the best concept (and to add it if not already included)
Catalogues with compatible services form an ecosystem to organise access to distributed biodiversity information
Catalogues are also best place of offer tools and services to support and organise annotations and corrections
GBIF AND GLOBALLY CONNECTED DATA
- Open biodiversity information international perspectives
- Slide Number 2
- Slide Number 3
- Slide Number 4
- Slide Number 5
- Slide Number 6
- Slide Number 7
- Slide Number 8
- Types of data shared through GBIF
- GBIF BY THE NUMBERS
- Data published through GBIforg
- Data publishers
- Visits to GBIForg by Country
- Data download requests by country
- Citations in peer-reviewed research
- Research examples
- GBIF and Digital Object Identifiers
- Slide Number 18
- Slide Number 19
- GBIF and digital object identifiers
- GBIF and digital object identifiers
- Publishing data from research
- Publishing data from research
- Slide Number 24
- Slide Number 25
- Slide Number 26
- Slide Number 27
- Slide Number 28
- Datamdashby GBIF participant
- Slide Number 30
- Slide Number 31
- Concern ndash Prescence-only data
- Slide Number 33
- sample-based data
- sample-based data
- Slide Number 36
-
SAMPLE-BASED DATA
httpeubon-iptgbiforgresourcedor=butterflies-monitoring-scheme-il
Taxon Concept Institution Collection
Taxon Name
Publication
Species Occurrence
Sequence
GBIF Data Index
Catalogue of Life
Conceptual biodiversity data model
Published data sets
Institution Catalogue
Collection Catalogue
Taxon Concept Catalogue
Taxon Name Catalogue
Publication Catalogue
Species Occurrence Catalogue
Sequence Catalogue Comprehensive
service-centred catalogues
Species occurrence record includes scientific name and no explicit species concept
GBIF in future should use services from a shared catalogue to get the best concept (and to add it if not already included)
Catalogues with compatible services form an ecosystem to organise access to distributed biodiversity information
Catalogues are also best place of offer tools and services to support and organise annotations and corrections
GBIF AND GLOBALLY CONNECTED DATA
- Open biodiversity information international perspectives
- Slide Number 2
- Slide Number 3
- Slide Number 4
- Slide Number 5
- Slide Number 6
- Slide Number 7
- Slide Number 8
- Types of data shared through GBIF
- GBIF BY THE NUMBERS
- Data published through GBIforg
- Data publishers
- Visits to GBIForg by Country
- Data download requests by country
- Citations in peer-reviewed research
- Research examples
- GBIF and Digital Object Identifiers
- Slide Number 18
- Slide Number 19
- GBIF and digital object identifiers
- GBIF and digital object identifiers
- Publishing data from research
- Publishing data from research
- Slide Number 24
- Slide Number 25
- Slide Number 26
- Slide Number 27
- Slide Number 28
- Datamdashby GBIF participant
- Slide Number 30
- Slide Number 31
- Concern ndash Prescence-only data
- Slide Number 33
- sample-based data
- sample-based data
- Slide Number 36
-
Taxon Concept Institution Collection
Taxon Name
Publication
Species Occurrence
Sequence
GBIF Data Index
Catalogue of Life
Conceptual biodiversity data model
Published data sets
Institution Catalogue
Collection Catalogue
Taxon Concept Catalogue
Taxon Name Catalogue
Publication Catalogue
Species Occurrence Catalogue
Sequence Catalogue Comprehensive
service-centred catalogues
Species occurrence record includes scientific name and no explicit species concept
GBIF in future should use services from a shared catalogue to get the best concept (and to add it if not already included)
Catalogues with compatible services form an ecosystem to organise access to distributed biodiversity information
Catalogues are also best place of offer tools and services to support and organise annotations and corrections
GBIF AND GLOBALLY CONNECTED DATA
- Open biodiversity information international perspectives
- Slide Number 2
- Slide Number 3
- Slide Number 4
- Slide Number 5
- Slide Number 6
- Slide Number 7
- Slide Number 8
- Types of data shared through GBIF
- GBIF BY THE NUMBERS
- Data published through GBIforg
- Data publishers
- Visits to GBIForg by Country
- Data download requests by country
- Citations in peer-reviewed research
- Research examples
- GBIF and Digital Object Identifiers
- Slide Number 18
- Slide Number 19
- GBIF and digital object identifiers
- GBIF and digital object identifiers
- Publishing data from research
- Publishing data from research
- Slide Number 24
- Slide Number 25
- Slide Number 26
- Slide Number 27
- Slide Number 28
- Datamdashby GBIF participant
- Slide Number 30
- Slide Number 31
- Concern ndash Prescence-only data
- Slide Number 33
- sample-based data
- sample-based data
- Slide Number 36
-