Enrichment analysis using CFinder

By NFU Biology Algorithm lab2015.02.03 updat

Download CFinder

• Cfunder官方網址 : http://www.cfinder.org/

• 點選 Download

啟動 CFinder

• 解壓縮後再資料夾點選 start.bat啟動程式

上傳文件• Step 1: click the open

new network button

上傳文件• Step 2 : Choice the file

by click browse button

上傳文件• Step 3 : after Choice the file, click run button.

EX :pathway

結果• We can check

result after process

結果• Here is show of the clique >= 3 and vertices,

edges…

結果• Clique and Edges

結果• And is also can show

of the– Communities– Vertices– Cliques stats – Graph of communities

結果 (Stats)

結果 (Graph of communities)

• The clique link to the other one clique.

結果• If you want to open the

clique file ,you can open the “filename_files_0.0_w_0.0” to find cliques file, and just open by note.